RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 FOXN1O15353 648 aa9.53□□□□□ -0.88
SFXN1-211ENST00000515736 DHX16O60231 1041 aaKnown RBP9.53□□□□□ -0.88
SFXN1-211ENST00000515736 NTSR2O95665 410 aa9.53□□□□□ -0.88
SFXN1-211ENST00000515736 GYS2P54840 703 aa9.53□□□□□ -0.88
SFXN1-211ENST00000515736 KRT85P78386 507 aa9.53□□□□□ -0.88
SFXN1-211ENST00000515736 CCDC173Q0VFZ6 552 aa9.53□□□□□ -0.88
SFXN1-211ENST00000515736 ALX1Q15699 326 aa9.53□□□□□ -0.88
SFXN1-211ENST00000515736 MTERF2Q49AM1 385 aa9.53□□□□□ -0.88
SFXN1-211ENST00000515736 PERM1Q5SV97 790 aa9.53□□□□□ -0.88
SFXN1-211ENST00000515736 MAP1SQ66K74 1059 aaPredicted RBP9.53□□□□□ -0.88
SFXN1-211ENST00000515736 CAVIN1Q6NZI2 390 aaKnown RBP9.53□□□□□ -0.88
SFXN1-211ENST00000515736 LRSAM1Q6UWE0 723 aa9.53□□□□□ -0.88
SFXN1-211ENST00000515736 C16orf86Q6ZW13 317 aa9.53□□□□□ -0.88
SFXN1-211ENST00000515736 PNMA8AQ86V59 439 aaPredicted RBP9.53□□□□□ -0.88
SFXN1-211ENST00000515736 TNFRSF25Q93038 417 aa9.53□□□□□ -0.88
SFXN1-211ENST00000515736 MTA3Q9BTC8 594 aa9.53□□□□□ -0.88
SFXN1-211ENST00000515736 SCAND2PQ9GZW5 306 aaPredicted RBP9.53□□□□□ -0.88
SFXN1-211ENST00000515736 LACRTQ9GZZ8 138 aa9.53□□□□□ -0.88
SFXN1-211ENST00000515736 ZSCAN16Q9H4T2 348 aaPredicted RBP9.53□□□□□ -0.88
SFXN1-211ENST00000515736 CACNA2D2Q9NY47 1150 aa9.53□□□□□ -0.88
SFXN1-211ENST00000515736 SLC6A14Q9UN76 642 aa9.53□□□□□ -0.88
SFXN1-211ENST00000515736 TRIM33Q9UPN9 1127 aa9.53□□□□□ -0.88
SFXN1-211ENST00000515736 MTMR6Q9Y217 621 aa9.53□□□□□ -0.88
SFXN1-211ENST00000515736 LEMD3Q9Y2U8 911 aa9.53□□□□□ -0.88
SFXN1-211ENST00000515736 TRPM7Q96QT4 1865 aa9.53□□□□□ -0.88
SFXN1-211ENST00000515736 PDS5AQ29RF7 1337 aaKnown RBP9.53□□□□□ -0.88
SFXN1-211ENST00000515736 A0A1W2PQH9 124 aa9.52□□□□□ -0.89
SFXN1-211ENST00000515736 FZD9O00144 591 aa9.52□□□□□ -0.89
SFXN1-211ENST00000515736 LARGE1O95461 756 aa9.52□□□□□ -0.89
SFXN1-211ENST00000515736 GNAT2P19087 354 aa9.52□□□□□ -0.89
SFXN1-211ENST00000515736 ADD2P35612 726 aa9.52□□□□□ -0.89
SFXN1-211ENST00000515736 EXOSC10Q01780 885 aaKnown RBP9.52□□□□□ -0.89
SFXN1-211ENST00000515736 MAP3K12Q12852 859 aa9.52□□□□□ -0.89
SFXN1-211ENST00000515736 IKBKEQ14164 716 aa9.52□□□□□ -0.89
SFXN1-211ENST00000515736 SF3B3Q15393 1217 aaKnown RBP9.52□□□□□ -0.89
SFXN1-211ENST00000515736 SUSD4Q5VX71 490 aa9.52□□□□□ -0.89
SFXN1-211ENST00000515736 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.52□□□□□ -0.89
SFXN1-211ENST00000515736 Q6ZUG5 572 aa9.52□□□□□ -0.89
SFXN1-211ENST00000515736 GPC2Q8N158 579 aa9.52□□□□□ -0.89
SFXN1-211ENST00000515736 FAM43AQ8N2R8 423 aa9.52□□□□□ -0.89
SFXN1-211ENST00000515736 SMARCC2Q8TAQ2 1214 aa9.52□□□□□ -0.89
SFXN1-211ENST00000515736 GPT2Q8TD30 523 aa9.52□□□□□ -0.89
SFXN1-211ENST00000515736 THAP3Q8WTV1 239 aaPredicted RBP9.52□□□□□ -0.89
SFXN1-211ENST00000515736 PSMD1Q99460 953 aa9.52□□□□□ -0.89
SFXN1-211ENST00000515736 SMG9Q9H0W8 520 aaKnown RBP9.52□□□□□ -0.89
SFXN1-211ENST00000515736 TMX4Q9H1E5 349 aaPredicted RBP9.52□□□□□ -0.89
SFXN1-211ENST00000515736 NAGPAQ9UK23 515 aa9.52□□□□□ -0.89
SFXN1-211ENST00000515736 ABT1Q9ULW3 272 aaKnown RBP9.52□□□□□ -0.89
SFXN1-211ENST00000515736 MEIS3P2A8K0S8 358 aa9.51□□□□□ -0.89
SFXN1-211ENST00000515736 E7EWF7 191 aa9.51□□□□□ -0.89
SFXN1-211ENST00000515736 C2CD2LO14523 706 aa9.51□□□□□ -0.89
SFXN1-211ENST00000515736 DDAH1O94760 285 aa9.51□□□□□ -0.89
SFXN1-211ENST00000515736 CPA1P15085 419 aa9.51□□□□□ -0.89
SFXN1-211ENST00000515736 SELPP16109 830 aa9.51□□□□□ -0.89
SFXN1-211ENST00000515736 ADORA1P30542 326 aa9.51□□□□□ -0.89
SFXN1-211ENST00000515736 MCM5P33992 734 aa9.51□□□□□ -0.89
SFXN1-211ENST00000515736 MCAMP43121 646 aa9.51□□□□□ -0.89
SFXN1-211ENST00000515736 CTCFP49711 727 aaPredicted RBP9.51□□□□□ -0.89
SFXN1-211ENST00000515736 NT5C2P49902 561 aa9.51□□□□□ -0.89
SFXN1-211ENST00000515736 AP3B2Q13367 1082 aa9.51□□□□□ -0.89
SFXN1-211ENST00000515736 UBE4AQ14139 1066 aa9.51□□□□□ -0.89
SFXN1-211ENST00000515736 HS1BP3Q53T59 392 aa9.51□□□□□ -0.89
SFXN1-211ENST00000515736 SLC10A5Q5PT55 438 aa9.51□□□□□ -0.89
SFXN1-211ENST00000515736 CCDC183Q5T5S1 534 aa9.51□□□□□ -0.89
SFXN1-211ENST00000515736 NAA16Q6N069 864 aaPredicted RBP9.51□□□□□ -0.89
SFXN1-211ENST00000515736 NCOA7Q8NI08 942 aa9.51□□□□□ -0.89
SFXN1-211ENST00000515736 OSBP2Q969R2 916 aa9.51□□□□□ -0.89
SFXN1-211ENST00000515736 RBM17Q96I25 401 aaKnown RBP9.51□□□□□ -0.89
SFXN1-211ENST00000515736 TRERF1Q96PN7 1200 aa9.51□□□□□ -0.89
SFXN1-211ENST00000515736 SEC62Q99442 399 aaKnown RBP9.51□□□□□ -0.89
SFXN1-211ENST00000515736 FEZ1Q99689 392 aa9.51□□□□□ -0.89
SFXN1-211ENST00000515736 LPIN3Q9BQK8 851 aa9.51□□□□□ -0.89
SFXN1-211ENST00000515736 LTBP1Q14766 1721 aa9.51□□□□□ -0.89
SFXN1-211ENST00000515736 LAMB1P07942 1786 aa9.5□□□□□ -0.89
SFXN1-211ENST00000515736 B2RBV5 119 aa9.5□□□□□ -0.89
SFXN1-211ENST00000515736 M0R2C6 588 aa9.5□□□□□ -0.89
SFXN1-211ENST00000515736 GPAA1O43292 621 aa9.5□□□□□ -0.89
SFXN1-211ENST00000515736 RGS20O76081 388 aa9.5□□□□□ -0.89
SFXN1-211ENST00000515736 GSTP1P09211 210 aaKnown RBP9.5□□□□□ -0.89
SFXN1-211ENST00000515736 PCBP4P57723 403 aaKnown RBP9.5□□□□□ -0.89
SFXN1-211ENST00000515736 ST3GAL1Q11201 340 aa9.5□□□□□ -0.89
SFXN1-211ENST00000515736 TRDNQ13061 729 aa9.5□□□□□ -0.89
SFXN1-211ENST00000515736 GRM1Q13255 1194 aa9.5□□□□□ -0.89
SFXN1-211ENST00000515736 DEFB115Q30KQ5 88 aa9.5□□□□□ -0.89
SFXN1-211ENST00000515736 CRY2Q49AN0 593 aa9.5□□□□□ -0.89
SFXN1-211ENST00000515736 ELMSAN1Q6PJG2 1045 aa9.5□□□□□ -0.89
SFXN1-211ENST00000515736 C6orf15Q6UXA7 325 aaPredicted RBP9.5□□□□□ -0.89
SFXN1-211ENST00000515736 CCDC129Q6ZRS4 1044 aa9.5□□□□□ -0.89
SFXN1-211ENST00000515736 RALYLQ86SE5 291 aaKnown RBP9.5□□□□□ -0.89
SFXN1-211ENST00000515736 TTC6Q86TZ1 520 aa9.5□□□□□ -0.89
SFXN1-211ENST00000515736 FAM178BQ8IXR5 827 aa9.5□□□□□ -0.89
SFXN1-211ENST00000515736 NIM1KQ8IY84 436 aa9.5□□□□□ -0.89
SFXN1-211ENST00000515736 RPUSD2Q8IZ73 545 aaKnown RBP9.5□□□□□ -0.89
SFXN1-211ENST00000515736 ST13P5Q8NFI4 369 aaPredicted RBP9.5□□□□□ -0.89
SFXN1-211ENST00000515736 PPP1R9BQ96SB3 815 aa9.5□□□□□ -0.89
SFXN1-211ENST00000515736 TM9SF2Q99805 663 aa9.5□□□□□ -0.89
SFXN1-211ENST00000515736 CNNM2Q9H8M5 875 aa9.5□□□□□ -0.89
SFXN1-211ENST00000515736 AVENQ9NQS1 362 aaPredicted RBP9.5□□□□□ -0.89
SFXN1-211ENST00000515736 AAASQ9NRG9 546 aa9.5□□□□□ -0.89
SFXN1-211ENST00000515736 GNL3LQ9NVN8 582 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms