RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 KIAA1217Q5T5P2 1943 aa20.72■□□□□ 0.91
VEGFA-222ENST00000520948 SPDYE3A6NKU9 549 aa20.72■□□□□ 0.91
VEGFA-222ENST00000520948 EIF3JO75822 258 aaKnown RBP20.72■□□□□ 0.91
VEGFA-222ENST00000520948 RGS20O76081 388 aa20.72■□□□□ 0.91
VEGFA-222ENST00000520948 PSMC6P62333 389 aa20.72■□□□□ 0.91
VEGFA-222ENST00000520948 ITGA7Q13683 1181 aa20.72■□□□□ 0.91
VEGFA-222ENST00000520948 JAKMIP3Q5VZ66 844 aa20.72■□□□□ 0.91
VEGFA-222ENST00000520948 PCNX4Q63HM2 1172 aa20.72■□□□□ 0.91
VEGFA-222ENST00000520948 XRRA1Q6P2D8 792 aa20.72■□□□□ 0.91
VEGFA-222ENST00000520948 REXO1Q8N1G1 1221 aaKnown RBP20.72■□□□□ 0.91
VEGFA-222ENST00000520948 ANO3Q9BYT9 981 aa20.72■□□□□ 0.91
VEGFA-222ENST00000520948 HIPK3Q9H422 1215 aa20.72■□□□□ 0.91
VEGFA-222ENST00000520948 GRIN2DO15399 1336 aa20.72■□□□□ 0.91
VEGFA-222ENST00000520948 CCND2P30279 289 aa20.71■□□□□ 0.91
VEGFA-222ENST00000520948 KRT40Q6A162 431 aa20.71■□□□□ 0.91
VEGFA-222ENST00000520948 IQSEC1Q6DN90 963 aa20.71■□□□□ 0.91
VEGFA-222ENST00000520948 SLC43A3Q8NBI5 491 aa20.71■□□□□ 0.91
VEGFA-222ENST00000520948 RASGRP4Q8TDF6 673 aa20.71■□□□□ 0.91
VEGFA-222ENST00000520948 PPM1EQ8WY54 764 aa20.71■□□□□ 0.91
VEGFA-222ENST00000520948 INTS4Q96HW7 963 aaKnown RBP20.71■□□□□ 0.91
VEGFA-222ENST00000520948 PGBD1Q96JS3 809 aa20.71■□□□□ 0.91
VEGFA-222ENST00000520948 TRPV6Q9H1D0 765 aa20.71■□□□□ 0.91
VEGFA-222ENST00000520948 PRDM12Q9H4Q4 367 aa20.71■□□□□ 0.91
VEGFA-222ENST00000520948 IL23AQ9NPF7 189 aa20.71■□□□□ 0.91
VEGFA-222ENST00000520948 CXXC1Q9P0U4 656 aaPredicted RBP20.71■□□□□ 0.91
VEGFA-222ENST00000520948 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.71■□□□□ 0.91
VEGFA-222ENST00000520948 SPTBN5Q9NRC6 3674 aaKnown RBP20.71■□□□□ 0.91
VEGFA-222ENST00000520948 EDIL3O43854 480 aa20.7■□□□□ 0.9
VEGFA-222ENST00000520948 STAM2O75886 525 aa20.7■□□□□ 0.9
VEGFA-222ENST00000520948 CABYRO75952 493 aa20.7■□□□□ 0.9
VEGFA-222ENST00000520948 MMP1P03956 469 aa20.7■□□□□ 0.9
VEGFA-222ENST00000520948 MYCLP12524 364 aaPredicted RBP20.7■□□□□ 0.9
VEGFA-222ENST00000520948 SREBF1P36956 1147 aa20.7■□□□□ 0.9
VEGFA-222ENST00000520948 CCL23P55773 120 aa20.7■□□□□ 0.9
VEGFA-222ENST00000520948 OXER1Q8TDS5 423 aa20.7■□□□□ 0.9
VEGFA-222ENST00000520948 PRDM6Q9NQX0 595 aa20.7■□□□□ 0.9
VEGFA-222ENST00000520948 ZEB2O60315 1214 aa20.69■□□□□ 0.9
VEGFA-222ENST00000520948 B4GALT4O60513 344 aa20.69■□□□□ 0.9
VEGFA-222ENST00000520948 GJB2P29033 226 aa20.69■□□□□ 0.9
VEGFA-222ENST00000520948 CCDC62Q6P9F0 684 aa20.69■□□□□ 0.9
VEGFA-222ENST00000520948 OTOP2Q7RTS6 562 aa20.69■□□□□ 0.9
VEGFA-222ENST00000520948 FBXO18Q8NFZ0 1043 aa20.69■□□□□ 0.9
VEGFA-222ENST00000520948 TNFRSF25Q93038 417 aa20.69■□□□□ 0.9
VEGFA-222ENST00000520948 ZFP91Q96JP5 570 aaPredicted RBP20.69■□□□□ 0.9
VEGFA-222ENST00000520948 INPP4AQ96PE3 977 aaPredicted RBP20.69■□□□□ 0.9
VEGFA-222ENST00000520948 GAS2L1Q99501 681 aaPredicted RBP20.69■□□□□ 0.9
VEGFA-222ENST00000520948 EHMT1Q9H9B1 1298 aa20.69■□□□□ 0.9
VEGFA-222ENST00000520948 CYP3A4P08684 503 aa20.68■□□□□ 0.9
VEGFA-222ENST00000520948 FAM184AQ8NB25 1140 aa20.68■□□□□ 0.9
VEGFA-222ENST00000520948 HERVK_113Q902F9 699 aa20.68■□□□□ 0.9
VEGFA-222ENST00000520948 C8orf76Q96K31 380 aa20.68■□□□□ 0.9
VEGFA-222ENST00000520948 NOC4LQ9BVI4 516 aaKnown RBP20.68■□□□□ 0.9
VEGFA-222ENST00000520948 WNT8AQ9H1J5 351 aa20.68■□□□□ 0.9
VEGFA-222ENST00000520948 SMC3Q9UQE7 1217 aa20.68■□□□□ 0.9
VEGFA-222ENST00000520948 UBIAD1Q9Y5Z9 338 aa20.68■□□□□ 0.9
VEGFA-222ENST00000520948 MYH7BA7E2Y1 1941 aa20.68■□□□□ 0.9
VEGFA-222ENST00000520948 FGBP02675 491 aa20.67■□□□□ 0.9
VEGFA-222ENST00000520948 ICAM3P32942 547 aa20.67■□□□□ 0.9
VEGFA-222ENST00000520948 ARHGAP4P98171 946 aa20.67■□□□□ 0.9
VEGFA-222ENST00000520948 HSCBQ8IWL3 235 aa20.67■□□□□ 0.9
VEGFA-222ENST00000520948 SCFD2Q8WU76 684 aa20.67■□□□□ 0.9
VEGFA-222ENST00000520948 WDR11Q9BZH6 1224 aa20.67■□□□□ 0.9
VEGFA-222ENST00000520948 NKX2-4Q9H2Z4 354 aa20.67■□□□□ 0.9
VEGFA-222ENST00000520948 RTEL1Q9NZ71 1219 aa20.67■□□□□ 0.9
VEGFA-222ENST00000520948 MSRAQ9UJ68 235 aa20.67■□□□□ 0.9
VEGFA-222ENST00000520948 BTBD18B2RXH4 712 aa20.66■□□□□ 0.9
VEGFA-222ENST00000520948 ARIH2O95376 493 aa20.66■□□□□ 0.9
VEGFA-222ENST00000520948 KRT2P35908 639 aa20.66■□□□□ 0.9
VEGFA-222ENST00000520948 TRIM29Q14134 588 aa20.66■□□□□ 0.9
VEGFA-222ENST00000520948 RAB30Q15771 203 aa20.66■□□□□ 0.9
VEGFA-222ENST00000520948 DUSP28Q4G0W2 176 aa20.66■□□□□ 0.9
VEGFA-222ENST00000520948 SEPT14Q6ZU15 432 aa20.66■□□□□ 0.9
VEGFA-222ENST00000520948 KRT25Q7Z3Z0 450 aa20.66■□□□□ 0.9
VEGFA-222ENST00000520948 SYMPKQ92797 1274 aaKnown RBP20.66■□□□□ 0.9
VEGFA-222ENST00000520948 SCLYQ96I15 445 aa20.66■□□□□ 0.9
VEGFA-222ENST00000520948 MTIF3Q9H2K0 278 aaKnown RBP20.66■□□□□ 0.9
VEGFA-222ENST00000520948 DDX41Q9UJV9 622 aaKnown RBP20.66■□□□□ 0.9
VEGFA-222ENST00000520948 YBX2Q9Y2T7 364 aaKnown RBP20.66■□□□□ 0.9
VEGFA-222ENST00000520948 Q9Y3F1 56 aa20.66■□□□□ 0.9
VEGFA-222ENST00000520948 KIF3AQ9Y496 699 aa20.66■□□□□ 0.9
VEGFA-222ENST00000520948 SPATA31C2B4DYI2 1134 aa20.65■□□□□ 0.9
VEGFA-222ENST00000520948 TGFB3P10600 412 aa20.65■□□□□ 0.9
VEGFA-222ENST00000520948 ITGB5P18084 799 aa20.65■□□□□ 0.9
VEGFA-222ENST00000520948 CIITAP33076 1130 aa20.65■□□□□ 0.9
VEGFA-222ENST00000520948 USP11P51784 963 aa20.65■□□□□ 0.9
VEGFA-222ENST00000520948 FOSBP53539 338 aa20.65■□□□□ 0.9
VEGFA-222ENST00000520948 GUCY1B3Q02153 619 aa20.65■□□□□ 0.9
VEGFA-222ENST00000520948 SEMA3FQ13275 785 aa20.65■□□□□ 0.9
VEGFA-222ENST00000520948 NR5A1Q13285 461 aa20.65■□□□□ 0.9
VEGFA-222ENST00000520948 ADGRE1Q14246 886 aa20.65■□□□□ 0.9
VEGFA-222ENST00000520948 EARS2Q5JPH6 523 aaKnown RBP20.65■□□□□ 0.9
VEGFA-222ENST00000520948 TJAP1Q5JTD0 557 aa20.65■□□□□ 0.9
VEGFA-222ENST00000520948 DIS3L2Q8IYB7 885 aaKnown RBP20.65■□□□□ 0.9
VEGFA-222ENST00000520948 TBCKQ8TEA7 893 aa20.65■□□□□ 0.9
VEGFA-222ENST00000520948 MXRA8Q9BRK3 442 aa20.65■□□□□ 0.9
VEGFA-222ENST00000520948 SCN5AQ14524 2016 aa20.65■□□□□ 0.9
VEGFA-222ENST00000520948 MYO9BQ13459 2157 aa20.64■□□□□ 0.89
VEGFA-222ENST00000520948 MEIS1O00470 390 aa20.64■□□□□ 0.89
VEGFA-222ENST00000520948 NKRFO15226 690 aaKnown RBP eCLIP20.64■□□□□ 0.894e-7■□□□□ 10.1
VEGFA-222ENST00000520948 MAFGO15525 162 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms