RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 CNOT4O95628 575 aaKnown RBP2.82□□□□□ -1.96
RNU6-561P-201ENST00000516222 ACO1P21399 889 aaKnown RBP2.82□□□□□ -1.96
RNU6-561P-201ENST00000516222 FPR2P25090 351 aa2.82□□□□□ -1.96
RNU6-561P-201ENST00000516222 DNAJA1P31689 397 aaKnown RBP2.82□□□□□ -1.96
RNU6-561P-201ENST00000516222 BCL6P41182 706 aa2.82□□□□□ -1.96
RNU6-561P-201ENST00000516222 ZNF143P52747 638 aaPredicted RBP2.82□□□□□ -1.96
RNU6-561P-201ENST00000516222 LSAMPQ13449 338 aa2.82□□□□□ -1.96
RNU6-561P-201ENST00000516222 TUBA3CQ13748 450 aa2.82□□□□□ -1.96
RNU6-561P-201ENST00000516222 USP10Q14694 798 aaKnown RBP2.82□□□□□ -1.96
RNU6-561P-201ENST00000516222 AGBL4Q5VU57 503 aa2.82□□□□□ -1.96
RNU6-561P-201ENST00000516222 TUBA3EQ6PEY2 450 aa2.82□□□□□ -1.96
RNU6-561P-201ENST00000516222 TMC5Q6UXY8 1006 aa2.82□□□□□ -1.96
RNU6-561P-201ENST00000516222 POLNQ7Z5Q5 900 aa2.82□□□□□ -1.96
RNU6-561P-201ENST00000516222 ARRDC4Q8NCT1 418 aa2.82□□□□□ -1.96
RNU6-561P-201ENST00000516222 AJUBAQ96IF1 538 aa2.82□□□□□ -1.96
RNU6-561P-201ENST00000516222 PRRX2Q99811 253 aa2.82□□□□□ -1.96
RNU6-561P-201ENST00000516222 SMOC1Q9H4F8 434 aa2.82□□□□□ -1.96
RNU6-561P-201ENST00000516222 EPB41L1Q9H4G0 881 aa2.82□□□□□ -1.96
RNU6-561P-201ENST00000516222 DLL4Q9NR61 685 aa2.82□□□□□ -1.96
RNU6-561P-201ENST00000516222 HSPBP1Q9NZL4 362 aa2.82□□□□□ -1.96
RNU6-561P-201ENST00000516222 MYOTQ9UBF9 498 aa2.82□□□□□ -1.96
RNU6-561P-201ENST00000516222 PCDHB10Q9UN67 800 aa2.82□□□□□ -1.96
RNU6-561P-201ENST00000516222 EMC9Q9Y3B6 208 aa2.82□□□□□ -1.96
RNU6-561P-201ENST00000516222 TADA3O75528 432 aa2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 RAD17O75943 681 aa2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 CPP00450 1065 aa2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 LRG1P02750 347 aa2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 ENO2P09104 434 aaPredicted RBP2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 CR2P20023 1033 aa2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 HOXC12P31275 282 aa2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 ZNF76P36508 570 aa2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 RPS19P39019 145 aaKnown RBP2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 TAGLNQ01995 201 aaKnown RBP2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 INF2Q27J81 1249 aa2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 ZMAT1Q5H9K5 638 aa2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 MBLAC2Q68D91 279 aa2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 GTF2IRD2BQ6EKJ0 949 aa2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 CYP4F22Q6NT55 531 aa2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 KIAA1211LQ6NV74 962 aa2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 VHLLQ6RSH7 139 aa2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 DPP8Q6V1X1 898 aaPredicted RBP2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 GTF2IRD2Q86UP8 949 aa2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 NUDT10Q8NFP7 164 aa2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 CPLX3Q8WVH0 158 aa2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 NEIL1Q96FI4 390 aaPredicted RBP2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 NUDT11Q96G61 164 aa2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 NAF1Q96HR8 494 aaKnown RBP2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 CARD11Q9BXL7 1154 aa2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 NKX2-4Q9H2Z4 354 aa2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 ARHGAP20Q9P2F6 1191 aa2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 LRP2BPQ9P2M1 347 aa2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 REXO2Q9Y3B8 237 aaKnown RBP2.81□□□□□ -1.96
RNU6-561P-201ENST00000516222 A0A1W2PQH9 124 aa2.8□□□□□ -1.96
RNU6-561P-201ENST00000516222 TMEM191CA6NGB0 347 aa2.8□□□□□ -1.96
RNU6-561P-201ENST00000516222 H0Y858 1186 aa2.8□□□□□ -1.96
RNU6-561P-201ENST00000516222 CUTAO60888 179 aa2.8□□□□□ -1.96
RNU6-561P-201ENST00000516222 KLHL18O94889 574 aa2.8□□□□□ -1.96
RNU6-561P-201ENST00000516222 HIBADHP31937 336 aaKnown RBP2.8□□□□□ -1.96
RNU6-561P-201ENST00000516222 NCAPHQ15003 741 aa2.8□□□□□ -1.96
RNU6-561P-201ENST00000516222 CSRP2Q16527 193 aa2.8□□□□□ -1.96
RNU6-561P-201ENST00000516222 EMC4Q5J8M3 183 aa2.8□□□□□ -1.96
RNU6-561P-201ENST00000516222 FUKQ8N0W3 1084 aa2.8□□□□□ -1.96
RNU6-561P-201ENST00000516222 Q8N1Y9 231 aa2.8□□□□□ -1.96
RNU6-561P-201ENST00000516222 ZNF483Q8TF39 744 aaPredicted RBP2.8□□□□□ -1.96
RNU6-561P-201ENST00000516222 FRS2Q8WU20 508 aa2.8□□□□□ -1.96
RNU6-561P-201ENST00000516222 BCL2L13Q9BXK5 485 aa2.8□□□□□ -1.96
RNU6-561P-201ENST00000516222 C12orf65Q9H3J6 166 aaKnown RBP2.8□□□□□ -1.96
RNU6-561P-201ENST00000516222 MSL2Q9HCI7 577 aa2.8□□□□□ -1.96
RNU6-561P-201ENST00000516222 PARPBPQ9NWS1 579 aa2.8□□□□□ -1.96
RNU6-561P-201ENST00000516222 CLDND1Q9NY35 253 aa2.8□□□□□ -1.96
RNU6-561P-201ENST00000516222 PCDHA2Q9Y5H9 948 aa2.8□□□□□ -1.96
RNU6-561P-201ENST00000516222 CYP27B1O15528 508 aa2.79□□□□□ -1.96
RNU6-561P-201ENST00000516222 CDC14BO60729 498 aa2.79□□□□□ -1.96
RNU6-561P-201ENST00000516222 CKMP06732 381 aa2.79□□□□□ -1.96
RNU6-561P-201ENST00000516222 SNRPB2P08579 225 aaKnown RBP2.79□□□□□ -1.96
RNU6-561P-201ENST00000516222 ACRV1P26436 265 aa2.79□□□□□ -1.96
RNU6-561P-201ENST00000516222 CSF2RBP32927 897 aa2.79□□□□□ -1.96
RNU6-561P-201ENST00000516222 LTBRP36941 435 aa2.79□□□□□ -1.96
RNU6-561P-201ENST00000516222 ECI1P42126 302 aa2.79□□□□□ -1.96
RNU6-561P-201ENST00000516222 KCNJ6P48051 423 aa2.79□□□□□ -1.96
RNU6-561P-201ENST00000516222 GIPRP48546 466 aa2.79□□□□□ -1.96
RNU6-561P-201ENST00000516222 CCDC27Q2M243 656 aa2.79□□□□□ -1.96
RNU6-561P-201ENST00000516222 CCDC81Q6ZN84 652 aa2.79□□□□□ -1.96
RNU6-561P-201ENST00000516222 GPR155Q7Z3F1 870 aa2.79□□□□□ -1.96
RNU6-561P-201ENST00000516222 TRIM59Q8IWR1 403 aa2.79□□□□□ -1.96
RNU6-561P-201ENST00000516222 THEMISQ8N1K5 641 aaPredicted RBP2.79□□□□□ -1.96
RNU6-561P-201ENST00000516222 DTX3Q8N9I9 347 aa2.79□□□□□ -1.96
RNU6-561P-201ENST00000516222 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.79□□□□□ -1.96
RNU6-561P-201ENST00000516222 SCYL1Q96KG9 808 aa2.79□□□□□ -1.96
RNU6-561P-201ENST00000516222 OR14A2Q96R54 314 aa2.79□□□□□ -1.96
RNU6-561P-201ENST00000516222 KATNBL1Q9H079 304 aa2.79□□□□□ -1.96
RNU6-561P-201ENST00000516222 MMRN2Q9H8L6 949 aa2.79□□□□□ -1.96
RNU6-561P-201ENST00000516222 TNFRSF18Q9Y5U5 241 aa2.79□□□□□ -1.96
RNU6-561P-201ENST00000516222 U2SURPO15042 1029 aaKnown RBP2.78□□□□□ -1.96
RNU6-561P-201ENST00000516222 KNG1P01042 644 aa2.78□□□□□ -1.96
RNU6-561P-201ENST00000516222 GLRBP48167 497 aa2.78□□□□□ -1.96
RNU6-561P-201ENST00000516222 ZC3H6P61129 1189 aaKnown RBP2.78□□□□□ -1.96
RNU6-561P-201ENST00000516222 DGCR2P98153 550 aa2.78□□□□□ -1.96
RNU6-561P-201ENST00000516222 MRPL58Q14197 206 aaKnown RBP2.78□□□□□ -1.96
RNU6-561P-201ENST00000516222 SKIDA1Q1XH10 827 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms