RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 ADAMTS3O15072 1205 aa20.46■□□□□ 0.87
TRAPPC9-211ENST00000521700 KCNA2P16389 499 aa20.46■□□□□ 0.87
TRAPPC9-211ENST00000521700 ANAPC15P60006 121 aa20.46■□□□□ 0.87
TRAPPC9-211ENST00000521700 AKAP17AQ02040 695 aaKnown RBP20.46■□□□□ 0.87
TRAPPC9-211ENST00000521700 VWCEQ96DN2 955 aa20.46■□□□□ 0.87
TRAPPC9-211ENST00000521700 CDHR1Q96JP9 859 aa20.46■□□□□ 0.87
TRAPPC9-211ENST00000521700 SLC26A6Q9BXS9 759 aa20.46■□□□□ 0.87
TRAPPC9-211ENST00000521700 ZMYND12Q9H0C1 365 aa20.46■□□□□ 0.87
TRAPPC9-211ENST00000521700 ESYT2A0FGR8 921 aa20.45■□□□□ 0.86
TRAPPC9-211ENST00000521700 H3BRB1 525 aa20.45■□□□□ 0.86
TRAPPC9-211ENST00000521700 MAFGO15525 162 aa20.45■□□□□ 0.86
TRAPPC9-211ENST00000521700 LGALS2P05162 132 aa20.45■□□□□ 0.86
TRAPPC9-211ENST00000521700 AP3B2Q13367 1082 aa20.45■□□□□ 0.86
TRAPPC9-211ENST00000521700 MTMR1Q13613 665 aa20.45■□□□□ 0.86
TRAPPC9-211ENST00000521700 RASIP1Q5U651 963 aa20.45■□□□□ 0.86
TRAPPC9-211ENST00000521700 JAKMIP3Q5VZ66 844 aa20.45■□□□□ 0.86
TRAPPC9-211ENST00000521700 PSRC1Q6PGN9 363 aaPredicted RBP20.45■□□□□ 0.86
TRAPPC9-211ENST00000521700 Q7L0L9 218 aa20.45■□□□□ 0.86
TRAPPC9-211ENST00000521700 DEFB123Q8N688 67 aa20.45■□□□□ 0.86
TRAPPC9-211ENST00000521700 GIMAP8Q8ND71 665 aaPredicted RBP20.45■□□□□ 0.86
TRAPPC9-211ENST00000521700 CYP2W1Q8TAV3 490 aa20.45■□□□□ 0.86
TRAPPC9-211ENST00000521700 MXRA8Q9BRK3 442 aa20.45■□□□□ 0.86
TRAPPC9-211ENST00000521700 TUT1Q9H6E5 874 aaKnown RBP20.45■□□□□ 0.86
TRAPPC9-211ENST00000521700 SEC24BO95487 1268 aa20.44■□□□□ 0.86
TRAPPC9-211ENST00000521700 FGBP02675 491 aa20.44■□□□□ 0.86
TRAPPC9-211ENST00000521700 SMAD3P84022 425 aaKnown RBP20.44■□□□□ 0.86
TRAPPC9-211ENST00000521700 SP4Q02446 784 aa20.44■□□□□ 0.86
TRAPPC9-211ENST00000521700 HIC1Q14526 733 aa20.44■□□□□ 0.86
TRAPPC9-211ENST00000521700 RPUSD2Q8IZ73 545 aaKnown RBP20.44■□□□□ 0.86
TRAPPC9-211ENST00000521700 RETREG2Q8NC44 543 aa20.44■□□□□ 0.86
TRAPPC9-211ENST00000521700 CCDC12Q8WUD4 166 aaPredicted RBP20.44■□□□□ 0.86
TRAPPC9-211ENST00000521700 C6orf50Q9HD87 102 aa20.44■□□□□ 0.86
TRAPPC9-211ENST00000521700 PKD2L1Q9P0L9 805 aa20.44■□□□□ 0.86
TRAPPC9-211ENST00000521700 TRIP12Q14669 1992 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC9-211ENST00000521700 PITPNM1O00562 1244 aa20.43■□□□□ 0.86
TRAPPC9-211ENST00000521700 IQCF3P0C7M6 154 aa20.43■□□□□ 0.86
TRAPPC9-211ENST00000521700 SREBF1P36956 1147 aa20.43■□□□□ 0.86
TRAPPC9-211ENST00000521700 ZNF200P98182 395 aaPredicted RBP20.43■□□□□ 0.86
TRAPPC9-211ENST00000521700 STK3Q13188 491 aa20.43■□□□□ 0.86
TRAPPC9-211ENST00000521700 BFSP2Q13515 415 aa20.43■□□□□ 0.86
TRAPPC9-211ENST00000521700 HERVK_113Q902F9 699 aa20.43■□□□□ 0.86
TRAPPC9-211ENST00000521700 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.42■□□□□ 0.86
TRAPPC9-211ENST00000521700 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.42■□□□□ 0.86
TRAPPC9-211ENST00000521700 ARP10275 920 aa20.42■□□□□ 0.86
TRAPPC9-211ENST00000521700 GNA11P29992 359 aa20.42■□□□□ 0.86
TRAPPC9-211ENST00000521700 SSRP1Q08945 709 aaKnown RBP20.42■□□□□ 0.86
TRAPPC9-211ENST00000521700 CEP55Q53EZ4 464 aa20.42■□□□□ 0.86
TRAPPC9-211ENST00000521700 UTP14CQ5TAP6 766 aaKnown RBP20.42■□□□□ 0.86
TRAPPC9-211ENST00000521700 FAM109BQ6ICB4 259 aaPredicted RBP20.42■□□□□ 0.86
TRAPPC9-211ENST00000521700 OTOP2Q7RTS6 562 aa20.42■□□□□ 0.86
TRAPPC9-211ENST00000521700 DHX38Q92620 1227 aaKnown RBP20.42■□□□□ 0.86
TRAPPC9-211ENST00000521700 IL17RAQ96F46 866 aa20.42■□□□□ 0.86
TRAPPC9-211ENST00000521700 KCNH7Q9NS40 1196 aa20.42■□□□□ 0.86
TRAPPC9-211ENST00000521700 VPS54Q9P1Q0 977 aa20.42■□□□□ 0.86
TRAPPC9-211ENST00000521700 SCN5AQ14524 2016 aa20.42■□□□□ 0.86
TRAPPC9-211ENST00000521700 GSTTP1A0A1W2PQM5 241 aa20.41■□□□□ 0.86
TRAPPC9-211ENST00000521700 MEIS1O00470 390 aa20.41■□□□□ 0.86
TRAPPC9-211ENST00000521700 CPLX1O14810 134 aa20.41■□□□□ 0.86
TRAPPC9-211ENST00000521700 EIF5BO60841 1220 aaKnown RBP20.41■□□□□ 0.86
TRAPPC9-211ENST00000521700 ARHGAP4P98171 946 aa20.41■□□□□ 0.86
TRAPPC9-211ENST00000521700 DEFB128Q7Z7B8 93 aa20.41■□□□□ 0.86
TRAPPC9-211ENST00000521700 TRIM50Q86XT4 487 aa20.41■□□□□ 0.86
TRAPPC9-211ENST00000521700 TRIM22Q8IYM9 498 aa20.41■□□□□ 0.86
TRAPPC9-211ENST00000521700 REXO1Q8N1G1 1221 aaKnown RBP20.41■□□□□ 0.86
TRAPPC9-211ENST00000521700 CAGE1Q8TC20 777 aa20.41■□□□□ 0.86
TRAPPC9-211ENST00000521700 CRYGNQ8WXF5 182 aa20.41■□□□□ 0.86
TRAPPC9-211ENST00000521700 MTMR10Q9NXD2 777 aa20.41■□□□□ 0.86
TRAPPC9-211ENST00000521700 CXXC1Q9P0U4 656 aaPredicted RBP20.41■□□□□ 0.86
TRAPPC9-211ENST00000521700 TPCN1Q9ULQ1 816 aa20.41■□□□□ 0.86
TRAPPC9-211ENST00000521700 SMIM10L2AP0DMW4 78 aa20.4■□□□□ 0.86
TRAPPC9-211ENST00000521700 SMIM10L2BP0DMW5 78 aa20.4■□□□□ 0.86
TRAPPC9-211ENST00000521700 RFC2P35250 354 aa20.4■□□□□ 0.86
TRAPPC9-211ENST00000521700 TCF7P36402 384 aaPredicted RBP20.4■□□□□ 0.86
TRAPPC9-211ENST00000521700 ZNF76P36508 570 aa20.4■□□□□ 0.86
TRAPPC9-211ENST00000521700 RBL2Q08999 1139 aa20.4■□□□□ 0.86
TRAPPC9-211ENST00000521700 PTK7Q13308 1070 aa20.4■□□□□ 0.86
TRAPPC9-211ENST00000521700 MCTP2Q6DN12 878 aa20.4■□□□□ 0.86
TRAPPC9-211ENST00000521700 CCDC155Q8N6L0 562 aa20.4■□□□□ 0.86
TRAPPC9-211ENST00000521700 CCDC148Q8NFR7 591 aa20.4■□□□□ 0.86
TRAPPC9-211ENST00000521700 AFAP1L1Q8TED9 768 aa20.4■□□□□ 0.86
TRAPPC9-211ENST00000521700 SEPT1Q8WYJ6 367 aa20.4■□□□□ 0.86
TRAPPC9-211ENST00000521700 WNT8BQ93098 351 aa20.4■□□□□ 0.86
TRAPPC9-211ENST00000521700 RNPEPQ9H4A4 650 aa20.4■□□□□ 0.86
TRAPPC9-211ENST00000521700 SH3GLB2Q9NR46 395 aa20.4■□□□□ 0.86
TRAPPC9-211ENST00000521700 C17orf102A2RUQ5 167 aa20.39■□□□□ 0.85
TRAPPC9-211ENST00000521700 GRXCR1A8MXD5 290 aa20.39■□□□□ 0.85
TRAPPC9-211ENST00000521700 PFKMP08237 780 aa20.39■□□□□ 0.85
TRAPPC9-211ENST00000521700 CYP3A4P08684 503 aa20.39■□□□□ 0.85
TRAPPC9-211ENST00000521700 HOXC8P31273 242 aa20.39■□□□□ 0.85
TRAPPC9-211ENST00000521700 SCRN1Q12765 414 aa20.39■□□□□ 0.85
TRAPPC9-211ENST00000521700 TRIM71Q2Q1W2 868 aaKnown RBP20.39■□□□□ 0.85
TRAPPC9-211ENST00000521700 CPLX2Q6PUV4 134 aaKnown RBP20.39■□□□□ 0.85
TRAPPC9-211ENST00000521700 BICD2Q8TD16 824 aa20.39■□□□□ 0.85
TRAPPC9-211ENST00000521700 RASGRP4Q8TDF6 673 aa20.39■□□□□ 0.85
TRAPPC9-211ENST00000521700 AGO4Q9HCK5 861 aaKnown RBP20.39■□□□□ 0.85
TRAPPC9-211ENST00000521700 NFASCO94856 1347 aa20.38■□□□□ 0.85
TRAPPC9-211ENST00000521700 FAM86B1E9PN63 330 aa20.38■□□□□ 0.85
TRAPPC9-211ENST00000521700 PFKFB2O60825 505 aa20.38■□□□□ 0.85
TRAPPC9-211ENST00000521700 DEXIO95424 95 aa20.38■□□□□ 0.85
TRAPPC9-211ENST00000521700 FAM86B2P0C5J1 330 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms