RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 TLL1O43897 1013 aa18.52■□□□□ 0.56
IGHV3-42-201ENST00000520410 BAIAP3O94812 1187 aa18.52■□□□□ 0.56
IGHV3-42-201ENST00000520410 CTSHP09668 335 aa18.52■□□□□ 0.56
IGHV3-42-201ENST00000520410 SMIM10L2AP0DMW4 78 aa18.52■□□□□ 0.56
IGHV3-42-201ENST00000520410 SMIM10L2BP0DMW5 78 aa18.52■□□□□ 0.56
IGHV3-42-201ENST00000520410 ICAM3P32942 547 aa18.52■□□□□ 0.56
IGHV3-42-201ENST00000520410 ADCK5Q3MIX3 580 aa18.52■□□□□ 0.56
IGHV3-42-201ENST00000520410 ZNF618Q5T7W0 954 aa18.52■□□□□ 0.56
IGHV3-42-201ENST00000520410 CNKSR3Q6P9H4 555 aa18.52■□□□□ 0.56
IGHV3-42-201ENST00000520410 SGMS1Q86VZ5 419 aa18.52■□□□□ 0.56
IGHV3-42-201ENST00000520410 VWCEQ96DN2 955 aa18.52■□□□□ 0.56
IGHV3-42-201ENST00000520410 C16orf70Q9BSU1 422 aa18.52■□□□□ 0.56
IGHV3-42-201ENST00000520410 USP26Q9BXU7 913 aa18.52■□□□□ 0.56
IGHV3-42-201ENST00000520410 CNTNAP5Q8WYK1 1306 aa18.51■□□□□ 0.55
IGHV3-42-201ENST00000520410 PARNO95453 639 aaKnown RBP18.51■□□□□ 0.55
IGHV3-42-201ENST00000520410 MTMR1Q13613 665 aa18.51■□□□□ 0.55
IGHV3-42-201ENST00000520410 SKIV2LQ15477 1246 aaKnown RBP18.51■□□□□ 0.55
IGHV3-42-201ENST00000520410 FAM117BQ6P1L5 589 aa18.51■□□□□ 0.55
IGHV3-42-201ENST00000520410 XRRA1Q6P2D8 792 aa18.51■□□□□ 0.55
IGHV3-42-201ENST00000520410 HERC6Q8IVU3 1022 aa18.51■□□□□ 0.55
IGHV3-42-201ENST00000520410 RASEFQ8IZ41 740 aa18.51■□□□□ 0.55
IGHV3-42-201ENST00000520410 USP38Q8NB14 1042 aa18.51■□□□□ 0.55
IGHV3-42-201ENST00000520410 GIMAP8Q8ND71 665 aaPredicted RBP18.51■□□□□ 0.55
IGHV3-42-201ENST00000520410 CDHR1Q96JP9 859 aa18.51■□□□□ 0.55
IGHV3-42-201ENST00000520410 PGBD1Q96JS3 809 aa18.51■□□□□ 0.55
IGHV3-42-201ENST00000520410 JAKMIP1Q96N16 626 aaKnown RBP18.51■□□□□ 0.55
IGHV3-42-201ENST00000520410 CTAGE1Q96RT6 745 aa18.51■□□□□ 0.55
IGHV3-42-201ENST00000520410 GPR20Q99678 358 aa18.51■□□□□ 0.55
IGHV3-42-201ENST00000520410 PCDHA6Q9UN73 950 aa18.51■□□□□ 0.55
IGHV3-42-201ENST00000520410 PCDHA8Q9Y5H6 950 aa18.51■□□□□ 0.55
IGHV3-42-201ENST00000520410 HMGB1P09429 215 aaKnown RBP18.5■□□□□ 0.55
IGHV3-42-201ENST00000520410 GNAT1P11488 350 aa18.5■□□□□ 0.55
IGHV3-42-201ENST00000520410 HOXD8P13378 290 aaPredicted RBP18.5■□□□□ 0.55
IGHV3-42-201ENST00000520410 CPA1P15085 419 aa18.5■□□□□ 0.55
IGHV3-42-201ENST00000520410 MARK3P27448 753 aa18.5■□□□□ 0.55
IGHV3-42-201ENST00000520410 ADCY7P51828 1080 aa18.5■□□□□ 0.55
IGHV3-42-201ENST00000520410 WDR5P61964 334 aaKnown RBP18.5■□□□□ 0.55
IGHV3-42-201ENST00000520410 ARHGAP4P98171 946 aa18.5■□□□□ 0.55
IGHV3-42-201ENST00000520410 SEMA3FQ13275 785 aa18.5■□□□□ 0.55
IGHV3-42-201ENST00000520410 WWC2Q6AWC2 1192 aa18.5■□□□□ 0.55
IGHV3-42-201ENST00000520410 TMCO2Q7Z6W1 182 aaPredicted RBP18.5■□□□□ 0.55
IGHV3-42-201ENST00000520410 PHOSPHO2Q8TCD6 241 aa18.5■□□□□ 0.55
IGHV3-42-201ENST00000520410 ARNTL2Q8WYA1 636 aa18.5■□□□□ 0.55
IGHV3-42-201ENST00000520410 WNT8BQ93098 351 aa18.5■□□□□ 0.55
IGHV3-42-201ENST00000520410 GPRASP2Q96D09 838 aa18.5■□□□□ 0.55
IGHV3-42-201ENST00000520410 COL25A1Q9BXS0 654 aaPredicted RBP18.5■□□□□ 0.55
IGHV3-42-201ENST00000520410 SETD4Q9NVD3 440 aa18.5■□□□□ 0.55
IGHV3-42-201ENST00000520410 BRPF3Q9ULD4 1205 aa18.5■□□□□ 0.55
IGHV3-42-201ENST00000520410 RSPH10B2B2RC85 870 aa18.49■□□□□ 0.55
IGHV3-42-201ENST00000520410 TREHO43280 583 aa18.49■□□□□ 0.55
IGHV3-42-201ENST00000520410 GTPBP6O43824 516 aaPredicted RBP18.49■□□□□ 0.55
IGHV3-42-201ENST00000520410 NBNO60934 754 aa18.49■□□□□ 0.55
IGHV3-42-201ENST00000520410 RSPH10BP0C881 870 aa18.49■□□□□ 0.55
IGHV3-42-201ENST00000520410 TCF7P36402 384 aaPredicted RBP18.49■□□□□ 0.55
IGHV3-42-201ENST00000520410 METAP2P50579 478 aaKnown RBP eCLIP18.49■□□□□ 0.55
IGHV3-42-201ENST00000520410 IKBKEQ14164 716 aa18.49■□□□□ 0.55
IGHV3-42-201ENST00000520410 HIC1Q14526 733 aa18.49■□□□□ 0.55
IGHV3-42-201ENST00000520410 IL27Q8NEV9 243 aa18.49■□□□□ 0.55
IGHV3-42-201ENST00000520410 GLG1Q92896 1179 aa18.49■□□□□ 0.55
IGHV3-42-201ENST00000520410 V9GY48 417 aaPredicted RBP18.49■□□□□ 0.55
IGHV3-42-201ENST00000520410 RBAK-RBAKDNI3L0D1 243 aa18.48■□□□□ 0.55
IGHV3-42-201ENST00000520410 RFXAPO00287 272 aa18.48■□□□□ 0.55
IGHV3-42-201ENST00000520410 ZNF76P36508 570 aa18.48■□□□□ 0.55
IGHV3-42-201ENST00000520410 DEFB103AP81534 67 aa18.48■□□□□ 0.55
IGHV3-42-201ENST00000520410 APOBRQ0VD83 1088 aa18.48■□□□□ 0.55
IGHV3-42-201ENST00000520410 ADGRE1Q14246 886 aa18.48■□□□□ 0.55
IGHV3-42-201ENST00000520410 BLOC1S2Q6QNY1 142 aa18.48■□□□□ 0.55
IGHV3-42-201ENST00000520410 Q6ZUG5 572 aa18.48■□□□□ 0.55
IGHV3-42-201ENST00000520410 RNPEPQ9H4A4 650 aa18.48■□□□□ 0.55
IGHV3-42-201ENST00000520410 PRDM6Q9NQX0 595 aa18.48■□□□□ 0.55
IGHV3-42-201ENST00000520410 TELO2Q9Y4R8 837 aa18.48■□□□□ 0.55
IGHV3-42-201ENST00000520410 DOCK5Q9H7D0 1870 aa18.48■□□□□ 0.55
IGHV3-42-201ENST00000520410 EMSYQ7Z589 1322 aa18.48■□□□□ 0.55
IGHV3-42-201ENST00000520410 LGR5O75473 907 aa18.47■□□□□ 0.55
IGHV3-42-201ENST00000520410 EXOSC10Q01780 885 aaKnown RBP18.47■□□□□ 0.55
IGHV3-42-201ENST00000520410 RBL2Q08999 1139 aa18.47■□□□□ 0.55
IGHV3-42-201ENST00000520410 SERINC5Q86VE9 423 aa18.47■□□□□ 0.55
IGHV3-42-201ENST00000520410 BRF1Q92994 677 aa18.47■□□□□ 0.55
IGHV3-42-201ENST00000520410 SENP7Q9BQF6 1050 aa18.47■□□□□ 0.55
IGHV3-42-201ENST00000520410 TSPYL2Q9H2G4 693 aaPredicted RBP18.47■□□□□ 0.55
IGHV3-42-201ENST00000520410 MTUS1Q9ULD2 1270 aa18.47■□□□□ 0.55
IGHV3-42-201ENST00000520410 ABHD14A-ACY1A0A1B0GW23 586 aa18.46■□□□□ 0.55
IGHV3-42-201ENST00000520410 SMCO2A6NFE2 343 aa18.46■□□□□ 0.55
IGHV3-42-201ENST00000520410 EFCAB14O75071 495 aa18.46■□□□□ 0.55
IGHV3-42-201ENST00000520410 ATP9AO75110 1047 aa18.46■□□□□ 0.55
IGHV3-42-201ENST00000520410 ITGB5P18084 799 aa18.46■□□□□ 0.55
IGHV3-42-201ENST00000520410 IGBP1P78318 339 aa18.46■□□□□ 0.55
IGHV3-42-201ENST00000520410 AKAP17AQ02040 695 aaKnown RBP18.46■□□□□ 0.55
IGHV3-42-201ENST00000520410 TRIM71Q2Q1W2 868 aaKnown RBP18.46■□□□□ 0.55
IGHV3-42-201ENST00000520410 PPP1R18Q6NYC8 613 aa18.46■□□□□ 0.55
IGHV3-42-201ENST00000520410 MYOCDQ8IZQ8 938 aa18.46■□□□□ 0.55
IGHV3-42-201ENST00000520410 SDF4Q9BRK5 362 aa18.46■□□□□ 0.55
IGHV3-42-201ENST00000520410 ANO3Q9BYT9 981 aa18.46■□□□□ 0.55
IGHV3-42-201ENST00000520410 THEGQ9P2T0 379 aa18.46■□□□□ 0.55
IGHV3-42-201ENST00000520410 COL6A3P12111 3177 aa18.45■□□□□ 0.54
IGHV3-42-201ENST00000520410 TRIP12Q14669 1992 aaPredicted RBP18.45■□□□□ 0.54
IGHV3-42-201ENST00000520410 CCDC196A0A1B0GTZ2 297 aa18.45■□□□□ 0.54
IGHV3-42-201ENST00000520410 hCG_1984214I3L0E3 225 aa18.45■□□□□ 0.54
IGHV3-42-201ENST00000520410 REC8O95072 547 aa18.45■□□□□ 0.54
IGHV3-42-201ENST00000520410 CXCL10P02778 98 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms