RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 LRRC8DQ7L1W4 858 aa8.38□□□□□ -1.07
HTT-212ENST00000513639 CYFIP1Q7L576 1253 aa8.38□□□□□ -1.07
HTT-212ENST00000513639 ZNF713Q8N859 430 aaPredicted RBP8.38□□□□□ -1.07
HTT-212ENST00000513639 IL31RAQ8NI17 732 aa8.38□□□□□ -1.07
HTT-212ENST00000513639 SYMPKQ92797 1274 aaKnown RBP8.38□□□□□ -1.07
HTT-212ENST00000513639 ATP6V0A1Q93050 837 aa8.38□□□□□ -1.07
HTT-212ENST00000513639 GPRASP2Q96D09 838 aa8.38□□□□□ -1.07
HTT-212ENST00000513639 C16orf70Q9BSU1 422 aa8.38□□□□□ -1.07
HTT-212ENST00000513639 TSPYL2Q9H2G4 693 aaPredicted RBP8.38□□□□□ -1.07
HTT-212ENST00000513639 ZNF215Q9UL58 517 aaPredicted RBP8.38□□□□□ -1.07
HTT-212ENST00000513639 V9GY48 417 aaPredicted RBP8.38□□□□□ -1.07
HTT-212ENST00000513639 CDH23Q9H251 3354 aa8.38□□□□□ -1.07
HTT-212ENST00000513639 LTBP2Q14767 1821 aa8.38□□□□□ -1.07
HTT-212ENST00000513639 BDP1A6H8Y1 2624 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 FRMPD4Q14CM0 1322 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 C17orf102A2RUQ5 167 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 RSPH10B2B2RC85 870 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 CAND2O75155 1236 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 REC8O95072 547 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 PLEKHA8P1O95397 391 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 CXCL10P02778 98 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 RSPH10BP0C881 870 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 ZNF286BP0CG31 522 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 PSMA5P28066 241 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 RTN1Q16799 776 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 PPP2R2DQ66LE6 453 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 MCTP2Q6DN12 878 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 CNKSR3Q6P9H4 555 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 APOA5Q6Q788 366 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 HEATR3Q7Z4Q2 680 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 SERINC5Q86VE9 423 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 MICU3Q86XE3 530 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 CMTR1Q8N1G2 835 aaKnown RBP8.37□□□□□ -1.07
HTT-212ENST00000513639 SEPT1Q8WYJ6 367 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 VWCEQ96DN2 955 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 ZFP91Q96JP5 570 aaPredicted RBP8.37□□□□□ -1.07
HTT-212ENST00000513639 GPR20Q99678 358 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 ZBED2Q9BTP6 218 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 LRRC2Q9BYS8 371 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 NKX2-4Q9H2Z4 354 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 RNPEPQ9H4A4 650 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 PCDHA6Q9UN73 950 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 PCDHA8Q9Y5H6 950 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 TRANK1O15050 2925 aa8.37□□□□□ -1.07
HTT-212ENST00000513639 LAMA4Q16363 1823 aa8.36□□□□□ -1.07
HTT-212ENST00000513639 SCN10AQ9Y5Y9 1956 aa8.36□□□□□ -1.07
HTT-212ENST00000513639 EPB41L2O43491 1005 aaKnown RBP8.36□□□□□ -1.07
HTT-212ENST00000513639 SORBS3O60504 671 aa8.36□□□□□ -1.07
HTT-212ENST00000513639 LGALS2P05162 132 aa8.36□□□□□ -1.07
HTT-212ENST00000513639 RPLP2P05387 115 aaKnown RBP8.36□□□□□ -1.07
HTT-212ENST00000513639 RXRAP19793 462 aa8.36□□□□□ -1.07
HTT-212ENST00000513639 IGFBP4P22692 258 aa8.36□□□□□ -1.07
HTT-212ENST00000513639 THPOP40225 353 aa8.36□□□□□ -1.07
HTT-212ENST00000513639 NUBP1P53384 320 aa8.36□□□□□ -1.07
HTT-212ENST00000513639 RABGGTBP53611 331 aa8.36□□□□□ -1.07
HTT-212ENST00000513639 NAPAP54920 295 aa8.36□□□□□ -1.07
HTT-212ENST00000513639 MTMR1Q13613 665 aa8.36□□□□□ -1.07
HTT-212ENST00000513639 PPP1R18Q6NYC8 613 aa8.36□□□□□ -1.07
HTT-212ENST00000513639 RSPH3Q86UC2 560 aa8.36□□□□□ -1.07
HTT-212ENST00000513639 HERC6Q8IVU3 1022 aa8.36□□□□□ -1.07
HTT-212ENST00000513639 RASEFQ8IZ41 740 aa8.36□□□□□ -1.07
HTT-212ENST00000513639 FBXL16Q8N461 479 aa8.36□□□□□ -1.07
HTT-212ENST00000513639 PPP1R13LQ8WUF5 828 aa8.36□□□□□ -1.07
HTT-212ENST00000513639 GPKOWQ92917 476 aaPredicted RBP eCLIP8.36□□□□□ -1.07
HTT-212ENST00000513639 KCNB2Q92953 911 aa8.36□□□□□ -1.07
HTT-212ENST00000513639 CTAGE1Q96RT6 745 aa8.36□□□□□ -1.07
HTT-212ENST00000513639 RAD9AQ99638 391 aa8.36□□□□□ -1.07
HTT-212ENST00000513639 PRDM12Q9H4Q4 367 aa8.36□□□□□ -1.07
HTT-212ENST00000513639 RIC8AQ9NPQ8 531 aa8.36□□□□□ -1.07
HTT-212ENST00000513639 JADE2Q9NQC1 790 aa8.36□□□□□ -1.07
HTT-212ENST00000513639 YBX2Q9Y2T7 364 aaKnown RBP8.36□□□□□ -1.07
HTT-212ENST00000513639 NCOR1O75376 2440 aa8.36□□□□□ -1.07
HTT-212ENST00000513639 VCANP13611 3396 aa8.36□□□□□ -1.07
HTT-212ENST00000513639 CHD7Q9P2D1 2997 aa8.35□□□□□ -1.07
HTT-212ENST00000513639 NRCAMQ92823 1304 aa8.35□□□□□ -1.07
HTT-212ENST00000513639 KLF18A0A0U1RQI7 1052 aa8.35□□□□□ -1.07
HTT-212ENST00000513639 hCG_1642624A0A1W2PR95 340 aa8.35□□□□□ -1.07
HTT-212ENST00000513639 SMCO2A6NFE2 343 aa8.35□□□□□ -1.07
HTT-212ENST00000513639 GTPBP6O43824 516 aaPredicted RBP8.35□□□□□ -1.07
HTT-212ENST00000513639 TLL1O43897 1013 aa8.35□□□□□ -1.07
HTT-212ENST00000513639 LGR5O75473 907 aa8.35□□□□□ -1.07
HTT-212ENST00000513639 NEFLP07196 543 aa8.35□□□□□ -1.07
HTT-212ENST00000513639 SMIM10L2AP0DMW4 78 aa8.35□□□□□ -1.07
HTT-212ENST00000513639 SMIM10L2BP0DMW5 78 aa8.35□□□□□ -1.07
HTT-212ENST00000513639 ITGB5P18084 799 aa8.35□□□□□ -1.07
HTT-212ENST00000513639 POU3F3P20264 500 aaPredicted RBP8.35□□□□□ -1.07
HTT-212ENST00000513639 ZNF76P36508 570 aa8.35□□□□□ -1.07
HTT-212ENST00000513639 ADCY7P51828 1080 aa8.35□□□□□ -1.07
HTT-212ENST00000513639 ZNF200P98182 395 aaPredicted RBP8.35□□□□□ -1.07
HTT-212ENST00000513639 AKAP17AQ02040 695 aaKnown RBP8.35□□□□□ -1.07
HTT-212ENST00000513639 GPNMBQ14956 572 aa8.35□□□□□ -1.07
HTT-212ENST00000513639 TRIM71Q2Q1W2 868 aaKnown RBP8.35□□□□□ -1.07
HTT-212ENST00000513639 ZNF618Q5T7W0 954 aa8.35□□□□□ -1.07
HTT-212ENST00000513639 UTP14CQ5TAP6 766 aaKnown RBP8.35□□□□□ -1.07
HTT-212ENST00000513639 BLOC1S2Q6QNY1 142 aa8.35□□□□□ -1.07
HTT-212ENST00000513639 FAM43BQ6ZT52 329 aaPredicted RBP8.35□□□□□ -1.07
HTT-212ENST00000513639 CCDC12Q8WUD4 166 aaPredicted RBP8.35□□□□□ -1.07
HTT-212ENST00000513639 SEPT8Q92599 483 aa8.35□□□□□ -1.07
HTT-212ENST00000513639 DHX38Q92620 1227 aaKnown RBP8.35□□□□□ -1.07
HTT-212ENST00000513639 GLG1Q92896 1179 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms