RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 AKR1A1P14550 325 aa13.53□□□□□ -0.24
PDLIM5-220ENST00000514830 ELNP15502 786 aa13.53□□□□□ -0.24
PDLIM5-220ENST00000514830 UBA1P22314 1058 aaKnown RBP13.53□□□□□ -0.24
PDLIM5-220ENST00000514830 NKX3-2P78367 333 aa13.53□□□□□ -0.24
PDLIM5-220ENST00000514830 CACNB2Q08289 660 aaPredicted RBP13.53□□□□□ -0.24
PDLIM5-220ENST00000514830 SPIRE1Q08AE8 756 aa13.53□□□□□ -0.24
PDLIM5-220ENST00000514830 ITGB3BPQ13352 177 aaPredicted RBP13.53□□□□□ -0.24
PDLIM5-220ENST00000514830 PPP2R5CQ13362 524 aa13.53□□□□□ -0.24
PDLIM5-220ENST00000514830 STK38Q15208 465 aa13.53□□□□□ -0.24
PDLIM5-220ENST00000514830 CSPP1Q1MSJ5 1256 aa13.53□□□□□ -0.24
PDLIM5-220ENST00000514830 CCDC144BQ3MJ40 725 aa13.53□□□□□ -0.24
PDLIM5-220ENST00000514830 SEPT14Q6ZU15 432 aa13.53□□□□□ -0.24
PDLIM5-220ENST00000514830 IGSF22Q8N9C0 903 aa13.53□□□□□ -0.24
PDLIM5-220ENST00000514830 ZNF579Q8NAF0 562 aaKnown RBP13.53□□□□□ -0.24
PDLIM5-220ENST00000514830 RDM1Q8NG50 284 aa13.53□□□□□ -0.24
PDLIM5-220ENST00000514830 LEO1Q8WVC0 666 aaPredicted RBP13.53□□□□□ -0.24
PDLIM5-220ENST00000514830 SPATA32Q96LK8 384 aa13.53□□□□□ -0.24
PDLIM5-220ENST00000514830 VAV3Q9UKW4 847 aa13.53□□□□□ -0.24
PDLIM5-220ENST00000514830 FAM184BQ9ULE4 1060 aa13.53□□□□□ -0.24
PDLIM5-220ENST00000514830 MYH9P35579 1960 aaKnown RBP13.52□□□□□ -0.24
PDLIM5-220ENST00000514830 SEPT4O43236 478 aa13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 SLC26A4O43511 780 aa13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 ATP9AO75110 1047 aa13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 ARIH2O95376 493 aa13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 TXNP10599 105 aaKnown RBP13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 PRKAR2AP13861 404 aaKnown RBP13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 KRT76Q01546 638 aa13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 SP2Q02086 613 aa13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 CELF3Q5SZQ8 465 aaKnown RBP13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 LRCH2Q5VUJ6 765 aa13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 ZNF746Q6NUN9 644 aaPredicted RBP13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 METTL7BQ6UX53 244 aa13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 DTHD1Q6ZMT9 781 aa13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 EEPD1Q7L9B9 569 aa13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 KRI1Q8N9T8 703 aaKnown RBP13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 TRPV1Q8NER1 839 aa13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 ZFP91Q96JP5 570 aaPredicted RBP13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 AK8Q96MA6 479 aa13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 GBP4Q96PP9 640 aa13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 SDF4Q9BRK5 362 aa13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 TEKT3Q9BXF9 490 aa13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 RAB34Q9BZG1 259 aa13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 TTC12Q9H892 705 aaPredicted RBP13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 PDGFCQ9NRA1 345 aa13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 FBXO2Q9UK22 296 aaPredicted RBP13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 PCDHA12Q9UN75 941 aa13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 GNEQ9Y223 722 aaKnown RBP13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 STK24Q9Y6E0 443 aa13.52□□□□□ -0.25
PDLIM5-220ENST00000514830 MSCO60682 206 aa13.51□□□□□ -0.25
PDLIM5-220ENST00000514830 GAS7O60861 476 aa13.51□□□□□ -0.25
PDLIM5-220ENST00000514830 CUTAO60888 179 aa13.51□□□□□ -0.25
PDLIM5-220ENST00000514830 FARP2O94887 1054 aaPredicted RBP13.51□□□□□ -0.25
PDLIM5-220ENST00000514830 GH1P01241 217 aa13.51□□□□□ -0.25
PDLIM5-220ENST00000514830 INHAP05111 366 aa13.51□□□□□ -0.25
PDLIM5-220ENST00000514830 SMPD1P17405 629 aa13.51□□□□□ -0.25
PDLIM5-220ENST00000514830 SFNP31947 248 aa13.51□□□□□ -0.25
PDLIM5-220ENST00000514830 LONP1P36776 959 aaKnown RBP13.51□□□□□ -0.25
PDLIM5-220ENST00000514830 ADCYAP1R1P41586 468 aa13.51□□□□□ -0.25
PDLIM5-220ENST00000514830 TNFAIP2Q03169 654 aa13.51□□□□□ -0.25
PDLIM5-220ENST00000514830 CEBPZQ03701 1054 aaKnown RBP13.51□□□□□ -0.25
PDLIM5-220ENST00000514830 LAMC2Q13753 1193 aa13.51□□□□□ -0.25
PDLIM5-220ENST00000514830 IL17AQ16552 155 aa13.51□□□□□ -0.25
PDLIM5-220ENST00000514830 TMEM266Q2M3C6 531 aa13.51□□□□□ -0.25
PDLIM5-220ENST00000514830 FOXD4L6Q3SYB3 417 aaPredicted RBP13.51□□□□□ -0.25
PDLIM5-220ENST00000514830 AXDND1Q5T1B0 1012 aaPredicted RBP13.51□□□□□ -0.25
PDLIM5-220ENST00000514830 FOXD4L3Q6VB84 417 aaPredicted RBP13.51□□□□□ -0.25
PDLIM5-220ENST00000514830 SMAP1Q8IYB5 467 aaPredicted RBP13.51□□□□□ -0.25
PDLIM5-220ENST00000514830 ZHX1Q9UKY1 873 aaPredicted RBP13.51□□□□□ -0.25
PDLIM5-220ENST00000514830 ADCY6O43306 1168 aa13.5□□□□□ -0.25
PDLIM5-220ENST00000514830 MARCH6O60337 910 aa13.5□□□□□ -0.25
PDLIM5-220ENST00000514830 DUSP11O75319 330 aaKnown RBP13.5□□□□□ -0.25
PDLIM5-220ENST00000514830 ATG7O95352 703 aa13.5□□□□□ -0.25
PDLIM5-220ENST00000514830 HOXD8P13378 290 aaPredicted RBP13.5□□□□□ -0.25
PDLIM5-220ENST00000514830 NCLP19338 710 aaKnown RBP13.5□□□□□ -0.25
PDLIM5-220ENST00000514830 TXKP42681 527 aa13.5□□□□□ -0.25
PDLIM5-220ENST00000514830 ARHGAP1Q07960 439 aa13.5□□□□□ -0.25
PDLIM5-220ENST00000514830 TRIM32Q13049 653 aa13.5□□□□□ -0.25
PDLIM5-220ENST00000514830 LY6KQ17RY6 165 aa13.5□□□□□ -0.25
PDLIM5-220ENST00000514830 PRAMEF19Q5SWL8 479 aa13.5□□□□□ -0.25
PDLIM5-220ENST00000514830 ADALQ6DHV7 355 aa13.5□□□□□ -0.25
PDLIM5-220ENST00000514830 KCTD17Q8N5Z5 321 aa13.5□□□□□ -0.25
PDLIM5-220ENST00000514830 ARMC5Q96C12 935 aa13.5□□□□□ -0.25
PDLIM5-220ENST00000514830 CHAMP1Q96JM3 812 aa13.5□□□□□ -0.25
PDLIM5-220ENST00000514830 TMEM106CQ9BVX2 250 aa13.5□□□□□ -0.25
PDLIM5-220ENST00000514830 UPF3AQ9H1J1 476 aaKnown RBP13.5□□□□□ -0.25
PDLIM5-220ENST00000514830 JPH1Q9HDC5 661 aaPredicted RBP13.5□□□□□ -0.25
PDLIM5-220ENST00000514830 SLC9A2Q9UBY0 812 aa13.5□□□□□ -0.25
PDLIM5-220ENST00000514830 PCDHA7Q9UN72 937 aa13.5□□□□□ -0.25
PDLIM5-220ENST00000514830 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.49□□□□□ -0.25
PDLIM5-220ENST00000514830 A0A1W2PQ27 194 aa13.49□□□□□ -0.25
PDLIM5-220ENST00000514830 A0A1W2PQ64 194 aa13.49□□□□□ -0.25
PDLIM5-220ENST00000514830 A0A1W2PQD8 194 aa13.49□□□□□ -0.25
PDLIM5-220ENST00000514830 GGPS1O95749 300 aa13.49□□□□□ -0.25
PDLIM5-220ENST00000514830 CCNE2O96020 404 aa13.49□□□□□ -0.25
PDLIM5-220ENST00000514830 CAPN2P17655 700 aa13.49□□□□□ -0.25
PDLIM5-220ENST00000514830 MUTP22033 750 aa13.49□□□□□ -0.25
PDLIM5-220ENST00000514830 HOXD11P31277 338 aaPredicted RBP13.49□□□□□ -0.25
PDLIM5-220ENST00000514830 JAK3P52333 1124 aa13.49□□□□□ -0.25
PDLIM5-220ENST00000514830 SLC9C1Q4G0N8 1177 aa13.49□□□□□ -0.25
PDLIM5-220ENST00000514830 DHX37Q8IY37 1157 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms