RNA–Protein interactions for RNA: ENST00000518959.1

ATP6V1C1-204, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 2

Gene ATP6V1C1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-204ENST00000518959 ARHGEF39Q8N4T4 335 aa4.93□□□□□ -1.62
ATP6V1C1-204ENST00000518959 ARRDC4Q8NCT1 418 aa4.93□□□□□ -1.62
ATP6V1C1-204ENST00000518959 VOPP1Q96AW1 172 aa4.93□□□□□ -1.62
ATP6V1C1-204ENST00000518959 DLL4Q9NR61 685 aa4.93□□□□□ -1.62
ATP6V1C1-204ENST00000518959 COA3Q9Y2R0 106 aaPredicted RBP4.93□□□□□ -1.62
ATP6V1C1-204ENST00000518959 SLC4A7Q9Y6M7 1214 aa4.93□□□□□ -1.62
ATP6V1C1-204ENST00000518959 AQRO60306 1485 aaKnown RBP eCLIP4.93□□□□□ -1.62
ATP6V1C1-204ENST00000518959 GRIN2BQ13224 1484 aa4.93□□□□□ -1.62
ATP6V1C1-204ENST00000518959 GAPVD1Q14C86 1478 aa4.93□□□□□ -1.62
ATP6V1C1-204ENST00000518959 CLASP1Q7Z460 1538 aa4.92□□□□□ -1.62
ATP6V1C1-204ENST00000518959 HGSO14964 777 aaPredicted RBP4.92□□□□□ -1.62
ATP6V1C1-204ENST00000518959 C1SP09871 688 aa4.92□□□□□ -1.62
ATP6V1C1-204ENST00000518959 SCRN1Q12765 414 aa4.92□□□□□ -1.62
ATP6V1C1-204ENST00000518959 Q6ZUG5 572 aa4.92□□□□□ -1.62
ATP6V1C1-204ENST00000518959 SND1Q7KZF4 910 aaKnown RBP eCLIP4.92□□□□□ -1.62
ATP6V1C1-204ENST00000518959 GPR155Q7Z3F1 870 aa4.92□□□□□ -1.62
ATP6V1C1-204ENST00000518959 MRGPRGQ86SM5 289 aa4.92□□□□□ -1.62
ATP6V1C1-204ENST00000518959 LDLRAD3Q86YD5 345 aa4.92□□□□□ -1.62
ATP6V1C1-204ENST00000518959 SCUBE1Q8IWY4 988 aa4.92□□□□□ -1.62
ATP6V1C1-204ENST00000518959 RCC1LQ96I51 464 aaKnown RBP4.92□□□□□ -1.62
ATP6V1C1-204ENST00000518959 ZNF652Q9Y2D9 606 aa4.92□□□□□ -1.62
ATP6V1C1-204ENST00000518959 PCDHB4Q9Y5E5 795 aa4.92□□□□□ -1.62
ATP6V1C1-204ENST00000518959 PCSK5Q92824 1860 aa4.92□□□□□ -1.62
ATP6V1C1-204ENST00000518959 PLSCR1O15162 318 aa4.91□□□□□ -1.62
ATP6V1C1-204ENST00000518959 SLC7A5Q01650 507 aa4.91□□□□□ -1.62
ATP6V1C1-204ENST00000518959 TAGLNQ01995 201 aaKnown RBP4.91□□□□□ -1.62
ATP6V1C1-204ENST00000518959 TUBA3CQ13748 450 aa4.91□□□□□ -1.62
ATP6V1C1-204ENST00000518959 INF2Q27J81 1249 aa4.91□□□□□ -1.62
ATP6V1C1-204ENST00000518959 TUBA3EQ6PEY2 450 aa4.91□□□□□ -1.62
ATP6V1C1-204ENST00000518959 FUKQ8N0W3 1084 aa4.91□□□□□ -1.62
ATP6V1C1-204ENST00000518959 FAM89AQ96GI7 184 aa4.91□□□□□ -1.62
ATP6V1C1-204ENST00000518959 TMEM169Q96HH4 297 aa4.91□□□□□ -1.62
ATP6V1C1-204ENST00000518959 MMRN2Q9H8L6 949 aa4.91□□□□□ -1.62
ATP6V1C1-204ENST00000518959 PCDHB10Q9UN67 800 aa4.91□□□□□ -1.62
ATP6V1C1-204ENST00000518959 AKT3Q9Y243 479 aa4.91□□□□□ -1.62
ATP6V1C1-204ENST00000518959 TIMM13Q9Y5L4 95 aaPredicted RBP4.91□□□□□ -1.62
ATP6V1C1-204ENST00000518959 SLC12A7Q9Y666 1083 aa4.91□□□□□ -1.62
ATP6V1C1-204ENST00000518959 POLA1P09884 1462 aaPredicted RBP4.9□□□□□ -1.62
ATP6V1C1-204ENST00000518959 MYO1BO43795 1136 aa4.9□□□□□ -1.63
ATP6V1C1-204ENST00000518959 FBXO21O94952 628 aa4.9□□□□□ -1.63
ATP6V1C1-204ENST00000518959 KCNH1O95259 989 aa4.9□□□□□ -1.63
ATP6V1C1-204ENST00000518959 LRG1P02750 347 aa4.9□□□□□ -1.63
ATP6V1C1-204ENST00000518959 MAKP20794 623 aa4.9□□□□□ -1.63
ATP6V1C1-204ENST00000518959 PHF19Q5T6S3 580 aa4.9□□□□□ -1.63
ATP6V1C1-204ENST00000518959 STEAP3Q658P3 488 aa4.9□□□□□ -1.63
ATP6V1C1-204ENST00000518959 DNAJC14Q6Y2X3 702 aaPredicted RBP4.9□□□□□ -1.63
ATP6V1C1-204ENST00000518959 COPS5Q92905 334 aa4.9□□□□□ -1.63
ATP6V1C1-204ENST00000518959 NEIL1Q96FI4 390 aaPredicted RBP4.9□□□□□ -1.63
ATP6V1C1-204ENST00000518959 AGAP2Q99490 1192 aa4.9□□□□□ -1.63
ATP6V1C1-204ENST00000518959 PHAXQ9H814 394 aaKnown RBP4.9□□□□□ -1.63
ATP6V1C1-204ENST00000518959 PPT2Q9UMR5 302 aa4.9□□□□□ -1.63
ATP6V1C1-204ENST00000518959 DMRT1Q9Y5R6 373 aa4.9□□□□□ -1.63
ATP6V1C1-204ENST00000518959 TARBP1Q13395 1621 aaKnown RBP4.9□□□□□ -1.63
ATP6V1C1-204ENST00000518959 TCRBV5S2A0A599 114 aa4.89□□□□□ -1.63
ATP6V1C1-204ENST00000518959 RAMP2O60895 175 aa4.89□□□□□ -1.63
ATP6V1C1-204ENST00000518959 KLHL18O94889 574 aa4.89□□□□□ -1.63
ATP6V1C1-204ENST00000518959 BCL6P41182 706 aa4.89□□□□□ -1.63
ATP6V1C1-204ENST00000518959 RAC3P60763 192 aa4.89□□□□□ -1.63
ATP6V1C1-204ENST00000518959 IQCEQ6IPM2 695 aa4.89□□□□□ -1.63
ATP6V1C1-204ENST00000518959 RBBP8NLQ8NC74 664 aaPredicted RBP4.89□□□□□ -1.63
ATP6V1C1-204ENST00000518959 ZNF483Q8TF39 744 aaPredicted RBP4.89□□□□□ -1.63
ATP6V1C1-204ENST00000518959 LARP4BQ92615 738 aaKnown RBP4.89□□□□□ -1.63
ATP6V1C1-204ENST00000518959 CRBNQ96SW2 442 aa4.89□□□□□ -1.63
ATP6V1C1-204ENST00000518959 REXO2Q9Y3B8 237 aaKnown RBP4.89□□□□□ -1.63
ATP6V1C1-204ENST00000518959 X6R8D5 127 aa4.89□□□□□ -1.63
ATP6V1C1-204ENST00000518959 TDRD9Q8NDG6 1382 aaKnown RBP4.89□□□□□ -1.63
ATP6V1C1-204ENST00000518959 SNAPC4Q5SXM2 1469 aa4.88□□□□□ -1.63
ATP6V1C1-204ENST00000518959 U2SURPO15042 1029 aaKnown RBP4.88□□□□□ -1.63
ATP6V1C1-204ENST00000518959 RAD17O75943 681 aa4.88□□□□□ -1.63
ATP6V1C1-204ENST00000518959 COL6A1P12109 1028 aa4.88□□□□□ -1.63
ATP6V1C1-204ENST00000518959 CSF2RBP32927 897 aa4.88□□□□□ -1.63
ATP6V1C1-204ENST00000518959 IL12RB1P42701 662 aa4.88□□□□□ -1.63
ATP6V1C1-204ENST00000518959 GTF2A2P52657 109 aa4.88□□□□□ -1.63
ATP6V1C1-204ENST00000518959 SMAD2Q15796 467 aaKnown RBP4.88□□□□□ -1.63
ATP6V1C1-204ENST00000518959 VASNQ6EMK4 673 aa4.88□□□□□ -1.63
ATP6V1C1-204ENST00000518959 POMZP3Q6PJE2 187 aa4.88□□□□□ -1.63
ATP6V1C1-204ENST00000518959 POLNQ7Z5Q5 900 aa4.88□□□□□ -1.63
ATP6V1C1-204ENST00000518959 CRACR2BQ8N4Y2 399 aaPredicted RBP4.88□□□□□ -1.63
ATP6V1C1-204ENST00000518959 IL17DQ8TAD2 202 aa4.88□□□□□ -1.63
ATP6V1C1-204ENST00000518959 CACTINQ8WUQ7 758 aaKnown RBP4.88□□□□□ -1.63
ATP6V1C1-204ENST00000518959 CHAMP1Q96JM3 812 aa4.88□□□□□ -1.63
ATP6V1C1-204ENST00000518959 RBPJLQ9UBG7 517 aa4.88□□□□□ -1.63
ATP6V1C1-204ENST00000518959 WASF3Q9UPY6 502 aa4.88□□□□□ -1.63
ATP6V1C1-204ENST00000518959 WIZO95785 1651 aa4.88□□□□□ -1.63
ATP6V1C1-204ENST00000518959 FBXO41Q8TF61 875 aa4.87□□□□□ -1.63
ATP6V1C1-204ENST00000518959 AJUBAQ96IF1 538 aa4.87□□□□□ -1.63
ATP6V1C1-204ENST00000518959 CCDC88BA6NC98 1476 aa4.87□□□□□ -1.63
ATP6V1C1-204ENST00000518959 ABCC10Q5T3U5 1492 aa4.87□□□□□ -1.63
ATP6V1C1-204ENST00000518959 NOP56O00567 594 aaKnown RBP4.86□□□□□ -1.63
ATP6V1C1-204ENST00000518959 BMP5P22003 454 aa4.86□□□□□ -1.63
ATP6V1C1-204ENST00000518959 ACRV1P26436 265 aa4.86□□□□□ -1.63
ATP6V1C1-204ENST00000518959 USP10Q14694 798 aaKnown RBP4.86□□□□□ -1.63
ATP6V1C1-204ENST00000518959 Q6ZSN1 163 aa4.86□□□□□ -1.63
ATP6V1C1-204ENST00000518959 NLRP10Q86W26 655 aa4.86□□□□□ -1.63
ATP6V1C1-204ENST00000518959 DIO2Q92813 273 aa4.86□□□□□ -1.63
ATP6V1C1-204ENST00000518959 CLIP3Q96DZ5 547 aa4.86□□□□□ -1.63
ATP6V1C1-204ENST00000518959 OR14A2Q96R54 314 aa4.86□□□□□ -1.63
ATP6V1C1-204ENST00000518959 MYOTQ9UBF9 498 aa4.86□□□□□ -1.63
ATP6V1C1-204ENST00000518959 CDC14BO60729 498 aa4.85□□□□□ -1.63
ATP6V1C1-204ENST00000518959 TADA3O75528 432 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms