RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 KIAA1217Q5T5P2 1943 aa16.65■□□□□ 0.26
VCAN-211ENST00000513984 FRMD3A2A2Y4 597 aa16.65■□□□□ 0.26
VCAN-211ENST00000513984 SSBP05455 408 aaKnown RBP eCLIP16.65■□□□□ 0.26
VCAN-211ENST00000513984 HMGCS2P54868 508 aa16.65■□□□□ 0.26
VCAN-211ENST00000513984 NIPA1Q7RTP0 329 aa16.65■□□□□ 0.26
VCAN-211ENST00000513984 KRT26Q7Z3Y9 468 aa16.65■□□□□ 0.26
VCAN-211ENST00000513984 CCDC65Q8IXS2 484 aa16.65■□□□□ 0.26
VCAN-211ENST00000513984 CCAR2Q8N163 923 aaKnown RBP16.65■□□□□ 0.26
VCAN-211ENST00000513984 SYT2Q8N9I0 419 aaPredicted RBP16.65■□□□□ 0.26
VCAN-211ENST00000513984 ATG4CQ96DT6 458 aa16.65■□□□□ 0.26
VCAN-211ENST00000513984 MXRA8Q9BRK3 442 aa16.65■□□□□ 0.26
VCAN-211ENST00000513984 SYT17Q9BSW7 474 aa16.65■□□□□ 0.26
VCAN-211ENST00000513984 SEMA6BQ9H3T3 888 aa16.65■□□□□ 0.26
VCAN-211ENST00000513984 ADAMTS5Q9UNA0 930 aa16.65■□□□□ 0.26
VCAN-211ENST00000513984 DNM3Q9UQ16 869 aa16.65■□□□□ 0.26
VCAN-211ENST00000513984 R3HCC1Q9Y3T6 440 aaKnown RBP16.65■□□□□ 0.26
VCAN-211ENST00000513984 USP27XA6NNY8 438 aa16.64■□□□□ 0.25
VCAN-211ENST00000513984 GOLGA8FQ08AF8 430 aa16.64■□□□□ 0.25
VCAN-211ENST00000513984 GOLGA8DPQ0D2H9 430 aa16.64■□□□□ 0.25
VCAN-211ENST00000513984 FAM26FQ5R3K3 315 aa16.64■□□□□ 0.25
VCAN-211ENST00000513984 E4F1Q66K89 784 aaPredicted RBP16.64■□□□□ 0.25
VCAN-211ENST00000513984 B3GNT9Q6UX72 402 aa16.64■□□□□ 0.25
VCAN-211ENST00000513984 FAM114A1Q8IWE2 563 aa16.64■□□□□ 0.25
VCAN-211ENST00000513984 REPS2Q8NFH8 660 aa16.64■□□□□ 0.25
VCAN-211ENST00000513984 SYTL5Q8TDW5 730 aaPredicted RBP16.64■□□□□ 0.25
VCAN-211ENST00000513984 WDR11Q9BZH6 1224 aa16.64■□□□□ 0.25
VCAN-211ENST00000513984 VPS16Q9H269 839 aa16.64■□□□□ 0.25
VCAN-211ENST00000513984 TUFT1Q9NNX1 390 aa16.64■□□□□ 0.25
VCAN-211ENST00000513984 MAGEC2Q9UBF1 373 aaPredicted RBP16.64■□□□□ 0.25
VCAN-211ENST00000513984 CTDP1Q9Y5B0 961 aaPredicted RBP16.64■□□□□ 0.25
VCAN-211ENST00000513984 LCTP09848 1927 aa16.64■□□□□ 0.25
VCAN-211ENST00000513984 LGALS16A8MUM7 142 aa16.63■□□□□ 0.25
VCAN-211ENST00000513984 GAS7O60861 476 aa16.63■□□□□ 0.25
VCAN-211ENST00000513984 USP2O75604 605 aaPredicted RBP16.63■□□□□ 0.25
VCAN-211ENST00000513984 ARP10275 920 aa16.63■□□□□ 0.25
VCAN-211ENST00000513984 MUTP22033 750 aa16.63■□□□□ 0.25
VCAN-211ENST00000513984 OAZ1P54368 228 aa16.63■□□□□ 0.25
VCAN-211ENST00000513984 PSMC6P62333 389 aa16.63■□□□□ 0.25
VCAN-211ENST00000513984 LRRC63Q05C16 580 aa16.63■□□□□ 0.25
VCAN-211ENST00000513984 ARSHQ5FYA8 562 aa16.63■□□□□ 0.25
VCAN-211ENST00000513984 PCNX4Q63HM2 1172 aa16.63■□□□□ 0.25
VCAN-211ENST00000513984 HSD17B14Q9BPX1 270 aa16.63■□□□□ 0.25
VCAN-211ENST00000513984 ZNF577Q9BSK1 485 aa16.63■□□□□ 0.25
VCAN-211ENST00000513984 AFG3L2Q9Y4W6 797 aa16.63■□□□□ 0.25
VCAN-211ENST00000513984 PCDHA2Q9Y5H9 948 aa16.63■□□□□ 0.25
VCAN-211ENST00000513984 A0A0G2JMZ2 1700 aa16.63■□□□□ 0.25
VCAN-211ENST00000513984 EYA4O95677 639 aa16.63■□□□□ 0.25
VCAN-211ENST00000513984 ITGB5P18084 799 aa16.63■□□□□ 0.25
VCAN-211ENST00000513984 DSG3P32926 999 aa16.63■□□□□ 0.25
VCAN-211ENST00000513984 IL31RAQ8NI17 732 aa16.63■□□□□ 0.25
VCAN-211ENST00000513984 WNK4Q96J92 1243 aa16.63■□□□□ 0.25
VCAN-211ENST00000513984 TRERF1Q96PN7 1200 aa16.63■□□□□ 0.25
VCAN-211ENST00000513984 PANX2Q96RD6 677 aa16.63■□□□□ 0.25
VCAN-211ENST00000513984 RIT2Q99578 217 aa16.63■□□□□ 0.25
VCAN-211ENST00000513984 HOMER2Q9NSB8 354 aa16.63■□□□□ 0.25
VCAN-211ENST00000513984 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.63■□□□□ 0.25
VCAN-211ENST00000513984 AKR1B15C9JRZ8 316 aaPredicted RBP16.62■□□□□ 0.25
VCAN-211ENST00000513984 IPO5O00410 1097 aaKnown RBP16.62■□□□□ 0.25
VCAN-211ENST00000513984 ARHGAP6O43182 974 aa16.62■□□□□ 0.25
VCAN-211ENST00000513984 STX10O60499 249 aa16.62■□□□□ 0.25
VCAN-211ENST00000513984 YBX3P16989 372 aaKnown RBP eCLIP16.62■□□□□ 0.25
VCAN-211ENST00000513984 ADKP55263 362 aaKnown RBP16.62■□□□□ 0.25
VCAN-211ENST00000513984 RPS6P62753 249 aaKnown RBP16.62■□□□□ 0.25
VCAN-211ENST00000513984 CYP4A11Q02928 519 aa16.62■□□□□ 0.25
VCAN-211ENST00000513984 PABPC4Q13310 644 aaKnown RBP eCLIP16.62■□□□□ 0.25
VCAN-211ENST00000513984 TRIM14Q14142 442 aa16.62■□□□□ 0.25
VCAN-211ENST00000513984 SH3D19Q5HYK7 790 aa16.62■□□□□ 0.25
VCAN-211ENST00000513984 NYAP1Q6ZVC0 841 aa16.62■□□□□ 0.25
VCAN-211ENST00000513984 PPFIBP1Q86W92 1011 aa16.62■□□□□ 0.25
VCAN-211ENST00000513984 MYOCDQ8IZQ8 938 aa16.62■□□□□ 0.25
VCAN-211ENST00000513984 ZNF507Q8TCN5 953 aa16.62■□□□□ 0.25
VCAN-211ENST00000513984 CNOT6LQ96LI5 555 aaKnown RBP16.62■□□□□ 0.25
VCAN-211ENST00000513984 C16orf45Q96MC5 204 aaPredicted RBP16.62■□□□□ 0.25
VCAN-211ENST00000513984 BAG1Q99933 345 aaPredicted RBP16.62■□□□□ 0.25
VCAN-211ENST00000513984 TEKT3Q9BXF9 490 aa16.62■□□□□ 0.25
VCAN-211ENST00000513984 UBIAD1Q9Y5Z9 338 aa16.62■□□□□ 0.25
VCAN-211ENST00000513984 MYPNQ86TC9 1320 aa16.62■□□□□ 0.25
VCAN-211ENST00000513984 NPHP3-ACAD11A0A0J9YXS1 232 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 A0A1W2PQC6 194 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 RBL2Q08999 1139 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 COG2Q14746 738 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 CATSPERGQ6ZRH7 1159 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 GLIS3Q8NEA6 775 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 PRIMPOLQ96LW4 560 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 UNC45AQ9H3U1 944 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 RGL1Q9NZL6 768 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 TMOD4Q9NZQ9 345 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 SNCAIPQ9Y6H5 919 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 ATP2A1O14983 1001 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 MFAP3LO75121 409 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 SLITRK3O94933 977 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 GYPCP04921 128 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 UBXN1Q04323 297 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 GIT2Q14161 759 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 EPHA7Q15375 998 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 ZCWPW2Q504Y3 356 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 CEP135Q66GS9 1140 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 SLC30A10Q6XR72 485 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 RNF207Q6ZRF8 634 aa16.61■□□□□ 0.25
VCAN-211ENST00000513984 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms