RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 CTNND2Q9UQB3 1225 aa5.97□□□□□ -1.45
NIPBL-207ENST00000513819 APOBEC2Q9Y235 224 aaKnown RBP5.97□□□□□ -1.45
NIPBL-207ENST00000513819 SIT1Q9Y3P8 196 aa5.97□□□□□ -1.45
NIPBL-207ENST00000513819 MAN2B1O00754 1011 aa5.96□□□□□ -1.46
NIPBL-207ENST00000513819 ZBTB48P10074 688 aaPredicted RBP5.96□□□□□ -1.46
NIPBL-207ENST00000513819 GLI4P10075 376 aa5.96□□□□□ -1.46
NIPBL-207ENST00000513819 RAC2P15153 192 aa5.96□□□□□ -1.46
NIPBL-207ENST00000513819 LSSP48449 732 aa5.96□□□□□ -1.46
NIPBL-207ENST00000513819 KPNA1P52294 538 aaPredicted RBP5.96□□□□□ -1.46
NIPBL-207ENST00000513819 IRF9Q00978 393 aa5.96□□□□□ -1.46
NIPBL-207ENST00000513819 EXOSC10Q01780 885 aaKnown RBP5.96□□□□□ -1.46
NIPBL-207ENST00000513819 ARHGAP44Q17R89 818 aa5.96□□□□□ -1.46
NIPBL-207ENST00000513819 ZNF792Q3KQV3 632 aa5.96□□□□□ -1.46
NIPBL-207ENST00000513819 ATP13A4Q4VNC1 1196 aa5.96□□□□□ -1.46
NIPBL-207ENST00000513819 CPZQ66K79 652 aa5.96□□□□□ -1.46
NIPBL-207ENST00000513819 NECAB2Q7Z6G3 386 aa5.96□□□□□ -1.46
NIPBL-207ENST00000513819 CABP7Q86V35 215 aa5.96□□□□□ -1.46
NIPBL-207ENST00000513819 RBM12BQ8IXT5 1001 aaKnown RBP5.96□□□□□ -1.46
NIPBL-207ENST00000513819 MYLIPQ8WY64 445 aa5.96□□□□□ -1.46
NIPBL-207ENST00000513819 SHISA4Q96DD7 197 aa5.96□□□□□ -1.46
NIPBL-207ENST00000513819 BOCQ9BWV1 1114 aa5.96□□□□□ -1.46
NIPBL-207ENST00000513819 TRIM8Q9BZR9 551 aa5.96□□□□□ -1.46
NIPBL-207ENST00000513819 SLC6A20Q9NP91 592 aa5.96□□□□□ -1.46
NIPBL-207ENST00000513819 EMC7Q9NPA0 242 aa5.96□□□□□ -1.46
NIPBL-207ENST00000513819 OXSMQ9NWU1 459 aa5.96□□□□□ -1.46
NIPBL-207ENST00000513819 DSEQ9UL01 958 aa5.96□□□□□ -1.46
NIPBL-207ENST00000513819 KRIT1O00522 736 aa5.95□□□□□ -1.46
NIPBL-207ENST00000513819 SCDO00767 359 aa5.95□□□□□ -1.46
NIPBL-207ENST00000513819 DVL2O14641 736 aa5.95□□□□□ -1.46
NIPBL-207ENST00000513819 SLC27A2O14975 620 aa5.95□□□□□ -1.46
NIPBL-207ENST00000513819 ADAM23O75077 832 aa5.95□□□□□ -1.46
NIPBL-207ENST00000513819 ITKQ08881 620 aa5.95□□□□□ -1.46
NIPBL-207ENST00000513819 MTMR1Q13613 665 aa5.95□□□□□ -1.46
NIPBL-207ENST00000513819 ODR4Q5SWX8 454 aa5.95□□□□□ -1.46
NIPBL-207ENST00000513819 STEAP3Q658P3 488 aa5.95□□□□□ -1.46
NIPBL-207ENST00000513819 HHIPL2Q6UWX4 724 aa5.95□□□□□ -1.46
NIPBL-207ENST00000513819 NOSTRINQ8IVI9 506 aa5.95□□□□□ -1.46
NIPBL-207ENST00000513819 LILRA2Q8N149 483 aa5.95□□□□□ -1.46
NIPBL-207ENST00000513819 UHMK1Q8TAS1 419 aaKnown RBP5.95□□□□□ -1.46
NIPBL-207ENST00000513819 MTMR8Q96EF0 704 aa5.95□□□□□ -1.46
NIPBL-207ENST00000513819 CCDC8Q9H0W5 538 aaPredicted RBP5.95□□□□□ -1.46
NIPBL-207ENST00000513819 RC3H2Q9HBD1 1191 aaKnown RBP5.95□□□□□ -1.46
NIPBL-207ENST00000513819 SRPK3Q9UPE1 567 aa5.95□□□□□ -1.46
NIPBL-207ENST00000513819 H7C1D1 291 aa5.94□□□□□ -1.46
NIPBL-207ENST00000513819 MARCH6O60337 910 aa5.94□□□□□ -1.46
NIPBL-207ENST00000513819 PRKD3O94806 890 aa5.94□□□□□ -1.46
NIPBL-207ENST00000513819 LTFP02788 710 aa5.94□□□□□ -1.46
NIPBL-207ENST00000513819 PNLIPP16233 465 aa5.94□□□□□ -1.46
NIPBL-207ENST00000513819 SLC9A1P19634 815 aa5.94□□□□□ -1.46
NIPBL-207ENST00000513819 SDHBP21912 280 aa5.94□□□□□ -1.46
NIPBL-207ENST00000513819 RBM10P98175 930 aaKnown RBP5.94□□□□□ -1.46
NIPBL-207ENST00000513819 OCRLQ01968 901 aa5.94□□□□□ -1.46
NIPBL-207ENST00000513819 ZMYM1Q5SVZ6 1142 aa5.94□□□□□ -1.46
NIPBL-207ENST00000513819 IQSEC1Q6DN90 963 aa5.94□□□□□ -1.46
NIPBL-207ENST00000513819 EP400NLQ6ZTU2 488 aa5.94□□□□□ -1.46
NIPBL-207ENST00000513819 HDGFL2Q7Z4V5 671 aaPredicted RBP5.94□□□□□ -1.46
NIPBL-207ENST00000513819 C11orf74Q86VG3 221 aa5.94□□□□□ -1.46
NIPBL-207ENST00000513819 CNTD1Q8N815 330 aa5.94□□□□□ -1.46
NIPBL-207ENST00000513819 JDP2Q8WYK2 163 aa5.94□□□□□ -1.46
NIPBL-207ENST00000513819 SMAD5Q99717 465 aaKnown RBP5.94□□□□□ -1.46
NIPBL-207ENST00000513819 ASPSCR1Q9BZE9 553 aa5.94□□□□□ -1.46
NIPBL-207ENST00000513819 RNF32Q9H0A6 362 aa5.94□□□□□ -1.46
NIPBL-207ENST00000513819 TELO2Q9Y4R8 837 aa5.94□□□□□ -1.46
NIPBL-207ENST00000513819 ZC3H12DA2A288 527 aaKnown RBP5.93□□□□□ -1.46
NIPBL-207ENST00000513819 HGSO14964 777 aaPredicted RBP5.93□□□□□ -1.46
NIPBL-207ENST00000513819 SGSM2O43147 1006 aa5.93□□□□□ -1.46
NIPBL-207ENST00000513819 TGM5O43548 720 aa5.93□□□□□ -1.46
NIPBL-207ENST00000513819 TADA3O75528 432 aa5.93□□□□□ -1.46
NIPBL-207ENST00000513819 DBHP09172 617 aa5.93□□□□□ -1.46
NIPBL-207ENST00000513819 ARL4AP40617 200 aa5.93□□□□□ -1.46
NIPBL-207ENST00000513819 SLC6A11P48066 632 aa5.93□□□□□ -1.46
NIPBL-207ENST00000513819 SEC23AQ15436 765 aa5.93□□□□□ -1.46
NIPBL-207ENST00000513819 FIGNQ5HY92 759 aa5.93□□□□□ -1.46
NIPBL-207ENST00000513819 EMC4Q5J8M3 183 aa5.93□□□□□ -1.46
NIPBL-207ENST00000513819 DCP2Q8IU60 420 aaKnown RBP5.93□□□□□ -1.46
NIPBL-207ENST00000513819 RAVER1Q8IY67 606 aaKnown RBP5.93□□□□□ -1.46
NIPBL-207ENST00000513819 EFHBQ8N7U6 833 aa5.93□□□□□ -1.46
NIPBL-207ENST00000513819 KIAA1958Q8N8K9 716 aa5.93□□□□□ -1.46
NIPBL-207ENST00000513819 NETO2Q8NC67 525 aa5.93□□□□□ -1.46
NIPBL-207ENST00000513819 ABHD4Q8TB40 342 aa5.93□□□□□ -1.46
NIPBL-207ENST00000513819 SEC14L1Q92503 715 aa5.93□□□□□ -1.46
NIPBL-207ENST00000513819 ELF4Q99607 663 aaPredicted RBP5.93□□□□□ -1.46
NIPBL-207ENST00000513819 PUS7LQ9H0K6 701 aaKnown RBP5.93□□□□□ -1.46
NIPBL-207ENST00000513819 SMOC1Q9H4F8 434 aa5.93□□□□□ -1.46
NIPBL-207ENST00000513819 VTA1Q9NP79 307 aa5.93□□□□□ -1.46
NIPBL-207ENST00000513819 TNFRSF12AQ9NP84 129 aa5.93□□□□□ -1.46
NIPBL-207ENST00000513819 MYOTQ9UBF9 498 aa5.93□□□□□ -1.46
NIPBL-207ENST00000513819 THRAP3Q9Y2W1 955 aaKnown RBP5.93□□□□□ -1.46
NIPBL-207ENST00000513819 ATP23Q9Y6H3 246 aa5.93□□□□□ -1.46
NIPBL-207ENST00000513819 HYAL3O43820 417 aaPredicted RBP5.92□□□□□ -1.46
NIPBL-207ENST00000513819 HIP1RO75146 1068 aa5.92□□□□□ -1.46
NIPBL-207ENST00000513819 ALDH1L1O75891 902 aa5.92□□□□□ -1.46
NIPBL-207ENST00000513819 PARNO95453 639 aaKnown RBP5.92□□□□□ -1.46
NIPBL-207ENST00000513819 KIF11P52732 1056 aa5.92□□□□□ -1.46
NIPBL-207ENST00000513819 TUSC3Q13454 348 aa5.92□□□□□ -1.46
NIPBL-207ENST00000513819 LRP8Q14114 963 aa5.92□□□□□ -1.46
NIPBL-207ENST00000513819 SNX17Q15036 470 aa5.92□□□□□ -1.46
NIPBL-207ENST00000513819 ZNF174Q15697 407 aa5.92□□□□□ -1.46
NIPBL-207ENST00000513819 CHRNA2Q15822 529 aa5.92□□□□□ -1.46
NIPBL-207ENST00000513819 DDB1Q16531 1140 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms