RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 NAT16Q8N8M0 369 aa4.18□□□□□ -1.74
SCARNA15.2-201ENST00000516409 LINC00116Q8NCU8 138 aa4.18□□□□□ -1.74
SCARNA15.2-201ENST00000516409 PJA1Q8NG27 643 aa4.18□□□□□ -1.74
SCARNA15.2-201ENST00000516409 PANK1Q8TE04 598 aa4.18□□□□□ -1.74
SCARNA15.2-201ENST00000516409 LMBR1Q8WVP7 490 aa4.18□□□□□ -1.74
SCARNA15.2-201ENST00000516409 DPF3Q92784 378 aa4.18□□□□□ -1.74
SCARNA15.2-201ENST00000516409 TEKT5Q96M29 485 aa4.18□□□□□ -1.74
SCARNA15.2-201ENST00000516409 SLC12A5Q9H2X9 1139 aa4.18□□□□□ -1.74
SCARNA15.2-201ENST00000516409 TRIT1Q9H3H1 467 aaKnown RBP4.18□□□□□ -1.74
SCARNA15.2-201ENST00000516409 CCM2LQ9NUG4 571 aaPredicted RBP4.18□□□□□ -1.74
SCARNA15.2-201ENST00000516409 TAGLN3Q9UI15 199 aa4.18□□□□□ -1.74
SCARNA15.2-201ENST00000516409 RCAN3Q9UKA8 241 aa4.18□□□□□ -1.74
SCARNA15.2-201ENST00000516409 ZNF652Q9Y2D9 606 aa4.18□□□□□ -1.74
SCARNA15.2-201ENST00000516409 SPO11Q9Y5K1 396 aa4.18□□□□□ -1.74
SCARNA15.2-201ENST00000516409 FRMPD2Q68DX3 1309 aaPredicted RBP4.18□□□□□ -1.74
SCARNA15.2-201ENST00000516409 KLHL33A6NCF5 533 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 TRIM75PA6NK02 468 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 IGF2BP3O00425 579 aaKnown RBP eCLIP4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 IFRD1O00458 451 aaPredicted RBP4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 SCDO00767 359 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 KDM1AO60341 852 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 GNAT1P11488 350 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 PAX3P23760 479 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 PTX3P26022 381 aaPredicted RBP4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 LTKP29376 864 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 LSP1P33241 339 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 KIF11P52732 1056 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 KRT85P78386 507 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 SMAD3P84022 425 aaKnown RBP4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 NRG1Q02297 640 aaPredicted RBP4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 PICALMQ13492 652 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 GTF2H3Q13889 308 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 ADGRE1Q14246 886 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 GBX1Q14549 363 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 GPR19Q15760 415 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 SMAD2Q15796 467 aaKnown RBP4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 IFIT1BQ5T764 474 aaKnown RBP4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 ANGEL2Q5VTE6 544 aaKnown RBP4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 CPZQ66K79 652 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 ARHGAP36Q6ZRI8 547 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 ZNF765Q7L2R6 523 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 ZAR1Q86SH2 424 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 NOSTRINQ8IVI9 506 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 TEX2Q8IWB9 1127 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 SPICE1Q8N0Z3 855 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 FAM181AQ8N9Y4 354 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 JADE3Q92613 823 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 RUNDC1Q96C34 613 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 SCYL1Q96KG9 808 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 AIFM3Q96NN9 605 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 ZDHHC5Q9C0B5 715 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 PCIF1Q9H4Z3 704 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 ZSWIM5Q9P217 1185 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 INTUQ9ULD6 942 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 DAAM1Q9Y4D1 1078 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 PCDHA11Q9Y5I1 949 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 CNTNAP5Q8WYK1 1306 aa4.17□□□□□ -1.74
SCARNA15.2-201ENST00000516409 TMEM82A0PJX8 343 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 HMX2A2RU54 273 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 WTIPA6NIX2 430 aaPredicted RBP4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 MAN2B1O00754 1011 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 ERC2O15083 957 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 NKRFO15226 690 aaKnown RBP eCLIP4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 DHX15O43143 795 aaKnown RBP4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 AP1G1O43747 822 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 NPHS1O60500 1241 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 TBC1D8O95759 1140 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 HSPA6P17066 643 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 SERPINB3P29508 390 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 GTF2A2P52657 109 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 OXCT1P55809 520 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 PHC1P78364 1004 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 RBM10P98175 930 aaKnown RBP4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 ZNF267Q14586 743 aaPredicted RBP4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 NKPD1Q17RQ9 610 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 GAB4Q2WGN9 574 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 LONRF3Q496Y0 759 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 CYP27C1Q4G0S4 372 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 RRP12Q5JTH9 1297 aaKnown RBP4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 ESRP1Q6NXG1 681 aaKnown RBP4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 HHIPL2Q6UWX4 724 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 CYP2R1Q6VVX0 501 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 RNF111Q6ZNA4 994 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 ARHGAP27Q6ZUM4 889 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 CEP68Q76N32 757 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 C11orf96Q7Z7L8 435 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 FBXL6Q8N531 539 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 ZNF610Q8N9Z0 462 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 SH3RF2Q8TEC5 729 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 UBE2FQ969M7 185 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 E2F7Q96AV8 911 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 TMEM169Q96HH4 297 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 HSPA12BQ96MM6 686 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 NACC1Q96RE7 527 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 NUP88Q99567 741 aaPredicted RBP4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 FAM83CQ9BQN1 747 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 CD244Q9BZW8 370 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 ZMAT4Q9H898 229 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 SP110Q9HB58 689 aa4.16□□□□□ -1.74
SCARNA15.2-201ENST00000516409 PTPRHQ9HD43 1115 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms