RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 CEP72Q9P209 647 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 ARMCX3Q9UH62 379 aaPredicted RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 LCMT1Q9UIC8 334 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 PNMA2Q9UL42 364 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 ASAP1Q9ULH1 1129 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 HPCAL4Q9UM19 191 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 SNX12Q9UMY4 172 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 PCDHA6Q9UN73 950 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 MINPP1Q9UNW1 487 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 ATP6V0A2Q9Y487 856 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 CTDP1Q9Y5B0 961 aaPredicted RBP2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 PCDHA8Q9Y5H6 950 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 TAF6LQ9Y6J9 622 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 FAM169AQ9Y6X4 670 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 LOXHD1Q8IVV2 1947 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 MRC1P22897 1456 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 C1orf167Q5SNV9 1468 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 ANKRD36CQ5JPF3 1778 aa2.26□□□□□ -2.05
RNU1-40P-201ENST00000516816 ATRNO75882 1429 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 TJP1Q07157 1748 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 ZNF804BA4D1E1 1349 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 NEDD4P46934 1319 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 ATXN2Q99700 1313 aaKnown RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 PITPNM2Q9BZ72 1349 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 MED1Q15648 1581 aaPredicted RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 A0A087WWV3 80 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 A0A0A6YYK5 440 aaPredicted RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 ESYT2A0FGR8 921 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 TLDC2A0PJX2 215 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 PALM3A6NDB9 673 aaPredicted RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 CFAP73A6NFT4 308 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 FAM187AA6NFU0 413 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 BTNL10A8MVZ5 291 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 PGRMC1O00264 195 aaKnown RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 IPO5O00410 1097 aaKnown RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 MPHOSPH10O00566 681 aaKnown RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 PDXKO00764 312 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 KCNK3O14649 394 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 SNPHO15079 494 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 TBX3O15119 743 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 FOXN1O15353 648 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 EIF3HO15372 352 aaKnown RBP eCLIP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 RGS16O15492 202 aaPredicted RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 PRKAB2O43741 272 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 ONECUT3O60422 494 aaPredicted RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 EVI5O60447 810 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 BUB1BO60566 1050 aaPredicted RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 PRDM1O75626 825 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 SUN1O94901 812 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 HEXIM1O94992 359 aaKnown RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 MOCS3O95396 460 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 LCA5LO95447 670 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 ADAMTS2O95450 1211 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 TTLL1O95922 423 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 SYF2O95926 243 aaKnown RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 FAM107AO95990 144 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 LMNAP02545 664 aaKnown RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 AFPP02771 609 aaKnown RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 GYPCP04921 128 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 ATP1A1P05023 1023 aaKnown RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 C7P10643 843 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 ATP2A2P16615 1042 aaKnown RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 NR1D1P20393 614 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 BMP6P22004 513 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 RFX1P22670 979 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 GUCY2CP25092 1073 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 GUCY1A2P33402 732 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 MDH1P40925 334 aaKnown RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 GYG1P46976 350 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 CCT5P48643 541 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 CDK8P49336 464 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 SMTNP53814 917 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 DRG2P55039 364 aaKnown RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 MFAP3P55082 362 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 SH3BGRP55822 239 aaPredicted RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 BPIFB4P59827 614 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 MCCD1P59942 119 aaPredicted RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 PPP4CP60510 307 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 POLR2FP61218 127 aaKnown RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 USP46P62068 366 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 SNRPFP62306 86 aaKnown RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 VSNL1P62760 191 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 LACTBP83111 547 aaPredicted RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 SKOR1P84550 965 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 ATP11AP98196 1134 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 CYP27A1Q02318 531 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 MECOMQ03112 1051 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 EHHADHQ08426 723 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 ADCY2Q08462 1091 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 GOLGA8FQ08AF8 430 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 GOLGA8DPQ0D2H9 430 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 KCNH2Q12809 1159 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 IKQ13123 557 aaPredicted RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 NR1H3Q13133 447 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 PRPF4BQ13523 1007 aaKnown RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 ALCAMQ13740 583 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 RAPGEF1Q13905 1077 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 RASGRF1Q13972 1273 aa2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 DHX34Q14147 1143 aaKnown RBP2.25□□□□□ -2.05
RNU1-40P-201ENST00000516816 SCARF1Q14162 830 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms