RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 DCDC2CA8MYV0 355 aa29.51■■■□□ 2.31
DDR1-279ENST00000515529 FAM86B1E9PN63 330 aa29.51■■■□□ 2.31
DDR1-279ENST00000515529 ATP9AO75110 1047 aa29.51■■■□□ 2.31
DDR1-279ENST00000515529 PPFIA4O75335 1185 aa29.51■■■□□ 2.31
DDR1-279ENST00000515529 FAM86B2P0C5J1 330 aa29.51■■■□□ 2.31
DDR1-279ENST00000515529 ARP10275 920 aa29.51■■■□□ 2.31
DDR1-279ENST00000515529 KCNA2P16389 499 aa29.51■■■□□ 2.31
DDR1-279ENST00000515529 PSMC6P62333 389 aa29.51■■■□□ 2.31
DDR1-279ENST00000515529 PRR16Q569H4 304 aa29.51■■■□□ 2.31
DDR1-279ENST00000515529 OXER1Q8TDS5 423 aa29.51■■■□□ 2.31
DDR1-279ENST00000515529 MYH7BA7E2Y1 1941 aa29.5■■■□□ 2.31
DDR1-279ENST00000515529 CIITAP33076 1130 aa29.5■■■□□ 2.31
DDR1-279ENST00000515529 INF2Q27J81 1249 aa29.5■■■□□ 2.31
DDR1-279ENST00000515529 PIK3AP1Q6ZUJ8 805 aa29.5■■■□□ 2.31
DDR1-279ENST00000515529 KATNAL1Q9BW62 490 aa29.5■■■□□ 2.31
DDR1-279ENST00000515529 BCAS3Q9H6U6 928 aa29.5■■■□□ 2.31
DDR1-279ENST00000515529 AGO4Q9HCK5 861 aaKnown RBP29.5■■■□□ 2.31
DDR1-279ENST00000515529 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.5■■■□□ 2.31
DDR1-279ENST00000515529 TLR3O15455 904 aaKnown RBP29.49■■■□□ 2.31
DDR1-279ENST00000515529 GUCY1B3Q02153 619 aa29.49■■■□□ 2.31
DDR1-279ENST00000515529 TLE2Q04725 743 aa29.49■■■□□ 2.31
DDR1-279ENST00000515529 DIS3L2Q8IYB7 885 aaKnown RBP29.49■■■□□ 2.31
DDR1-279ENST00000515529 JPH1Q9HDC5 661 aaPredicted RBP29.49■■■□□ 2.31
DDR1-279ENST00000515529 TCEAL9Q9UHQ7 104 aa29.49■■■□□ 2.31
DDR1-279ENST00000515529 ALPK3Q96L96 1907 aa29.48■■■□□ 2.31
DDR1-279ENST00000515529 ZNF286BP0CG31 522 aa29.48■■■□□ 2.31
DDR1-279ENST00000515529 GNL2Q13823 731 aaKnown RBP29.48■■■□□ 2.31
DDR1-279ENST00000515529 ZNF577Q9BSK1 485 aa29.48■■■□□ 2.31
DDR1-279ENST00000515529 PRDM5Q9NQX1 630 aaPredicted RBP29.48■■■□□ 2.31
DDR1-279ENST00000515529 ZMYND8Q9ULU4 1186 aaPredicted RBP29.48■■■□□ 2.31
DDR1-279ENST00000515529 SMC3Q9UQE7 1217 aa29.48■■■□□ 2.31
DDR1-279ENST00000515529 NFASCO94856 1347 aa29.47■■■□□ 2.31
DDR1-279ENST00000515529 IGLV3-22A0A075B6J6 115 aa29.47■■■□□ 2.31
DDR1-279ENST00000515529 H0YGN5 161 aa29.47■■■□□ 2.31
DDR1-279ENST00000515529 HOXD8P13378 290 aaPredicted RBP29.47■■■□□ 2.31
DDR1-279ENST00000515529 NR5A1Q13285 461 aa29.47■■■□□ 2.31
DDR1-279ENST00000515529 FAM47CQ5HY64 1035 aa29.47■■■□□ 2.31
DDR1-279ENST00000515529 ANKRD33Q7Z3H0 272 aa29.47■■■□□ 2.31
DDR1-279ENST00000515529 NEK8Q86SG6 692 aa29.47■■■□□ 2.31
DDR1-279ENST00000515529 TOX2Q96NM4 488 aa29.47■■■□□ 2.31
DDR1-279ENST00000515529 GPR20Q99678 358 aa29.47■■■□□ 2.31
DDR1-279ENST00000515529 SLC9A2Q9UBY0 812 aa29.47■■■□□ 2.31
DDR1-279ENST00000515529 BTBD18B2RXH4 712 aa29.46■■■□□ 2.31
DDR1-279ENST00000515529 IPO5O00410 1097 aaKnown RBP29.46■■■□□ 2.31
DDR1-279ENST00000515529 CDK7P50613 346 aa29.46■■■□□ 2.31
DDR1-279ENST00000515529 LETM2Q2VYF4 491 aa29.46■■■□□ 2.31
DDR1-279ENST00000515529 NBPF20Q3BBV1 942 aa29.46■■■□□ 2.31
DDR1-279ENST00000515529 NAP1L4Q99733 375 aaKnown RBP29.46■■■□□ 2.31
DDR1-279ENST00000515529 TNRC18O15417 2968 aaPredicted RBP29.45■■■□□ 2.31
DDR1-279ENST00000515529 CLTBP09497 229 aa29.45■■■□□ 2.31
DDR1-279ENST00000515529 UTP14CQ5TAP6 766 aaKnown RBP29.45■■■□□ 2.31
DDR1-279ENST00000515529 PRPF38BQ5VTL8 546 aaKnown RBP29.45■■■□□ 2.31
DDR1-279ENST00000515529 SLC43A3Q8NBI5 491 aa29.45■■■□□ 2.31
DDR1-279ENST00000515529 FBXO18Q8NFZ0 1043 aa29.45■■■□□ 2.31
DDR1-279ENST00000515529 SEPT1Q8WYJ6 367 aa29.45■■■□□ 2.31
DDR1-279ENST00000515529 TBC1D22BQ9NU19 505 aa29.45■■■□□ 2.31
DDR1-279ENST00000515529 DDX39AO00148 427 aaKnown RBP29.44■■■□□ 2.3
DDR1-279ENST00000515529 F2P00734 622 aa29.44■■■□□ 2.3
DDR1-279ENST00000515529 LGALS2P05162 132 aa29.44■■■□□ 2.3
DDR1-279ENST00000515529 SYN1P17600 705 aa29.44■■■□□ 2.3
DDR1-279ENST00000515529 GJB2P29033 226 aa29.44■■■□□ 2.3
DDR1-279ENST00000515529 PSEN2P49810 448 aa29.44■■■□□ 2.3
DDR1-279ENST00000515529 MFSD10Q14728 455 aa29.44■■■□□ 2.3
DDR1-279ENST00000515529 NFRKBQ6P4R8 1299 aa29.44■■■□□ 2.3
DDR1-279ENST00000515529 MOXD1Q6UVY6 613 aa29.44■■■□□ 2.3
DDR1-279ENST00000515529 ZNF215Q9UL58 517 aaPredicted RBP29.44■■■□□ 2.3
DDR1-279ENST00000515529 GRIN2DO15399 1336 aa29.44■■■□□ 2.3
DDR1-279ENST00000515529 TDP2O95551 362 aa29.43■■■□□ 2.3
DDR1-279ENST00000515529 GCFC2P16383 781 aaKnown RBP29.43■■■□□ 2.3
DDR1-279ENST00000515529 TCF7P36402 384 aaPredicted RBP29.43■■■□□ 2.3
DDR1-279ENST00000515529 ITGB3BPQ13352 177 aaPredicted RBP29.43■■■□□ 2.3
DDR1-279ENST00000515529 KAT2BQ92831 832 aa29.43■■■□□ 2.3
DDR1-279ENST00000515529 UIMC1Q96RL1 719 aa29.43■■■□□ 2.3
DDR1-279ENST00000515529 TMEM39AQ9NV64 488 aa29.43■■■□□ 2.3
DDR1-279ENST00000515529 DDX25Q9UHL0 483 aaKnown RBP29.43■■■□□ 2.3
DDR1-279ENST00000515529 DOCK5Q9H7D0 1870 aa29.42■■■□□ 2.3
DDR1-279ENST00000515529 CYP3A7-CYP3A51PA0A087WV96 503 aa29.42■■■□□ 2.3
DDR1-279ENST00000515529 H3BRB1 525 aa29.42■■■□□ 2.3
DDR1-279ENST00000515529 CYP3A7P24462 503 aa29.42■■■□□ 2.3
DDR1-279ENST00000515529 PTPN11Q06124 597 aaPredicted RBP29.42■■■□□ 2.3
DDR1-279ENST00000515529 KIAA0753Q2KHM9 967 aa29.42■■■□□ 2.3
DDR1-279ENST00000515529 Q4G0T1 1027 aa29.42■■■□□ 2.3
DDR1-279ENST00000515529 FAM126BQ8IXS8 530 aa29.42■■■□□ 2.3
DDR1-279ENST00000515529 C7orf31Q8N865 590 aa29.42■■■□□ 2.3
DDR1-279ENST00000515529 TNFRSF25Q93038 417 aa29.42■■■□□ 2.3
DDR1-279ENST00000515529 TUT1Q9H6E5 874 aaKnown RBP29.42■■■□□ 2.3
DDR1-279ENST00000515529 PDLIM7Q9NR12 457 aa29.42■■■□□ 2.3
DDR1-279ENST00000515529 K7ELQ4 463 aaPredicted RBP29.41■■■□□ 2.3
DDR1-279ENST00000515529 CCNT1O60563 726 aaKnown RBP29.41■■■□□ 2.3
DDR1-279ENST00000515529 HSCBQ8IWL3 235 aa29.41■■■□□ 2.3
DDR1-279ENST00000515529 GLG1Q92896 1179 aa29.41■■■□□ 2.3
DDR1-279ENST00000515529 LENG9Q96B70 501 aa29.41■■■□□ 2.3
DDR1-279ENST00000515529 C16orf70Q9BSU1 422 aa29.41■■■□□ 2.3
DDR1-279ENST00000515529 AZI2Q9H6S1 392 aa29.41■■■□□ 2.3
DDR1-279ENST00000515529 NOD1Q9Y239 953 aa29.41■■■□□ 2.3
DDR1-279ENST00000515529 H3BQV1 296 aa29.4■■■□□ 2.3
DDR1-279ENST00000515529 MSH4O15457 936 aa29.4■■■□□ 2.3
DDR1-279ENST00000515529 SUPT20HL2P0C7V6 817 aa29.4■■■□□ 2.3
DDR1-279ENST00000515529 ACTR2P61160 394 aa29.4■■■□□ 2.3
DDR1-279ENST00000515529 FAAP100Q0VG06 881 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms