RNA–Protein interactions for RNA: ENST00000518847.1

TRAPPC2-206, Transcript of trafficking protein particle complex 2, humanhuman

TSL 4

Gene TRAPPC2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-206ENST00000518847 NCLP19338 710 aaKnown RBP13.36□□□□□ -0.27
TRAPPC2-206ENST00000518847 MUTP22033 750 aa13.36□□□□□ -0.27
TRAPPC2-206ENST00000518847 LONP1P36776 959 aaKnown RBP13.36□□□□□ -0.27
TRAPPC2-206ENST00000518847 FXR2P51116 673 aaKnown RBP eCLIP13.36□□□□□ -0.27
TRAPPC2-206ENST00000518847 ATP2C1P98194 919 aaPredicted RBP13.36□□□□□ -0.27
TRAPPC2-206ENST00000518847 SLC39A14Q15043 492 aa13.36□□□□□ -0.27
TRAPPC2-206ENST00000518847 ZNF174Q15697 407 aa13.36□□□□□ -0.27
TRAPPC2-206ENST00000518847 DGKDQ16760 1214 aa13.36□□□□□ -0.27
TRAPPC2-206ENST00000518847 CELF3Q5SZQ8 465 aaKnown RBP13.36□□□□□ -0.27
TRAPPC2-206ENST00000518847 MIS18BP1Q6P0N0 1132 aa13.36□□□□□ -0.27
TRAPPC2-206ENST00000518847 CCDC62Q6P9F0 684 aa13.36□□□□□ -0.27
TRAPPC2-206ENST00000518847 IL31RAQ8NI17 732 aa13.36□□□□□ -0.27
TRAPPC2-206ENST00000518847 KATNAL1Q9BW62 490 aa13.36□□□□□ -0.27
TRAPPC2-206ENST00000518847 KATNBL1Q9H079 304 aa13.36□□□□□ -0.27
TRAPPC2-206ENST00000518847 AZI2Q9H6S1 392 aa13.36□□□□□ -0.27
TRAPPC2-206ENST00000518847 SPTLC2O15270 562 aa13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 DTNBO60941 627 aa13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 TDP2O95551 362 aa13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 GGPS1O95749 300 aa13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 PSAPP07602 524 aa13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 KCNA2P16389 499 aa13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 PTMSP20962 102 aa13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 UBA1P22314 1058 aaKnown RBP13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 TOB1P50616 345 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 NKX3-2P78367 333 aa13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 PPP2R5CQ13362 524 aa13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 EARS2Q5JPH6 523 aaKnown RBP13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 FAM160B1Q5W0V3 765 aa13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 TLK2Q86UE8 772 aa13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 EXOC8Q8IYI6 725 aa13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 KRI1Q8N9T8 703 aaKnown RBP13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 ANKLE1Q8NAG6 615 aa13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 OR6J1Q8NGC5 347 aa13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 ETNPPLQ8TBG4 499 aa13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 SEPT1Q8WYJ6 367 aa13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 LENG9Q96B70 501 aa13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 ZNF333Q96JL9 665 aa13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 MTMR9Q96QG7 549 aa13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 TSEN34Q9BSV6 310 aaKnown RBP13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 RNF208Q9H0X6 261 aa13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 TTC12Q9H892 705 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 XPNPEP3Q9NQH7 507 aa13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 ZNF215Q9UL58 517 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 SAMM50Q9Y512 469 aa13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 PCDHB6Q9Y5E3 794 aa13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 PCDHA10Q9Y5I2 948 aa13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 LRRC37A2A6NM11 1700 aa13.35□□□□□ -0.27
TRAPPC2-206ENST00000518847 MCM3APO60318 1980 aa13.34□□□□□ -0.27
TRAPPC2-206ENST00000518847 MOXD2PA6NHM9 499 aa13.34□□□□□ -0.27
TRAPPC2-206ENST00000518847 RGS20O76081 388 aa13.34□□□□□ -0.27
TRAPPC2-206ENST00000518847 CST5P28325 142 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC2-206ENST00000518847 ADCYAP1R1P41586 468 aa13.34□□□□□ -0.27
TRAPPC2-206ENST00000518847 GJA9P57773 515 aa13.34□□□□□ -0.27
TRAPPC2-206ENST00000518847 KRT79Q5XKE5 535 aa13.34□□□□□ -0.27
TRAPPC2-206ENST00000518847 POTEDQ86YR6 584 aa13.34□□□□□ -0.27
TRAPPC2-206ENST00000518847 ZNF579Q8NAF0 562 aaKnown RBP13.34□□□□□ -0.27
TRAPPC2-206ENST00000518847 ATP6V0A1Q93050 837 aa13.34□□□□□ -0.27
TRAPPC2-206ENST00000518847 SPATA32Q96LK8 384 aa13.34□□□□□ -0.27
TRAPPC2-206ENST00000518847 SPATA33Q96N06 139 aa13.34□□□□□ -0.27
TRAPPC2-206ENST00000518847 NT5C3AQ9H0P0 336 aa13.34□□□□□ -0.27
TRAPPC2-206ENST00000518847 PAK6Q9NQU5 681 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC2-206ENST00000518847 GNEQ9Y223 722 aaKnown RBP13.34□□□□□ -0.27
TRAPPC2-206ENST00000518847 SRPRBQ9Y5M8 271 aaKnown RBP13.34□□□□□ -0.27
TRAPPC2-206ENST00000518847 ELP1O95163 1332 aa13.34□□□□□ -0.27
TRAPPC2-206ENST00000518847 KDM3AQ9Y4C1 1321 aa13.34□□□□□ -0.27
TRAPPC2-206ENST00000518847 A6NJR5 290 aa13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 KBTBD13C9JR72 458 aa13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 SLC37A4O43826 429 aa13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 CUTAO60888 179 aa13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 PSMD10O75832 226 aa13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 FARP2O94887 1054 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 GJB1P08034 283 aa13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 ARP10275 920 aa13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 CCL5P13501 91 aa13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 SMPD1P17405 629 aa13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 TXKP42681 527 aa13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 ME1P48163 572 aa13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 PKP1Q13835 747 aa13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 FSCN1Q16658 493 aaKnown RBP13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 LY6KQ17RY6 165 aa13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 FOXD4L5Q5VV16 416 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 CYFIP1Q7L576 1253 aa13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 LINC00301Q8NCQ3 95 aa13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 CYP2W1Q8TAV3 490 aa13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 SH3TC2Q8TF17 1288 aa13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 FOXD4L4Q8WXT5 416 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 FAM167AQ96KS9 214 aa13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 UPF3AQ9H1J1 476 aaKnown RBP13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 SMARCAD1Q9H4L7 1026 aa13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 LRWD1Q9UFC0 647 aa13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 CCDC39Q9UFE4 941 aa13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 RCOR1Q9UKL0 485 aa13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 PPME1Q9Y570 386 aa13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 MYH15Q9Y2K3 1946 aa13.33□□□□□ -0.28
TRAPPC2-206ENST00000518847 ZSWIM8A7E2V4 1837 aa13.32□□□□□ -0.28
TRAPPC2-206ENST00000518847 FAM205CA6NFA0 338 aa13.32□□□□□ -0.28
TRAPPC2-206ENST00000518847 DYNC1LI2O43237 492 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC2-206ENST00000518847 RPLP2P05387 115 aaKnown RBP13.32□□□□□ -0.28
TRAPPC2-206ENST00000518847 P4HBP07237 508 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms