RNA–Protein interactions for RNA: ENST00000517857.1

TOP1MT-203, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2

Gene TOP1MT, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-203ENST00000517857 CLTBP09497 229 aa16.57■□□□□ 0.24
TOP1MT-203ENST00000517857 ARP10275 920 aa16.57■□□□□ 0.24
TOP1MT-203ENST00000517857 KCNA2P16389 499 aa16.57■□□□□ 0.24
TOP1MT-203ENST00000517857 KRT2P35908 639 aa16.57■□□□□ 0.24
TOP1MT-203ENST00000517857 HMGN5P82970 282 aaKnown RBP16.57■□□□□ 0.24
TOP1MT-203ENST00000517857 SETQ01105 290 aaPredicted RBP16.57■□□□□ 0.24
TOP1MT-203ENST00000517857 NONOQ15233 471 aaKnown RBP eCLIP16.57■□□□□ 0.24
TOP1MT-203ENST00000517857 NPY5RQ15761 445 aa16.57■□□□□ 0.24
TOP1MT-203ENST00000517857 TBCKQ8TEA7 893 aa16.57■□□□□ 0.24
TOP1MT-203ENST00000517857 PPP1R13LQ8WUF5 828 aa16.57■□□□□ 0.24
TOP1MT-203ENST00000517857 SDF4Q9BRK5 362 aa16.57■□□□□ 0.24
TOP1MT-203ENST00000517857 KATNAL1Q9BW62 490 aa16.57■□□□□ 0.24
TOP1MT-203ENST00000517857 PDLIM7Q9NR12 457 aa16.57■□□□□ 0.24
TOP1MT-203ENST00000517857 CEP290O15078 2479 aa16.57■□□□□ 0.24
TOP1MT-203ENST00000517857 FAM86B1E9PN63 330 aa16.56■□□□□ 0.24
TOP1MT-203ENST00000517857 FAM86B2P0C5J1 330 aa16.56■□□□□ 0.24
TOP1MT-203ENST00000517857 NBPF20Q3BBV1 942 aa16.56■□□□□ 0.24
TOP1MT-203ENST00000517857 PRR16Q569H4 304 aa16.56■□□□□ 0.24
TOP1MT-203ENST00000517857 NIPA1Q7RTP0 329 aa16.56■□□□□ 0.24
TOP1MT-203ENST00000517857 ANKRD33Q7Z3H0 272 aa16.56■□□□□ 0.24
TOP1MT-203ENST00000517857 CRYGNQ8WXF5 182 aa16.56■□□□□ 0.24
TOP1MT-203ENST00000517857 TMX3Q96JJ7 454 aa16.56■□□□□ 0.24
TOP1MT-203ENST00000517857 SEZ6LQ9BYH1 1024 aa16.56■□□□□ 0.24
TOP1MT-203ENST00000517857 AGO4Q9HCK5 861 aaKnown RBP16.56■□□□□ 0.24
TOP1MT-203ENST00000517857 JPH1Q9HDC5 661 aaPredicted RBP16.56■□□□□ 0.24
TOP1MT-203ENST00000517857 TMEM39AQ9NV64 488 aa16.56■□□□□ 0.24
TOP1MT-203ENST00000517857 PCDH10Q9P2E7 1040 aa16.56■□□□□ 0.24
TOP1MT-203ENST00000517857 GRIN2DO15399 1336 aa16.55■□□□□ 0.24
TOP1MT-203ENST00000517857 M0R2N6 131 aa16.55■□□□□ 0.24
TOP1MT-203ENST00000517857 DDX39AO00148 427 aaKnown RBP16.55■□□□□ 0.24
TOP1MT-203ENST00000517857 MEIS1O00470 390 aa16.55■□□□□ 0.24
TOP1MT-203ENST00000517857 PPFIA4O75335 1185 aa16.55■□□□□ 0.24
TOP1MT-203ENST00000517857 LGALS2P05162 132 aa16.55■□□□□ 0.24
TOP1MT-203ENST00000517857 PSEN2P49810 448 aa16.55■□□□□ 0.24
TOP1MT-203ENST00000517857 CDK7P50613 346 aa16.55■□□□□ 0.24
TOP1MT-203ENST00000517857 GUCY1B3Q02153 619 aa16.55■□□□□ 0.24
TOP1MT-203ENST00000517857 MFSD10Q14728 455 aa16.55■□□□□ 0.24
TOP1MT-203ENST00000517857 INF2Q27J81 1249 aa16.55■□□□□ 0.24
TOP1MT-203ENST00000517857 UTP14CQ5TAP6 766 aaKnown RBP16.55■□□□□ 0.24
TOP1MT-203ENST00000517857 KRT40Q6A162 431 aa16.55■□□□□ 0.24
TOP1MT-203ENST00000517857 FAM126BQ8IXS8 530 aa16.55■□□□□ 0.24
TOP1MT-203ENST00000517857 OXER1Q8TDS5 423 aa16.55■□□□□ 0.24
TOP1MT-203ENST00000517857 C8orf76Q96K31 380 aa16.55■□□□□ 0.24
TOP1MT-203ENST00000517857 TOX2Q96NM4 488 aa16.55■□□□□ 0.24
TOP1MT-203ENST00000517857 UIMC1Q96RL1 719 aa16.55■□□□□ 0.24
TOP1MT-203ENST00000517857 GPR20Q99678 358 aa16.55■□□□□ 0.24
TOP1MT-203ENST00000517857 LBHD1Q9BQE6 289 aaPredicted RBP16.55■□□□□ 0.24
TOP1MT-203ENST00000517857 TCEAL9Q9UHQ7 104 aa16.55■□□□□ 0.24
TOP1MT-203ENST00000517857 NFASCO94856 1347 aa16.54■□□□□ 0.24
TOP1MT-203ENST00000517857 IGLV3-22A0A075B6J6 115 aa16.54■□□□□ 0.24
TOP1MT-203ENST00000517857 F2P00734 622 aa16.54■□□□□ 0.24
TOP1MT-203ENST00000517857 MMP1P03956 469 aa16.54■□□□□ 0.24
TOP1MT-203ENST00000517857 HOXD8P13378 290 aaPredicted RBP16.54■□□□□ 0.24
TOP1MT-203ENST00000517857 TCF7P36402 384 aaPredicted RBP16.54■□□□□ 0.24
TOP1MT-203ENST00000517857 USP11P51784 963 aa16.54■□□□□ 0.24
TOP1MT-203ENST00000517857 FAAP100Q0VG06 881 aa16.54■□□□□ 0.24
TOP1MT-203ENST00000517857 SAFBQ15424 915 aaKnown RBP eCLIP16.54■□□□□ 0.24
TOP1MT-203ENST00000517857 KIAA0753Q2KHM9 967 aa16.54■□□□□ 0.24
TOP1MT-203ENST00000517857 CHRDL2Q6WN34 429 aa16.54■□□□□ 0.24
TOP1MT-203ENST00000517857 PIK3AP1Q6ZUJ8 805 aa16.54■□□□□ 0.24
TOP1MT-203ENST00000517857 SH3RF1Q7Z6J0 888 aa16.54■□□□□ 0.24
TOP1MT-203ENST00000517857 SLC43A3Q8NBI5 491 aa16.54■□□□□ 0.24
TOP1MT-203ENST00000517857 KAT2BQ92831 832 aa16.54■□□□□ 0.24
TOP1MT-203ENST00000517857 ZNF577Q9BSK1 485 aa16.54■□□□□ 0.24
TOP1MT-203ENST00000517857 SLC9A2Q9UBY0 812 aa16.54■□□□□ 0.24
TOP1MT-203ENST00000517857 ZNF215Q9UL58 517 aaPredicted RBP16.54■□□□□ 0.24
TOP1MT-203ENST00000517857 NOD1Q9Y239 953 aa16.54■□□□□ 0.24
TOP1MT-203ENST00000517857 TELO2Q9Y4R8 837 aa16.54■□□□□ 0.24
TOP1MT-203ENST00000517857 B4GALT4O60513 344 aa16.53■□□□□ 0.24
TOP1MT-203ENST00000517857 TDP2O95551 362 aa16.53■□□□□ 0.24
TOP1MT-203ENST00000517857 RAG1P15918 1043 aa16.53■□□□□ 0.24
TOP1MT-203ENST00000517857 CIITAP33076 1130 aa16.53■□□□□ 0.24
TOP1MT-203ENST00000517857 MDM2Q00987 491 aaPredicted RBP16.53■□□□□ 0.24
TOP1MT-203ENST00000517857 NR5A1Q13285 461 aa16.53■□□□□ 0.24
TOP1MT-203ENST00000517857 ITGB3BPQ13352 177 aaPredicted RBP16.53■□□□□ 0.24
TOP1MT-203ENST00000517857 LETM2Q2VYF4 491 aa16.53■□□□□ 0.24
TOP1MT-203ENST00000517857 NFRKBQ6P4R8 1299 aa16.53■□□□□ 0.24
TOP1MT-203ENST00000517857 TRIM50Q86XT4 487 aa16.53■□□□□ 0.24
TOP1MT-203ENST00000517857 DIS3L2Q8IYB7 885 aaKnown RBP16.53■□□□□ 0.24
TOP1MT-203ENST00000517857 C7orf31Q8N865 590 aa16.53■□□□□ 0.24
TOP1MT-203ENST00000517857 TRPV6Q9H1D0 765 aa16.53■□□□□ 0.24
TOP1MT-203ENST00000517857 KIF3AQ9Y496 699 aa16.53■□□□□ 0.24
TOP1MT-203ENST00000517857 TRIM43BA6NCK2 446 aa16.52■□□□□ 0.24
TOP1MT-203ENST00000517857 H3BRB1 525 aa16.52■□□□□ 0.24
TOP1MT-203ENST00000517857 IPO5O00410 1097 aaKnown RBP16.52■□□□□ 0.24
TOP1MT-203ENST00000517857 MAGEA10P43363 369 aaPredicted RBP16.52■□□□□ 0.24
TOP1MT-203ENST00000517857 PTPN11Q06124 597 aaPredicted RBP16.52■□□□□ 0.24
TOP1MT-203ENST00000517857 GNL2Q13823 731 aaKnown RBP16.52■□□□□ 0.24
TOP1MT-203ENST00000517857 NEK8Q86SG6 692 aa16.52■□□□□ 0.24
TOP1MT-203ENST00000517857 SEPT1Q8WYJ6 367 aa16.52■□□□□ 0.24
TOP1MT-203ENST00000517857 TRIM43Q96BQ3 446 aaPredicted RBP16.52■□□□□ 0.24
TOP1MT-203ENST00000517857 PPP1R12CQ9BZL4 782 aa16.52■□□□□ 0.24
TOP1MT-203ENST00000517857 TUT1Q9H6E5 874 aaKnown RBP16.52■□□□□ 0.24
TOP1MT-203ENST00000517857 TRMT13Q9NUP7 481 aaKnown RBP16.52■□□□□ 0.24
TOP1MT-203ENST00000517857 BTBD18B2RXH4 712 aa16.51■□□□□ 0.23
TOP1MT-203ENST00000517857 KIAA0355O15063 1070 aa16.51■□□□□ 0.23
TOP1MT-203ENST00000517857 CD4P01730 458 aa16.51■□□□□ 0.23
TOP1MT-203ENST00000517857 SUPT20HL2P0C7V6 817 aa16.51■□□□□ 0.23
TOP1MT-203ENST00000517857 ACTR2P61160 394 aa16.51■□□□□ 0.23
TOP1MT-203ENST00000517857 GLG1Q92896 1179 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms