RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 ERVK-9P63128 1117 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 DDR1Q08345 913 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 LETM2Q2VYF4 491 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 LONP2Q86WA8 852 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 FNBP4Q8N3X1 1017 aaPredicted RBP11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 NBPF15Q8N660 670 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 CUL5Q93034 780 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 NACAP1Q9BZK3 213 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 ABCF3Q9NUQ8 709 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 PXDNQ92626 1479 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 USP31Q70CQ4 1352 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 RAD21O60216 631 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 MMEP08473 750 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 CYP11B2P19099 503 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 SLC8A1P32418 973 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 ITGB3BPQ13352 177 aaPredicted RBP11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 TAF11Q15544 211 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 IL17AQ16552 155 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 MAP7D1Q3KQU3 841 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 GALNT17Q6IS24 598 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 HEATR3Q7Z4Q2 680 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 FAM133AQ8N9E0 248 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 SLC52A2Q9HAB3 445 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 DNAAF2Q9NVR5 837 aaKnown RBP11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 RMND1Q9NWS8 449 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 NUB1Q9Y5A7 615 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 PTPRUQ92729 1446 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 CEMIPQ8WUJ3 1361 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 KRIT1O00522 736 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 KRT13P13646 458 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 CYP7A1P22680 504 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 ITGA6P23229 1130 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 PPP2R2AP63151 447 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 MXRA7P84157 204 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 TCERG1LQ5VWI1 586 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 RCSD1Q6JBY9 416 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 NANOGNBQ7Z5D8 188 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 APBB1IPQ7Z5R6 666 aaPredicted RBP11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 LRRC34Q8IZ02 419 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 IQCKQ8N0W5 287 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 PLBD2Q8NHP8 589 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 CCDC47Q96A33 483 aaKnown RBP11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 STRBPQ96SI9 672 aaKnown RBP11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 MTFR1LQ9H019 292 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 ARHGEF10LQ9HCE6 1279 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 SAMD15Q9P1V8 674 aa11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 RABL2AQ9UBK7 228 aaPredicted RBP11.03□□□□□ -0.64
PDGFRB-207ENST00000520579 ZNF24P17028 368 aa11.02□□□□□ -0.64
PDGFRB-207ENST00000520579 ZNF211Q13398 564 aaPredicted RBP11.02□□□□□ -0.64
PDGFRB-207ENST00000520579 DTHD1Q6ZMT9 781 aa11.02□□□□□ -0.64
PDGFRB-207ENST00000520579 ERICH1Q86X53 443 aa11.02□□□□□ -0.64
PDGFRB-207ENST00000520579 KLHL29Q96CT2 875 aa11.02□□□□□ -0.64
PDGFRB-207ENST00000520579 RBM17Q96I25 401 aaKnown RBP11.02□□□□□ -0.64
PDGFRB-207ENST00000520579 DNAJC7Q99615 494 aa11.02□□□□□ -0.64
PDGFRB-207ENST00000520579 TMEM60Q9H2L4 133 aa11.02□□□□□ -0.64
PDGFRB-207ENST00000520579 HOMER3Q9NSC5 361 aa11.02□□□□□ -0.64
PDGFRB-207ENST00000520579 ITIH6Q6UXX5 1313 aa11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 TTI1O43156 1089 aa11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 TRIM37O94972 964 aa11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 GOLGA8HP0CJ92 632 aa11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 PLTPP55058 493 aa11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 TNNC1P63316 161 aa11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 GLIS3Q8NEA6 775 aa11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 PRMT1Q99873 361 aaKnown RBP11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 LSM14BQ9BX40 385 aaKnown RBP11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 UBA5Q9GZZ9 404 aa11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 TRPC6Q9Y210 931 aa11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 BCS1LQ9Y276 419 aa11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 FAM237AA0A1B0GTK4 181 aa11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 HMGB1P1B2RPK0 211 aaPredicted RBP11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 CHN1P15882 459 aa11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 LMNB1P20700 586 aa11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 ABCB4P21439 1286 aa11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 TECP42680 631 aa11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 ABL2P42684 1182 aa11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 RPS6KA1Q15418 735 aa11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 RABL6Q3YEC7 729 aaPredicted RBP11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 KLHDC7AQ5VTJ3 777 aa11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 SFMBT2Q5VUG0 894 aa11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 ANKS4BQ8N8V4 417 aa11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 GJA10Q969M2 543 aa11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 CHORDC1Q9UHD1 332 aaPredicted RBP11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 BZW2Q9Y6E2 419 aaKnown RBP11.02□□□□□ -0.65
PDGFRB-207ENST00000520579 RASSF10A6NK89 507 aa11.01□□□□□ -0.65
PDGFRB-207ENST00000520579 IGF2BP3O00425 579 aaKnown RBP eCLIP11.01□□□□□ -0.65
PDGFRB-207ENST00000520579 DESP17661 470 aa11.01□□□□□ -0.65
PDGFRB-207ENST00000520579 ZNF844Q08AG5 666 aa11.01□□□□□ -0.65
PDGFRB-207ENST00000520579 CCDC92Q53HC0 331 aaPredicted RBP11.01□□□□□ -0.65
PDGFRB-207ENST00000520579 BZW1Q7L1Q6 419 aaKnown RBP11.01□□□□□ -0.65
PDGFRB-207ENST00000520579 ADSSL1Q8N142 457 aa11.01□□□□□ -0.65
PDGFRB-207ENST00000520579 RETREG2Q8NC44 543 aa11.01□□□□□ -0.65
PDGFRB-207ENST00000520579 TRIM7Q9C029 511 aa11.01□□□□□ -0.65
PDGFRB-207ENST00000520579 AZI2Q9H6S1 392 aa11.01□□□□□ -0.65
PDGFRB-207ENST00000520579 ACTR5Q9H9F9 607 aaPredicted RBP11.01□□□□□ -0.65
PDGFRB-207ENST00000520579 DBR1Q9UK59 544 aaKnown RBP11.01□□□□□ -0.65
PDGFRB-207ENST00000520579 UTYO14607 1347 aa11.01□□□□□ -0.65
PDGFRB-207ENST00000520579 ANO9A1A5B4 782 aa11.01□□□□□ -0.65
PDGFRB-207ENST00000520579 TRAF5O00463 557 aa11.01□□□□□ -0.65
PDGFRB-207ENST00000520579 UBOX5O94941 541 aa11.01□□□□□ -0.65
PDGFRB-207ENST00000520579 BCAMP50895 628 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms