RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 CNTNAP5Q8WYK1 1306 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 A0A1W2PQC6 194 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 ERICH4A6NGS2 130 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 SOWAHDA6NJG2 315 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 PSMA7O14818 248 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 IVLP07476 585 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 SCG2P13521 617 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 CYP2B6P20813 491 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 STAT6P42226 847 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 AFMP43652 599 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 COPB1P53618 953 aaKnown RBP9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 RHBDL3P58872 404 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 NLRP5P59047 1200 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 KRT83P78385 493 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 RBL2Q08999 1139 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 LONRF2Q1L5Z9 754 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 ZNF569Q5MCW4 686 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 WWC2Q6AWC2 1192 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 LEKR1Q6ZMV7 388 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 NECAB2Q7Z6G3 386 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 TEX11Q8IYF3 940 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 ENAHQ8N8S7 591 aaPredicted RBP9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 MIGA1Q8NAN2 632 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 LRRN4CLQ8ND94 238 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 PXYLP1Q8TE99 480 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 RUBCNQ92622 972 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 NUP88Q99567 741 aaPredicted RBP9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 DESI2Q9BSY9 194 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 NUP58Q9BVL2 599 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 PARD6BQ9BYG5 372 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 UBXN6Q9BZV1 441 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 ABHD10Q9NUJ1 306 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 RAB21Q9UL25 225 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 LAMA3Q16787 3333 aa9.63□□□□□ -0.87
CTNNA1-223ENST00000520520 GPR75-ASB3A0A0A6YYF3 556 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 BICDL2A1A5D9 508 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 KCNJ18B7U540 433 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 PPP1R3GB7ZBB8 358 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 DLL1O00548 723 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 PRKAB2O43741 272 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 HMGCRP04035 888 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 FGRP09769 529 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 CYLC1P35663 651 aaPredicted RBP9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 IRX3P78415 501 aaPredicted RBP9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 GOLGA8FQ08AF8 430 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 GOLGA8DPQ0D2H9 430 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 ORC2Q13416 577 aaPredicted RBP9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 IRF5Q13568 498 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 MTMR2Q13614 643 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 KCNJ12Q14500 433 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 RRP1BQ14684 758 aaKnown RBP9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 KCNB1Q14721 858 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 FAM110CQ1W6H9 321 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 HSP90AA4PQ58FG1 418 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 CERS3Q8IU89 383 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 GRAMD1CQ8IYS0 662 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 RETREG2Q8NC44 543 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 ZNF280CQ8ND82 737 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 RASSF8Q8NHQ8 419 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 GOLGA5Q8TBA6 731 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 OXER1Q8TDS5 423 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 SH3RF3Q8TEJ3 882 aaPredicted RBP9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 ZNF384Q8TF68 577 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 NELFBQ8WX92 580 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 TRIM34Q9BYJ4 488 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 TSGA10Q9BZW7 698 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 ASCC2Q9H1I8 757 aaPredicted RBP9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 THAP9Q9H5L6 903 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 HAUS4Q9H6D7 363 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 MRPL44Q9H9J2 332 aaKnown RBP9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 MED4Q9NPJ6 270 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 LZTFL1Q9NQ48 299 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 PAK6Q9NQU5 681 aaPredicted RBP9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 ATP8A2Q9NTI2 1148 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 SLC45A1Q9Y2W3 748 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 ALPK3Q96L96 1907 aa9.62□□□□□ -0.87
CTNNA1-223ENST00000520520 DOCK3Q8IZD9 2030 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 C2orf72A6NCS6 295 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 USP17L5A8MUK1 530 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 LGALS16A8MUM7 142 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 POLR3GO15318 223 aaPredicted RBP9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 GDF11O95390 407 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 RPN1P04843 607 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 GYPCP04921 128 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 LDHCP07864 332 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 CASP14P31944 242 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 GSTO1P78417 241 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 GRIN1Q05586 938 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 FUT2Q10981 343 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 PTGDRQ13258 359 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 PABPC4Q13310 644 aaKnown RBP eCLIP9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 KRT31Q15323 416 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 ZYXQ15942 572 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 E2F4Q16254 413 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 PKN1Q16512 942 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 PFKFB3Q16875 520 aaPredicted RBP9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 SHROOM1Q2M3G4 852 aaPredicted RBP9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 TCP11X2Q5H9J9 407 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 RAD9BQ6WBX8 426 aa9.61□□□□□ -0.87
CTNNA1-223ENST00000520520 ZNF662Q6ZS27 426 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms