RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 MRPL11Q9Y3B7 192 aaKnown RBP12.79□□□□□ -0.36
DDX41-216ENST00000513562 MYO15AQ9UKN7 3530 aa12.79□□□□□ -0.36
DDX41-216ENST00000513562 TRIP12Q14669 1992 aaPredicted RBP12.79□□□□□ -0.36
DDX41-216ENST00000513562 ZMYM6O95789 1325 aa12.79□□□□□ -0.36
DDX41-216ENST00000513562 ADGRA3Q8IWK6 1321 aa12.79□□□□□ -0.36
DDX41-216ENST00000513562 LINC01565O15544 149 aa12.78□□□□□ -0.36
DDX41-216ENST00000513562 GFRA3O60609 400 aa12.78□□□□□ -0.36
DDX41-216ENST00000513562 GGPS1O95749 300 aa12.78□□□□□ -0.36
DDX41-216ENST00000513562 MMP1P03956 469 aa12.78□□□□□ -0.36
DDX41-216ENST00000513562 SMIM10L2AP0DMW4 78 aa12.78□□□□□ -0.36
DDX41-216ENST00000513562 SMIM10L2BP0DMW5 78 aa12.78□□□□□ -0.36
DDX41-216ENST00000513562 HSPD1P10809 573 aaKnown RBP12.78□□□□□ -0.36
DDX41-216ENST00000513562 UBA1P22314 1058 aaKnown RBP12.78□□□□□ -0.36
DDX41-216ENST00000513562 HSD17B4P51659 736 aa12.78□□□□□ -0.36
DDX41-216ENST00000513562 ZXDAP98168 799 aa12.78□□□□□ -0.36
DDX41-216ENST00000513562 GHRHRQ02643 423 aa12.78□□□□□ -0.36
DDX41-216ENST00000513562 ADGRF4Q8IZF3 695 aa12.78□□□□□ -0.36
DDX41-216ENST00000513562 MIER1Q8N108 512 aa12.78□□□□□ -0.36
DDX41-216ENST00000513562 FBXL6Q8N531 539 aa12.78□□□□□ -0.36
DDX41-216ENST00000513562 PDCD2LQ9BRP1 358 aa12.78□□□□□ -0.36
DDX41-216ENST00000513562 LOC730098B7Z3J9 87 aa12.77□□□□□ -0.37
DDX41-216ENST00000513562 H3BRB1 525 aa12.77□□□□□ -0.37
DDX41-216ENST00000513562 OPLAHO14841 1288 aa12.77□□□□□ -0.37
DDX41-216ENST00000513562 SORBS3O60504 671 aa12.77□□□□□ -0.37
DDX41-216ENST00000513562 PCP11498 1178 aaKnown RBP12.77□□□□□ -0.37
DDX41-216ENST00000513562 FOXK2Q01167 660 aa12.77□□□□□ -0.37
DDX41-216ENST00000513562 SP2Q02086 613 aa12.77□□□□□ -0.37
DDX41-216ENST00000513562 ADAM15Q13444 863 aa12.77□□□□□ -0.37
DDX41-216ENST00000513562 CAMK1Q14012 370 aa12.77□□□□□ -0.37
DDX41-216ENST00000513562 CBX2Q14781 532 aaPredicted RBP12.77□□□□□ -0.37
DDX41-216ENST00000513562 QRICH1Q2TAL8 776 aa12.77□□□□□ -0.37
DDX41-216ENST00000513562 FAM26DQ5JW98 314 aa12.77□□□□□ -0.37
DDX41-216ENST00000513562 C20orf194Q5TEA3 1177 aa12.77□□□□□ -0.37
DDX41-216ENST00000513562 DGKHQ86XP1 1220 aa12.77□□□□□ -0.37
DDX41-216ENST00000513562 RNPEPQ9H4A4 650 aa12.77□□□□□ -0.37
DDX41-216ENST00000513562 IGFLR1Q9H665 355 aa12.77□□□□□ -0.37
DDX41-216ENST00000513562 TUT1Q9H6E5 874 aaKnown RBP12.77□□□□□ -0.37
DDX41-216ENST00000513562 HELLSQ9NRZ9 838 aa12.77□□□□□ -0.37
DDX41-216ENST00000513562 MICAL3Q7RTP6 2002 aa12.77□□□□□ -0.37
DDX41-216ENST00000513562 TECTAO75443 2155 aa12.76□□□□□ -0.37
DDX41-216ENST00000513562 CFBP00751 764 aa12.76□□□□□ -0.37
DDX41-216ENST00000513562 LGALS2P05162 132 aa12.76□□□□□ -0.37
DDX41-216ENST00000513562 TGFB3P10600 412 aa12.76□□□□□ -0.37
DDX41-216ENST00000513562 MX1P20591 662 aa12.76□□□□□ -0.37
DDX41-216ENST00000513562 NDUFV1P49821 464 aa12.76□□□□□ -0.37
DDX41-216ENST00000513562 HAND2P61296 217 aa12.76□□□□□ -0.37
DDX41-216ENST00000513562 STOX1Q6ZVD7 989 aa12.76□□□□□ -0.37
DDX41-216ENST00000513562 VSIG10LQ86VR7 867 aa12.76□□□□□ -0.37
DDX41-216ENST00000513562 TBC1D10CQ8IV04 446 aa12.76□□□□□ -0.37
DDX41-216ENST00000513562 SMRP1Q8NCR6 262 aa12.76□□□□□ -0.37
DDX41-216ENST00000513562 PNMA1Q8ND90 353 aa12.76□□□□□ -0.37
DDX41-216ENST00000513562 ZNF689Q96CS4 500 aaPredicted RBP12.76□□□□□ -0.37
DDX41-216ENST00000513562 PLVAPQ9BX97 442 aa12.76□□□□□ -0.37
DDX41-216ENST00000513562 FAM86C1Q9NVL1 165 aa12.76□□□□□ -0.37
DDX41-216ENST00000513562 CLEC1BQ9P126 229 aa12.76□□□□□ -0.37
DDX41-216ENST00000513562 CCDC171Q6TFL3 1326 aa12.76□□□□□ -0.37
DDX41-216ENST00000513562 GNAT1P11488 350 aa12.75□□□□□ -0.37
DDX41-216ENST00000513562 MYCLP12524 364 aaPredicted RBP12.75□□□□□ -0.37
DDX41-216ENST00000513562 NEDD4P46934 1319 aa12.75□□□□□ -0.37
DDX41-216ENST00000513562 VCPP55072 806 aaKnown RBP12.75□□□□□ -0.37
DDX41-216ENST00000513562 COASYQ13057 564 aa12.75□□□□□ -0.37
DDX41-216ENST00000513562 ASPRV1Q53RT3 343 aa12.75□□□□□ -0.37
DDX41-216ENST00000513562 MFSD6Q6ZSS7 791 aa12.75□□□□□ -0.37
DDX41-216ENST00000513562 EFHBQ8N7U6 833 aa12.75□□□□□ -0.37
DDX41-216ENST00000513562 IL31RAQ8NI17 732 aa12.75□□□□□ -0.37
DDX41-216ENST00000513562 PPP2R3CQ969Q6 453 aa12.75□□□□□ -0.37
DDX41-216ENST00000513562 ZKSCAN3Q9BRR0 538 aa12.75□□□□□ -0.37
DDX41-216ENST00000513562 SALL3Q9BXA9 1300 aa12.75□□□□□ -0.37
DDX41-216ENST00000513562 JMJD4Q9H9V9 463 aa12.75□□□□□ -0.37
DDX41-216ENST00000513562 MLXIPQ9HAP2 919 aa12.75□□□□□ -0.37
DDX41-216ENST00000513562 PLAGL2Q9UPG8 496 aa12.75□□□□□ -0.37
DDX41-216ENST00000513562 A0A0D9SFI3 127 aa12.74□□□□□ -0.37
DDX41-216ENST00000513562 CSPG5O95196 566 aa12.74□□□□□ -0.37
DDX41-216ENST00000513562 RRP1P56182 461 aaKnown RBP12.74□□□□□ -0.37
DDX41-216ENST00000513562 ADAM17P78536 824 aa12.74□□□□□ -0.37
DDX41-216ENST00000513562 SIGLEC14Q08ET2 396 aa12.74□□□□□ -0.37
DDX41-216ENST00000513562 BTG3Q14201 252 aaPredicted RBP12.74□□□□□ -0.37
DDX41-216ENST00000513562 PGM5Q15124 567 aa12.74□□□□□ -0.37
DDX41-216ENST00000513562 ESR2Q92731 530 aa12.74□□□□□ -0.37
DDX41-216ENST00000513562 GPKOWQ92917 476 aaPredicted RBP eCLIP12.74□□□□□ -0.37
DDX41-216ENST00000513562 P2RX5Q93086 422 aa12.74□□□□□ -0.37
DDX41-216ENST00000513562 EVI5LQ96CN4 794 aa12.74□□□□□ -0.37
DDX41-216ENST00000513562 ASIC4Q96FT7 647 aa12.74□□□□□ -0.37
DDX41-216ENST00000513562 FAM227BQ96M60 508 aa12.74□□□□□ -0.37
DDX41-216ENST00000513562 IRF2BPLQ9H1B7 796 aa12.74□□□□□ -0.37
DDX41-216ENST00000513562 RNF41Q9H4P4 317 aaPredicted RBP12.74□□□□□ -0.37
DDX41-216ENST00000513562 EHMT1Q9H9B1 1298 aa12.74□□□□□ -0.37
DDX41-216ENST00000513562 SETD4Q9NVD3 440 aa12.74□□□□□ -0.37
DDX41-216ENST00000513562 MAP3K20Q9NYL2 800 aaKnown RBP12.74□□□□□ -0.37
DDX41-216ENST00000513562 RALGAPA2Q2PPJ7 1873 aa12.74□□□□□ -0.37
DDX41-216ENST00000513562 DGKIO75912 1065 aa12.73□□□□□ -0.37
DDX41-216ENST00000513562 CHRNA1P02708 482 aa12.73□□□□□ -0.37
DDX41-216ENST00000513562 GHRP10912 638 aa12.73□□□□□ -0.37
DDX41-216ENST00000513562 DNAJB1P25685 340 aa12.73□□□□□ -0.37
DDX41-216ENST00000513562 CCND2P30279 289 aa12.73□□□□□ -0.37
DDX41-216ENST00000513562 NT5C2P49902 561 aa12.73□□□□□ -0.37
DDX41-216ENST00000513562 MCMDC2Q4G0Z9 681 aa12.73□□□□□ -0.37
DDX41-216ENST00000513562 NAALADL2Q58DX5 795 aa12.73□□□□□ -0.37
DDX41-216ENST00000513562 METTL7BQ6UX53 244 aa12.73□□□□□ -0.37
DDX41-216ENST00000513562 ADGRD2Q7Z7M1 963 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms