RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 RBL2Q08999 1139 aa15.67■□□□□ 0.1
TCOF1-215ENST00000515516 UTP14CQ5TAP6 766 aaKnown RBP15.67■□□□□ 0.1
TCOF1-215ENST00000515516 PPP2R2DQ66LE6 453 aa15.67■□□□□ 0.1
TCOF1-215ENST00000515516 TEX2Q8IWB9 1127 aa15.67■□□□□ 0.1
TCOF1-215ENST00000515516 DHX38Q92620 1227 aaKnown RBP15.67■□□□□ 0.1
TCOF1-215ENST00000515516 ATP6V0A1Q93050 837 aa15.67■□□□□ 0.1
TCOF1-215ENST00000515516 JAKMIP1Q96N16 626 aaKnown RBP15.67■□□□□ 0.1
TCOF1-215ENST00000515516 CTAGE1Q96RT6 745 aa15.67■□□□□ 0.1
TCOF1-215ENST00000515516 GPR20Q99678 358 aa15.67■□□□□ 0.1
TCOF1-215ENST00000515516 GLT8D2Q9H1C3 349 aa15.67■□□□□ 0.1
TCOF1-215ENST00000515516 PRDM12Q9H4Q4 367 aa15.67■□□□□ 0.1
TCOF1-215ENST00000515516 BCAS3Q9H6U6 928 aa15.67■□□□□ 0.1
TCOF1-215ENST00000515516 YBX2Q9Y2T7 364 aaKnown RBP15.67■□□□□ 0.1
TCOF1-215ENST00000515516 SCN10AQ9Y5Y9 1956 aa15.66■□□□□ 0.1
TCOF1-215ENST00000515516 hCG_1984214I3L0E3 225 aa15.66■□□□□ 0.1
TCOF1-215ENST00000515516 SMIM10L2AP0DMW4 78 aa15.66■□□□□ 0.1
TCOF1-215ENST00000515516 SMIM10L2BP0DMW5 78 aa15.66■□□□□ 0.1
TCOF1-215ENST00000515516 THPOP40225 353 aa15.66■□□□□ 0.1
TCOF1-215ENST00000515516 METAP2P50579 478 aaKnown RBP eCLIP15.66■□□□□ 0.13e-8■■□□□ 13.7
TCOF1-215ENST00000515516 ADCY7P51828 1080 aa15.66■□□□□ 0.1
TCOF1-215ENST00000515516 RCAN1P53805 252 aa15.66■□□□□ 0.1
TCOF1-215ENST00000515516 SEMA3FQ13275 785 aa15.66■□□□□ 0.1
TCOF1-215ENST00000515516 MTMR1Q13613 665 aa15.66■□□□□ 0.1
TCOF1-215ENST00000515516 WWC2Q6AWC2 1192 aa15.66■□□□□ 0.1
TCOF1-215ENST00000515516 PPP1R18Q6NYC8 613 aa15.66■□□□□ 0.1
TCOF1-215ENST00000515516 CNKSR3Q6P9H4 555 aa15.66■□□□□ 0.1
TCOF1-215ENST00000515516 BLOC1S2Q6QNY1 142 aa15.66■□□□□ 0.1
TCOF1-215ENST00000515516 ZNF713Q8N859 430 aaPredicted RBP15.66■□□□□ 0.1
TCOF1-215ENST00000515516 CNTNAP5Q8WYK1 1306 aa15.66■□□□□ 0.1
TCOF1-215ENST00000515516 MAFGO15525 162 aa15.65■□□□□ 0.1
TCOF1-215ENST00000515516 EFCAB14O75071 495 aa15.65■□□□□ 0.1
TCOF1-215ENST00000515516 FOSP01100 380 aaPredicted RBP15.65■□□□□ 0.1
TCOF1-215ENST00000515516 IGFBP4P22692 258 aa15.65■□□□□ 0.1
TCOF1-215ENST00000515516 PSMA5P28066 241 aa15.65■□□□□ 0.1
TCOF1-215ENST00000515516 HSPA4P34932 840 aa15.65■□□□□ 0.1
TCOF1-215ENST00000515516 ZNF618Q5T7W0 954 aa15.65■□□□□ 0.1
TCOF1-215ENST00000515516 Q6ZUG5 572 aa15.65■□□□□ 0.1
TCOF1-215ENST00000515516 ZBED2Q9BTP6 218 aa15.65■□□□□ 0.1
TCOF1-215ENST00000515516 RIC8AQ9NPQ8 531 aa15.65■□□□□ 0.1
TCOF1-215ENST00000515516 EMSYQ7Z589 1322 aa15.65■□□□□ 0.1
TCOF1-215ENST00000515516 MYH6P13533 1939 aa15.64■□□□□ 0.09
TCOF1-215ENST00000515516 SMCO2A6NFE2 343 aa15.64■□□□□ 0.09
TCOF1-215ENST00000515516 RSPH10B2B2RC85 870 aa15.64■□□□□ 0.09
TCOF1-215ENST00000515516 CXCL10P02778 98 aa15.64■□□□□ 0.09
TCOF1-215ENST00000515516 RSPH10BP0C881 870 aa15.64■□□□□ 0.09
TCOF1-215ENST00000515516 MYOGP15173 224 aa15.64■□□□□ 0.09
TCOF1-215ENST00000515516 ITGB5P18084 799 aa15.64■□□□□ 0.09
TCOF1-215ENST00000515516 IKBKEQ14164 716 aa15.64■□□□□ 0.09
TCOF1-215ENST00000515516 SERINC5Q86VE9 423 aa15.64■□□□□ 0.09
TCOF1-215ENST00000515516 HERC6Q8IVU3 1022 aa15.64■□□□□ 0.09
TCOF1-215ENST00000515516 SEPT1Q8WYJ6 367 aa15.64■□□□□ 0.09
TCOF1-215ENST00000515516 KCNB2Q92953 911 aa15.64■□□□□ 0.09
TCOF1-215ENST00000515516 RNPEPQ9H4A4 650 aa15.64■□□□□ 0.09
TCOF1-215ENST00000515516 JADE2Q9NQC1 790 aa15.64■□□□□ 0.09
TCOF1-215ENST00000515516 PKD2L1Q9P0L9 805 aa15.64■□□□□ 0.09
TCOF1-215ENST00000515516 SNX14Q9Y5W7 946 aa15.64■□□□□ 0.09
TCOF1-215ENST00000515516 UBIAD1Q9Y5Z9 338 aa15.64■□□□□ 0.09
TCOF1-215ENST00000515516 ABHD14A-ACY1A0A1B0GW23 586 aa15.63■□□□□ 0.09
TCOF1-215ENST00000515516 STXBP3O00186 592 aa15.63■□□□□ 0.09
TCOF1-215ENST00000515516 TLL1O43897 1013 aa15.63■□□□□ 0.09
TCOF1-215ENST00000515516 NBNO60934 754 aa15.63■□□□□ 0.09
TCOF1-215ENST00000515516 CPA1P15085 419 aa15.63■□□□□ 0.09
TCOF1-215ENST00000515516 KCNA2P16389 499 aa15.63■□□□□ 0.09
TCOF1-215ENST00000515516 TCF7P36402 384 aaPredicted RBP15.63■□□□□ 0.09
TCOF1-215ENST00000515516 ZNF76P36508 570 aa15.63■□□□□ 0.09
TCOF1-215ENST00000515516 AKAP17AQ02040 695 aaKnown RBP15.63■□□□□ 0.09
TCOF1-215ENST00000515516 APOBRQ0VD83 1088 aa15.63■□□□□ 0.09
TCOF1-215ENST00000515516 TRIM71Q2Q1W2 868 aaKnown RBP15.63■□□□□ 0.09
TCOF1-215ENST00000515516 PPM1EQ8WY54 764 aa15.63■□□□□ 0.09
TCOF1-215ENST00000515516 GLG1Q92896 1179 aa15.63■□□□□ 0.09
TCOF1-215ENST00000515516 BRF1Q92994 677 aa15.63■□□□□ 0.09
TCOF1-215ENST00000515516 SETD4Q9NVD3 440 aa15.63■□□□□ 0.09
TCOF1-215ENST00000515516 BARHL2Q9NY43 387 aa15.63■□□□□ 0.09
TCOF1-215ENST00000515516 BAZ2BQ9UIF8 2168 aaKnown RBP15.62■□□□□ 0.09
TCOF1-215ENST00000515516 TREHO43280 583 aa15.62■□□□□ 0.09
TCOF1-215ENST00000515516 ATP9AO75110 1047 aa15.62■□□□□ 0.09
TCOF1-215ENST00000515516 CAND2O75155 1236 aa15.62■□□□□ 0.09
TCOF1-215ENST00000515516 LGR5O75473 907 aa15.62■□□□□ 0.09
TCOF1-215ENST00000515516 CA3P07451 260 aa15.62■□□□□ 0.09
TCOF1-215ENST00000515516 RPS6KB1P23443 525 aa15.62■□□□□ 0.09
TCOF1-215ENST00000515516 CDC27P30260 824 aa15.62■□□□□ 0.09
TCOF1-215ENST00000515516 ADD1P35611 737 aaKnown RBP15.62■□□□□ 0.09
TCOF1-215ENST00000515516 WDR5P61964 334 aaKnown RBP15.62■□□□□ 0.09
TCOF1-215ENST00000515516 ARHGAP4P98171 946 aa15.62■□□□□ 0.09
TCOF1-215ENST00000515516 FUT2Q10981 343 aa15.62■□□□□ 0.09
TCOF1-215ENST00000515516 AP3B2Q13367 1082 aa15.62■□□□□ 0.09
TCOF1-215ENST00000515516 HIC1Q14526 733 aa15.62■□□□□ 0.09
TCOF1-215ENST00000515516 TRIM50Q86XT4 487 aa15.62■□□□□ 0.09
TCOF1-215ENST00000515516 CCDC12Q8WUD4 166 aaPredicted RBP15.62■□□□□ 0.09
TCOF1-215ENST00000515516 WNT8BQ93098 351 aa15.62■□□□□ 0.09
TCOF1-215ENST00000515516 MXRA8Q9BRK3 442 aa15.62■□□□□ 0.09
TCOF1-215ENST00000515516 SDF4Q9BRK5 362 aa15.62■□□□□ 0.09
TCOF1-215ENST00000515516 SMARCAD1Q9H4L7 1026 aa15.62■□□□□ 0.09
TCOF1-215ENST00000515516 FAM217BQ9NTX9 383 aaPredicted RBP15.62■□□□□ 0.09
TCOF1-215ENST00000515516 ERAP1Q9NZ08 941 aa15.62■□□□□ 0.09
TCOF1-215ENST00000515516 NRCAMQ92823 1304 aa15.62■□□□□ 0.09
TCOF1-215ENST00000515516 KIAA1217Q5T5P2 1943 aa15.61■□□□□ 0.09
TCOF1-215ENST00000515516 GPNMBQ14956 572 aa15.61■□□□□ 0.09
TCOF1-215ENST00000515516 PFKFB3Q16875 520 aaPredicted RBP15.61■□□□□ 0.09
TCOF1-215ENST00000515516 MCTP2Q6DN12 878 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms