RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 LTFP02788 710 aa7.28□□□□□ -1.24
HMGCS1-207ENST00000514610 PRR5P85299 388 aa7.28□□□□□ -1.24
HMGCS1-207ENST00000514610 DSG1Q02413 1049 aa7.28□□□□□ -1.24
HMGCS1-207ENST00000514610 NR1I3Q14994 352 aa7.28□□□□□ -1.24
HMGCS1-207ENST00000514610 CREB3L3Q68CJ9 461 aa7.28□□□□□ -1.24
HMGCS1-207ENST00000514610 PEX11GQ96HA9 241 aa7.28□□□□□ -1.24
HMGCS1-207ENST00000514610 BRINP2Q9C0B6 783 aa7.28□□□□□ -1.24
HMGCS1-207ENST00000514610 AP5M1Q9H0R1 490 aa7.28□□□□□ -1.24
HMGCS1-207ENST00000514610 SMOC1Q9H4F8 434 aa7.28□□□□□ -1.24
HMGCS1-207ENST00000514610 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.28□□□□□ -1.24
HMGCS1-207ENST00000514610 MYOTQ9UBF9 498 aa7.28□□□□□ -1.24
HMGCS1-207ENST00000514610 ZNF652Q9Y2D9 606 aa7.28□□□□□ -1.24
HMGCS1-207ENST00000514610 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.28□□□□□ -1.24
HMGCS1-207ENST00000514610 TCRBV5S2A0A599 114 aa7.27□□□□□ -1.25
HMGCS1-207ENST00000514610 F2P00734 622 aa7.27□□□□□ -1.25
HMGCS1-207ENST00000514610 ZBTB48P10074 688 aaPredicted RBP7.27□□□□□ -1.25
HMGCS1-207ENST00000514610 JUNBP17275 347 aaPredicted RBP7.27□□□□□ -1.25
HMGCS1-207ENST00000514610 MAPKAPK2P49137 400 aa7.27□□□□□ -1.25
HMGCS1-207ENST00000514610 IRAK1P51617 712 aa7.27□□□□□ -1.25
HMGCS1-207ENST00000514610 STRN3Q13033 797 aa7.27□□□□□ -1.25
HMGCS1-207ENST00000514610 DHCR24Q15392 516 aa7.27□□□□□ -1.25
HMGCS1-207ENST00000514610 CT47A1Q5JQC4 288 aaPredicted RBP7.27□□□□□ -1.25
HMGCS1-207ENST00000514610 CYP4F22Q6NT55 531 aa7.27□□□□□ -1.25
HMGCS1-207ENST00000514610 HHIPL2Q6UWX4 724 aa7.27□□□□□ -1.25
HMGCS1-207ENST00000514610 DDX46Q7L014 1031 aaKnown RBP7.27□□□□□ -1.25
HMGCS1-207ENST00000514610 KIF18BQ86Y91 864 aa7.27□□□□□ -1.25
HMGCS1-207ENST00000514610 NOSTRINQ8IVI9 506 aa7.27□□□□□ -1.25
HMGCS1-207ENST00000514610 C2orf69Q8N8R5 385 aa7.27□□□□□ -1.25
HMGCS1-207ENST00000514610 PANK1Q8TE04 598 aa7.27□□□□□ -1.25
HMGCS1-207ENST00000514610 TSPAN17Q96FV3 270 aa7.27□□□□□ -1.25
HMGCS1-207ENST00000514610 KCNK12Q9HB15 430 aa7.27□□□□□ -1.25
HMGCS1-207ENST00000514610 CABP5Q9NP86 173 aa7.27□□□□□ -1.25
HMGCS1-207ENST00000514610 ASH2LQ9UBL3 628 aa7.27□□□□□ -1.25
HMGCS1-207ENST00000514610 NUDT5Q9UKK9 219 aa7.27□□□□□ -1.25
HMGCS1-207ENST00000514610 PCDHB4Q9Y5E5 795 aa7.27□□□□□ -1.25
HMGCS1-207ENST00000514610 PTPDC1A2A3K4 754 aa7.26□□□□□ -1.25
HMGCS1-207ENST00000514610 EYA4O95677 639 aa7.26□□□□□ -1.25
HMGCS1-207ENST00000514610 ATP2A2P16615 1042 aaKnown RBP7.26□□□□□ -1.25
HMGCS1-207ENST00000514610 NFKB2Q00653 900 aa7.26□□□□□ -1.25
HMGCS1-207ENST00000514610 TUSC3Q13454 348 aa7.26□□□□□ -1.25
HMGCS1-207ENST00000514610 SEC23AQ15436 765 aa7.26□□□□□ -1.25
HMGCS1-207ENST00000514610 CHRNA2Q15822 529 aa7.26□□□□□ -1.25
HMGCS1-207ENST00000514610 LHFPL2Q6ZUX7 228 aa7.26□□□□□ -1.25
HMGCS1-207ENST00000514610 MILR1Q7Z6M3 343 aa7.26□□□□□ -1.25
HMGCS1-207ENST00000514610 ARRDC4Q8NCT1 418 aa7.26□□□□□ -1.25
HMGCS1-207ENST00000514610 CLEC4DQ8WXI8 215 aa7.26□□□□□ -1.25
HMGCS1-207ENST00000514610 ZNF552Q9H707 407 aaPredicted RBP7.26□□□□□ -1.25
HMGCS1-207ENST00000514610 DBR1Q9UK59 544 aaKnown RBP7.26□□□□□ -1.25
HMGCS1-207ENST00000514610 SLC12A8A0AV02 714 aa7.25□□□□□ -1.25
HMGCS1-207ENST00000514610 BPIP17213 487 aa7.25□□□□□ -1.25
HMGCS1-207ENST00000514610 VIPR1P32241 457 aa7.25□□□□□ -1.25
HMGCS1-207ENST00000514610 ADCYAP1R1P41586 468 aa7.25□□□□□ -1.25
HMGCS1-207ENST00000514610 ID4P47928 161 aa7.25□□□□□ -1.25
HMGCS1-207ENST00000514610 CDKN1CP49918 316 aaPredicted RBP7.25□□□□□ -1.25
HMGCS1-207ENST00000514610 EPHA5P54756 1037 aa7.25□□□□□ -1.25
HMGCS1-207ENST00000514610 FIGNQ5HY92 759 aa7.25□□□□□ -1.25
HMGCS1-207ENST00000514610 CPZQ66K79 652 aa7.25□□□□□ -1.25
HMGCS1-207ENST00000514610 MCTP1Q6DN14 999 aa7.25□□□□□ -1.25
HMGCS1-207ENST00000514610 MPZL3Q6UWV2 235 aa7.25□□□□□ -1.25
HMGCS1-207ENST00000514610 PRR23BQ6ZRT6 265 aa7.25□□□□□ -1.25
HMGCS1-207ENST00000514610 KCTD1Q719H9 257 aa7.25□□□□□ -1.25
HMGCS1-207ENST00000514610 ZNF605Q86T29 641 aa7.25□□□□□ -1.25
HMGCS1-207ENST00000514610 DDX42Q86XP3 938 aaKnown RBP eCLIP7.25□□□□□ -1.25
HMGCS1-207ENST00000514610 RPUSD2Q8IZ73 545 aaKnown RBP7.25□□□□□ -1.25
HMGCS1-207ENST00000514610 SMC1BQ8NDV3 1235 aa7.25□□□□□ -1.25
HMGCS1-207ENST00000514610 OR2W6PQ8NHA6 318 aa7.25□□□□□ -1.25
HMGCS1-207ENST00000514610 ZCRB1Q8TBF4 217 aaKnown RBP7.25□□□□□ -1.25
HMGCS1-207ENST00000514610 PHOSPHO1Q8TCT1 267 aa7.25□□□□□ -1.25
HMGCS1-207ENST00000514610 BOCQ9BWV1 1114 aa7.25□□□□□ -1.25
HMGCS1-207ENST00000514610 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.25□□□□□ -1.25
HMGCS1-207ENST00000514610 H2AFY2Q9P0M6 372 aaPredicted RBP7.25□□□□□ -1.25
HMGCS1-207ENST00000514610 NOP58Q9Y2X3 529 aaKnown RBP7.25□□□□□ -1.25
HMGCS1-207ENST00000514610 FAM90A27PA6NNH2 459 aa7.24□□□□□ -1.25
HMGCS1-207ENST00000514610 NEMP1O14524 444 aa7.24□□□□□ -1.25
HMGCS1-207ENST00000514610 DVL2O14641 736 aa7.24□□□□□ -1.25
HMGCS1-207ENST00000514610 KRT37O76014 449 aa7.24□□□□□ -1.25
HMGCS1-207ENST00000514610 TAL1P17542 331 aaPredicted RBP7.24□□□□□ -1.25
HMGCS1-207ENST00000514610 FBLN1P23142 703 aa7.24□□□□□ -1.25
HMGCS1-207ENST00000514610 IRF9Q00978 393 aa7.24□□□□□ -1.25
HMGCS1-207ENST00000514610 GRIN1Q05586 938 aa7.24□□□□□ -1.25
HMGCS1-207ENST00000514610 ARHGAP44Q17R89 818 aa7.24□□□□□ -1.25
HMGCS1-207ENST00000514610 ZC3H14Q6PJT7 736 aaKnown RBP7.24□□□□□ -1.25
HMGCS1-207ENST00000514610 TMC6Q7Z403 805 aa7.24□□□□□ -1.25
HMGCS1-207ENST00000514610 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.24□□□□□ -1.25
HMGCS1-207ENST00000514610 CHTF18Q8WVB6 975 aa7.24□□□□□ -1.25
HMGCS1-207ENST00000514610 DIRC2Q96SL1 478 aa7.24□□□□□ -1.25
HMGCS1-207ENST00000514610 THG1LQ9NWX6 298 aaKnown RBP7.24□□□□□ -1.25
HMGCS1-207ENST00000514610 ATP8A1Q9Y2Q0 1164 aa7.24□□□□□ -1.25
HMGCS1-207ENST00000514610 hCG_2014768A0A024R1R8 64 aa7.23□□□□□ -1.25
HMGCS1-207ENST00000514610 MYOCOSA0A1B0GUC4 107 aa7.23□□□□□ -1.25
HMGCS1-207ENST00000514610 HRKO00198 91 aa7.23□□□□□ -1.25
HMGCS1-207ENST00000514610 MAFKO60675 156 aa7.23□□□□□ -1.25
HMGCS1-207ENST00000514610 ZBTB7AO95365 584 aa7.23□□□□□ -1.25
HMGCS1-207ENST00000514610 SCNN1BP51168 640 aa7.23□□□□□ -1.25
HMGCS1-207ENST00000514610 ZNF200P98182 395 aaPredicted RBP7.23□□□□□ -1.25
HMGCS1-207ENST00000514610 SLC9A5Q14940 896 aa7.23□□□□□ -1.25
HMGCS1-207ENST00000514610 GPR101Q96P66 508 aaPredicted RBP7.23□□□□□ -1.25
HMGCS1-207ENST00000514610 PDGFDQ9GZP0 370 aaPredicted RBP7.23□□□□□ -1.25
HMGCS1-207ENST00000514610 NSUN3Q9H649 340 aaKnown RBP7.23□□□□□ -1.25
HMGCS1-207ENST00000514610 OXSMQ9NWU1 459 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms