RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 PPATQ06203 517 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 STK4Q13043 487 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 TPD52L1Q16890 204 aaPredicted RBP9.34□□□□□ -0.91
RNF4-220ENST00000513578 FILIP1LQ4L180 1135 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 MUM1L1Q5H9M0 696 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 PRAMEF18Q5VWM3 479 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 KLHL10Q6JEL2 608 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 TTI2Q6NXR4 508 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 LBX2Q6XYB7 198 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 TMC6Q7Z403 805 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 SMYD4Q8IYR2 804 aaPredicted RBP9.34□□□□□ -0.91
RNF4-220ENST00000513578 PROCA1Q8NCQ7 364 aaPredicted RBP9.34□□□□□ -0.91
RNF4-220ENST00000513578 KIAA0895Q8NCT3 520 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 ANKRD20A12PQ8NF67 263 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 CYP2W1Q8TAV3 490 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 DDX12PQ92771 950 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 ATG4CQ96DT6 458 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 ZNF830Q96NB3 372 aaPredicted RBP9.34□□□□□ -0.91
RNF4-220ENST00000513578 TRERF1Q96PN7 1200 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 TEKT3Q9BXF9 490 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 JADE2Q9NQC1 790 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 INTS13Q9NVM9 706 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 COL20A1Q9P218 1284 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 ZNF214Q9UL59 606 aaPredicted RBP9.34□□□□□ -0.91
RNF4-220ENST00000513578 KIAA1024Q9UPX6 916 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 DNM3Q9UQ16 869 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 CSADQ9Y600 493 aa9.34□□□□□ -0.91
RNF4-220ENST00000513578 POTEB3A0JP26 581 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 GLTPD2A6NH11 291 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 POTECB2RU33 542 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 E9PMD0 336 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 IRF6O14896 467 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 MAFGO15525 162 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 STAM2O75886 525 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 KIF20AO95235 890 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 CYP11B2P19099 503 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 EPHX2P34913 555 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 NF2P35240 595 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 APLP1P51693 650 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 STX17P56962 302 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 RPS6P62753 249 aaKnown RBP9.33□□□□□ -0.92
RNF4-220ENST00000513578 CCZ1BP86790 482 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 CCZ1P86791 482 aaPredicted RBP9.33□□□□□ -0.92
RNF4-220ENST00000513578 LRRC63Q05C16 580 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 DGKZQ13574 1117 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 VGLL4Q14135 290 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 NOLC1Q14978 699 aaKnown RBP eCLIP9.33□□□□□ -0.92
RNF4-220ENST00000513578 TCP11X2Q5H9J9 407 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 LRCH2Q5VUJ6 765 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 SPECC1LQ69YQ0 1117 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 NCAPH2Q6IBW4 605 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 POTEBQ6S5H4 581 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 RNF207Q6ZRF8 634 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.33□□□□□ -0.92
RNF4-220ENST00000513578 FILIP1Q7Z7B0 1213 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 IRF2BP1Q8IU81 584 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 FAM114A1Q8IWE2 563 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 CCDC65Q8IXS2 484 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 ANKRD13AQ8IZ07 590 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 CPXCR1Q8N123 301 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 MB21D1Q8N884 522 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 CCDC112Q8NEF3 446 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 GJA10Q969M2 543 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 DUSP9Q99956 384 aaKnown RBP9.33□□□□□ -0.92
RNF4-220ENST00000513578 EIF2AK1Q9BQI3 630 aaKnown RBP9.33□□□□□ -0.92
RNF4-220ENST00000513578 TEX13BQ9BXU2 312 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 TMX1Q9H3N1 280 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 RNF146Q9NTX7 359 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 TBC1D22BQ9NU19 505 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 KCND2Q9NZV8 630 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 KCNH4Q9UQ05 1017 aa9.33□□□□□ -0.92
RNF4-220ENST00000513578 A0A0G2JLL6 359 aaPredicted RBP9.32□□□□□ -0.92
RNF4-220ENST00000513578 IQCA1LA6NCM1 817 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 SPDYE5A6NIY4 337 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 SPDYE16A6NNV3 312 aaPredicted RBP9.32□□□□□ -0.92
RNF4-220ENST00000513578 KCNJ18B7U540 433 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 IPO5O00410 1097 aaKnown RBP9.32□□□□□ -0.92
RNF4-220ENST00000513578 EML1O00423 815 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 DHX15O43143 795 aaKnown RBP9.32□□□□□ -0.92
RNF4-220ENST00000513578 NRDCO43847 1150 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 GAS7O60861 476 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 SLITRK3O94933 977 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 LYPLA2O95372 231 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 FGFR1OPO95684 399 aaKnown RBP9.32□□□□□ -0.92
RNF4-220ENST00000513578 ARP10275 920 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 ITGB5P18084 799 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 SFPQP23246 707 aaKnown RBP eCLIP9.32□□□□□ -0.92
RNF4-220ENST00000513578 STAT3P40763 770 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 COPB1P53618 953 aaKnown RBP9.32□□□□□ -0.92
RNF4-220ENST00000513578 MRPS9P82933 396 aaKnown RBP9.32□□□□□ -0.92
RNF4-220ENST00000513578 COASYQ13057 564 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 KCNJ12Q14500 433 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 TMEM132BQ14DG7 1078 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 PGM5Q15124 567 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 KRT31Q15323 416 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 ARSHQ5FYA8 562 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 ARMCX5Q6P1M9 558 aa9.32□□□□□ -0.92
RNF4-220ENST00000513578 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.32□□□□□ -0.92
RNF4-220ENST00000513578 PRRT2Q7Z6L0 340 aaPredicted RBP9.32□□□□□ -0.92
RNF4-220ENST00000513578 ERO1BQ86YB8 467 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms