RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 TANC1Q9C0D5 1861 aa14.59□□□□□ -0.07
CLCN3-210ENST00000515420 PITPNM1O00562 1244 aa14.59□□□□□ -0.07
CLCN3-210ENST00000515420 SLC34A2O95436 690 aa14.59□□□□□ -0.07
CLCN3-210ENST00000515420 CYP3A4P08684 503 aa14.59□□□□□ -0.07
CLCN3-210ENST00000515420 KCNA2P16389 499 aa14.59□□□□□ -0.07
CLCN3-210ENST00000515420 PSEN2P49810 448 aa14.59□□□□□ -0.07
CLCN3-210ENST00000515420 ARHGAP4P98171 946 aa14.59□□□□□ -0.07
CLCN3-210ENST00000515420 SCRN1Q12765 414 aa14.59□□□□□ -0.07
CLCN3-210ENST00000515420 STK3Q13188 491 aa14.59□□□□□ -0.07
CLCN3-210ENST00000515420 MFSD10Q14728 455 aa14.59□□□□□ -0.07
CLCN3-210ENST00000515420 CEP55Q53EZ4 464 aa14.59□□□□□ -0.07
CLCN3-210ENST00000515420 FAM47CQ5HY64 1035 aa14.59□□□□□ -0.07
CLCN3-210ENST00000515420 GALNT17Q6IS24 598 aa14.59□□□□□ -0.07
CLCN3-210ENST00000515420 GPR20Q99678 358 aa14.59□□□□□ -0.07
CLCN3-210ENST00000515420 C16orf70Q9BSU1 422 aa14.59□□□□□ -0.07
CLCN3-210ENST00000515420 TRMT13Q9NUP7 481 aaKnown RBP14.59□□□□□ -0.07
CLCN3-210ENST00000515420 GTF2IRD1Q9UHL9 959 aa14.59□□□□□ -0.07
CLCN3-210ENST00000515420 MEIS1O00470 390 aa14.58□□□□□ -0.08
CLCN3-210ENST00000515420 LGALS2P05162 132 aa14.58□□□□□ -0.08
CLCN3-210ENST00000515420 ZNF286BP0CG31 522 aa14.58□□□□□ -0.08
CLCN3-210ENST00000515420 NEK4P51957 841 aa14.58□□□□□ -0.08
CLCN3-210ENST00000515420 RBL2Q08999 1139 aa14.58□□□□□ -0.08
CLCN3-210ENST00000515420 KIAA0753Q2KHM9 967 aa14.58□□□□□ -0.08
CLCN3-210ENST00000515420 CCDC155Q8N6L0 562 aa14.58□□□□□ -0.08
CLCN3-210ENST00000515420 C7orf31Q8N865 590 aa14.58□□□□□ -0.08
CLCN3-210ENST00000515420 DAGLBQ8NCG7 672 aa14.58□□□□□ -0.08
CLCN3-210ENST00000515420 CAGE1Q8TC20 777 aa14.58□□□□□ -0.08
CLCN3-210ENST00000515420 LARP6Q9BRS8 491 aaKnown RBP14.58□□□□□ -0.08
CLCN3-210ENST00000515420 C22orf23Q9BZE7 217 aa14.58□□□□□ -0.08
CLCN3-210ENST00000515420 PPP1R12CQ9BZL4 782 aa14.58□□□□□ -0.08
CLCN3-210ENST00000515420 KCNH7Q9NS40 1196 aa14.58□□□□□ -0.08
CLCN3-210ENST00000515420 TMEM260Q9NX78 707 aa14.58□□□□□ -0.08
CLCN3-210ENST00000515420 VPS54Q9P1Q0 977 aa14.58□□□□□ -0.08
CLCN3-210ENST00000515420 PCDH10Q9P2E7 1040 aa14.58□□□□□ -0.08
CLCN3-210ENST00000515420 NFASCO94856 1347 aa14.58□□□□□ -0.08
CLCN3-210ENST00000515420 H3BRB1 525 aa14.57□□□□□ -0.08
CLCN3-210ENST00000515420 ATP9AO75110 1047 aa14.57□□□□□ -0.08
CLCN3-210ENST00000515420 SETQ01105 290 aaPredicted RBP14.57□□□□□ -0.08
CLCN3-210ENST00000515420 BFSP2Q13515 415 aa14.57□□□□□ -0.08
CLCN3-210ENST00000515420 SHHQ15465 462 aa14.57□□□□□ -0.08
CLCN3-210ENST00000515420 PTGISQ16647 500 aa14.57□□□□□ -0.08
CLCN3-210ENST00000515420 JAKMIP3Q5VZ66 844 aa14.57□□□□□ -0.08
CLCN3-210ENST00000515420 IL27Q8NEV9 243 aa14.57□□□□□ -0.08
CLCN3-210ENST00000515420 PGBD1Q96JS3 809 aa14.57□□□□□ -0.08
CLCN3-210ENST00000515420 TUT1Q9H6E5 874 aaKnown RBP14.57□□□□□ -0.08
CLCN3-210ENST00000515420 BCAS3Q9H6U6 928 aa14.57□□□□□ -0.08
CLCN3-210ENST00000515420 ZNF215Q9UL58 517 aaPredicted RBP14.57□□□□□ -0.08
CLCN3-210ENST00000515420 NOD1Q9Y239 953 aa14.57□□□□□ -0.08
CLCN3-210ENST00000515420 KAT6AQ92794 2004 aa14.57□□□□□ -0.08
CLCN3-210ENST00000515420 LAMA2P24043 3122 aaKnown RBP14.57□□□□□ -0.08
CLCN3-210ENST00000515420 TRIP12Q14669 1992 aaPredicted RBP14.56□□□□□ -0.08
CLCN3-210ENST00000515420 SORBS3O60504 671 aa14.56□□□□□ -0.08
CLCN3-210ENST00000515420 PPFIA3O75145 1194 aa14.56□□□□□ -0.08
CLCN3-210ENST00000515420 PFKMP08237 780 aa14.56□□□□□ -0.08
CLCN3-210ENST00000515420 CYP2C9P11712 490 aa14.56□□□□□ -0.08
CLCN3-210ENST00000515420 CSF2RAP15509 400 aa14.56□□□□□ -0.08
CLCN3-210ENST00000515420 XBP1P17861 261 aa14.56□□□□□ -0.08
CLCN3-210ENST00000515420 HOXC8P31273 242 aa14.56□□□□□ -0.08
CLCN3-210ENST00000515420 CIITAP33076 1130 aa14.56□□□□□ -0.08
CLCN3-210ENST00000515420 CYP2C18P33260 490 aa14.56□□□□□ -0.08
CLCN3-210ENST00000515420 RBM25P49756 843 aaKnown RBP14.56□□□□□ -0.08
CLCN3-210ENST00000515420 NLRP5P59047 1200 aa14.56□□□□□ -0.08
CLCN3-210ENST00000515420 C9orf50Q5SZB4 431 aa14.56□□□□□ -0.08
CLCN3-210ENST00000515420 GDF6Q6KF10 455 aaPredicted RBP14.56□□□□□ -0.08
CLCN3-210ENST00000515420 PSRC1Q6PGN9 363 aaPredicted RBP14.56□□□□□ -0.08
CLCN3-210ENST00000515420 SEPT1Q8WYJ6 367 aa14.56□□□□□ -0.08
CLCN3-210ENST00000515420 WASF1Q92558 559 aa14.56□□□□□ -0.08
CLCN3-210ENST00000515420 GTF3C6Q969F1 213 aa14.56□□□□□ -0.08
CLCN3-210ENST00000515420 ALG1Q9BT22 464 aa14.56□□□□□ -0.08
CLCN3-210ENST00000515420 WNT8AQ9H1J5 351 aa14.56□□□□□ -0.08
CLCN3-210ENST00000515420 JPH1Q9HDC5 661 aaPredicted RBP14.56□□□□□ -0.08
CLCN3-210ENST00000515420 IL23AQ9NPF7 189 aa14.56□□□□□ -0.08
CLCN3-210ENST00000515420 HDAC6Q9UBN7 1215 aa14.56□□□□□ -0.08
CLCN3-210ENST00000515420 SLC9A2Q9UBY0 812 aa14.56□□□□□ -0.08
CLCN3-210ENST00000515420 PCDHA4Q9UN74 947 aa14.56□□□□□ -0.08
CLCN3-210ENST00000515420 IGLV3-22A0A075B6J6 115 aa14.55□□□□□ -0.08
CLCN3-210ENST00000515420 SOX1O00570 391 aaPredicted RBP14.55□□□□□ -0.08
CLCN3-210ENST00000515420 PARNO95453 639 aaKnown RBP14.55□□□□□ -0.08
CLCN3-210ENST00000515420 RFC2P35250 354 aa14.55□□□□□ -0.08
CLCN3-210ENST00000515420 TCF7P36402 384 aaPredicted RBP14.55□□□□□ -0.08
CLCN3-210ENST00000515420 ZNF76P36508 570 aa14.55□□□□□ -0.08
CLCN3-210ENST00000515420 EPHB4P54760 987 aa14.55□□□□□ -0.08
CLCN3-210ENST00000515420 PTK7Q13308 1070 aa14.55□□□□□ -0.08
CLCN3-210ENST00000515420 ME3Q16798 604 aa14.55□□□□□ -0.08
CLCN3-210ENST00000515420 RPUSD2Q8IZ73 545 aaKnown RBP14.55□□□□□ -0.08
CLCN3-210ENST00000515420 CYP2W1Q8TAV3 490 aa14.55□□□□□ -0.08
CLCN3-210ENST00000515420 AFAP1L1Q8TED9 768 aa14.55□□□□□ -0.08
CLCN3-210ENST00000515420 CTAGE1Q96RT6 745 aa14.55□□□□□ -0.08
CLCN3-210ENST00000515420 SDF4Q9BRK5 362 aa14.55□□□□□ -0.08
CLCN3-210ENST00000515420 UMODL1Q5DID0 1318 aa14.55□□□□□ -0.08
CLCN3-210ENST00000515420 EMSYQ7Z589 1322 aa14.55□□□□□ -0.08
CLCN3-210ENST00000515420 FAM86B1E9PN63 330 aa14.54□□□□□ -0.08
CLCN3-210ENST00000515420 M0R2N6 131 aa14.54□□□□□ -0.08
CLCN3-210ENST00000515420 FAM86B2P0C5J1 330 aa14.54□□□□□ -0.08
CLCN3-210ENST00000515420 ARP10275 920 aa14.54□□□□□ -0.08
CLCN3-210ENST00000515420 USP11P51784 963 aa14.54□□□□□ -0.08
CLCN3-210ENST00000515420 CHMP4BP1P59074 171 aa14.54□□□□□ -0.08
CLCN3-210ENST00000515420 TMEM240Q5SV17 173 aa14.54□□□□□ -0.08
CLCN3-210ENST00000515420 PLA2G4DQ86XP0 818 aa14.54□□□□□ -0.08
CLCN3-210ENST00000515420 BLIDQ8IZY5 108 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms