RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.1■□□□□ 0.81
SDC2-205ENST00000520233 SEPT4O43236 478 aa20.1■□□□□ 0.81
SDC2-205ENST00000520233 GAS7O60861 476 aa20.1■□□□□ 0.81
SDC2-205ENST00000520233 SMPD1P17405 629 aa20.1■□□□□ 0.81
SDC2-205ENST00000520233 TXKP42681 527 aa20.1■□□□□ 0.81
SDC2-205ENST00000520233 TNFAIP2Q03169 654 aa20.1■□□□□ 0.81
SDC2-205ENST00000520233 SLC9C1Q4G0N8 1177 aa20.1■□□□□ 0.81
SDC2-205ENST00000520233 LRCH2Q5VUJ6 765 aa20.1■□□□□ 0.81
SDC2-205ENST00000520233 DTHD1Q6ZMT9 781 aa20.1■□□□□ 0.81
SDC2-205ENST00000520233 SH3TC2Q8TF17 1288 aa20.1■□□□□ 0.81
SDC2-205ENST00000520233 LEO1Q8WVC0 666 aaPredicted RBP20.1■□□□□ 0.81
SDC2-205ENST00000520233 UIMC1Q96RL1 719 aa20.1■□□□□ 0.81
SDC2-205ENST00000520233 TEKT3Q9BXF9 490 aa20.1■□□□□ 0.81
SDC2-205ENST00000520233 TTC12Q9H892 705 aaPredicted RBP20.1■□□□□ 0.81
SDC2-205ENST00000520233 PCDHA12Q9UN75 941 aa20.1■□□□□ 0.81
SDC2-205ENST00000520233 GGPS1O95749 300 aa20.09■□□□□ 0.81
SDC2-205ENST00000520233 GH1P01241 217 aa20.09■□□□□ 0.81
SDC2-205ENST00000520233 MARCKSP29966 332 aaPredicted RBP20.09■□□□□ 0.81
SDC2-205ENST00000520233 CCND3P30281 292 aaPredicted RBP20.09■□□□□ 0.81
SDC2-205ENST00000520233 FXR2P51116 673 aaKnown RBP eCLIP20.09■□□□□ 0.81
SDC2-205ENST00000520233 TMEM266Q2M3C6 531 aa20.09■□□□□ 0.81
SDC2-205ENST00000520233 CELF3Q5SZQ8 465 aaKnown RBP20.09■□□□□ 0.81
SDC2-205ENST00000520233 TMEM63BQ5T3F8 832 aa20.09■□□□□ 0.81
SDC2-205ENST00000520233 FERMT2Q96AC1 680 aa20.09■□□□□ 0.81
SDC2-205ENST00000520233 SRPRBQ9Y5M8 271 aaKnown RBP20.09■□□□□ 0.81
SDC2-205ENST00000520233 ADCY6O43306 1168 aa20.08■□□□□ 0.81
SDC2-205ENST00000520233 CNGA1P29973 690 aa20.08■□□□□ 0.81
SDC2-205ENST00000520233 PPP2R5CQ13362 524 aa20.08■□□□□ 0.81
SDC2-205ENST00000520233 IL17AQ16552 155 aa20.08■□□□□ 0.81
SDC2-205ENST00000520233 B3GNT9Q6UX72 402 aa20.08■□□□□ 0.81
SDC2-205ENST00000520233 CYFIP1Q7L576 1253 aa20.08■□□□□ 0.81
SDC2-205ENST00000520233 DHX37Q8IY37 1157 aaKnown RBP20.08■□□□□ 0.81
SDC2-205ENST00000520233 COPS5Q92905 334 aa20.08■□□□□ 0.81
SDC2-205ENST00000520233 BCAS3Q9H6U6 928 aa20.08■□□□□ 0.81
SDC2-205ENST00000520233 MLXIPQ9HAP2 919 aa20.08■□□□□ 0.81
SDC2-205ENST00000520233 JPH1Q9HDC5 661 aaPredicted RBP20.08■□□□□ 0.81
SDC2-205ENST00000520233 HMX1Q9NP08 348 aaPredicted RBP20.08■□□□□ 0.81
SDC2-205ENST00000520233 SLC9A2Q9UBY0 812 aa20.08■□□□□ 0.81
SDC2-205ENST00000520233 TCEAL9Q9UHQ7 104 aa20.08■□□□□ 0.81
SDC2-205ENST00000520233 FBXO2Q9UK22 296 aaPredicted RBP20.08■□□□□ 0.81
SDC2-205ENST00000520233 VAV3Q9UKW4 847 aa20.08■□□□□ 0.81
SDC2-205ENST00000520233 GNEQ9Y223 722 aaKnown RBP20.08■□□□□ 0.81
SDC2-205ENST00000520233 Q9Y3F1 56 aa20.08■□□□□ 0.81
SDC2-205ENST00000520233 VWA3AA6NCI4 1184 aa20.07■□□□□ 0.8
SDC2-205ENST00000520233 FARP2O94887 1054 aaPredicted RBP20.07■□□□□ 0.8
SDC2-205ENST00000520233 TECP42680 631 aa20.07■□□□□ 0.8
SDC2-205ENST00000520233 KRT76Q01546 638 aa20.07■□□□□ 0.8
SDC2-205ENST00000520233 SPIRE1Q08AE8 756 aa20.07■□□□□ 0.8
SDC2-205ENST00000520233 LAMC2Q13753 1193 aa20.07■□□□□ 0.8
SDC2-205ENST00000520233 PDIA5Q14554 519 aa20.07■□□□□ 0.8
SDC2-205ENST00000520233 METTL7BQ6UX53 244 aa20.07■□□□□ 0.8
SDC2-205ENST00000520233 KRI1Q8N9T8 703 aaKnown RBP20.07■□□□□ 0.8
SDC2-205ENST00000520233 EMID1Q96A84 441 aaPredicted RBP20.07■□□□□ 0.8
SDC2-205ENST00000520233 GBP4Q96PP9 640 aa20.07■□□□□ 0.8
SDC2-205ENST00000520233 RAB34Q9BZG1 259 aa20.07■□□□□ 0.8
SDC2-205ENST00000520233 GDPD2Q9HCC8 539 aa20.07■□□□□ 0.8
SDC2-205ENST00000520233 DDX39AO00148 427 aaKnown RBP20.06■□□□□ 0.8
SDC2-205ENST00000520233 CUTAO60888 179 aa20.06■□□□□ 0.8
SDC2-205ENST00000520233 DUSP11O75319 330 aaKnown RBP20.06■□□□□ 0.8
SDC2-205ENST00000520233 ME1P48163 572 aa20.06■□□□□ 0.8
SDC2-205ENST00000520233 ARHGAP1Q07960 439 aa20.06■□□□□ 0.8
SDC2-205ENST00000520233 CSPP1Q1MSJ5 1256 aa20.06■□□□□ 0.8
SDC2-205ENST00000520233 GJC2Q5T442 439 aaPredicted RBP20.06■□□□□ 0.8
SDC2-205ENST00000520233 ZNF746Q6NUN9 644 aaPredicted RBP20.06■□□□□ 0.8
SDC2-205ENST00000520233 IGSF22Q8N9C0 903 aa20.06■□□□□ 0.8
SDC2-205ENST00000520233 UNC45AQ9H3U1 944 aa20.06■□□□□ 0.8
SDC2-205ENST00000520233 ELP1O95163 1332 aa20.05■□□□□ 0.8
SDC2-205ENST00000520233 SORBS3O60504 671 aa20.05■□□□□ 0.8
SDC2-205ENST00000520233 MSCO60682 206 aa20.05■□□□□ 0.8
SDC2-205ENST00000520233 LONP1P36776 959 aaKnown RBP20.05■□□□□ 0.8
SDC2-205ENST00000520233 OR6J1Q8NGC5 347 aa20.05■□□□□ 0.8
SDC2-205ENST00000520233 SPATA33Q96N06 139 aa20.05■□□□□ 0.8
SDC2-205ENST00000520233 DDX20Q9UHI6 824 aaKnown RBP20.05■□□□□ 0.8
SDC2-205ENST00000520233 PCDHA7Q9UN72 937 aa20.05■□□□□ 0.8
SDC2-205ENST00000520233 DYNC1LI2O43237 492 aaPredicted RBP20.04■□□□□ 0.8
SDC2-205ENST00000520233 CCNE2O96020 404 aa20.04■□□□□ 0.8
SDC2-205ENST00000520233 RARBP10826 455 aa20.04■□□□□ 0.8
SDC2-205ENST00000520233 SFNP31947 248 aa20.04■□□□□ 0.8
SDC2-205ENST00000520233 JAK3P52333 1124 aa20.04■□□□□ 0.8
SDC2-205ENST00000520233 GRIN1Q05586 938 aa20.04■□□□□ 0.8
SDC2-205ENST00000520233 NCAPH2Q6IBW4 605 aa20.04■□□□□ 0.8
SDC2-205ENST00000520233 TLK2Q86UE8 772 aa20.04■□□□□ 0.8
SDC2-205ENST00000520233 SMAP1Q8IYB5 467 aaPredicted RBP20.04■□□□□ 0.8
SDC2-205ENST00000520233 ZNF579Q8NAF0 562 aaKnown RBP20.04■□□□□ 0.8
SDC2-205ENST00000520233 TMEM87AQ8NBN3 555 aa20.04■□□□□ 0.8
SDC2-205ENST00000520233 RDM1Q8NG50 284 aa20.04■□□□□ 0.8
SDC2-205ENST00000520233 LENG1Q96BZ8 264 aaPredicted RBP20.04■□□□□ 0.8
SDC2-205ENST00000520233 ARMC5Q96C12 935 aa20.04■□□□□ 0.8
SDC2-205ENST00000520233 AK8Q96MA6 479 aa20.04■□□□□ 0.8
SDC2-205ENST00000520233 CLIC6Q96NY7 704 aa20.04■□□□□ 0.8
SDC2-205ENST00000520233 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.04■□□□□ 0.85e-8■□□□□ 10
SDC2-205ENST00000520233 AP5M1Q9H0R1 490 aa20.04■□□□□ 0.8
SDC2-205ENST00000520233 CSRNP2Q9H175 543 aa20.04■□□□□ 0.8
SDC2-205ENST00000520233 LRWD1Q9UFC0 647 aa20.04■□□□□ 0.8
SDC2-205ENST00000520233 POTEMA6NI47 508 aa20.03■□□□□ 0.8
SDC2-205ENST00000520233 WDR64B1ANS9 1081 aa20.03■□□□□ 0.8
SDC2-205ENST00000520233 EML1O00423 815 aa20.03■□□□□ 0.8
SDC2-205ENST00000520233 CHMP2AO43633 222 aa20.03■□□□□ 0.8
SDC2-205ENST00000520233 ATG7O95352 703 aa20.03■□□□□ 0.8
SDC2-205ENST00000520233 PTGS1P23219 599 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms