RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 PDE6AP16499 860 aa3.29□□□□□ -1.88
RNF4-219ENST00000513450 CNGA1P29973 690 aa3.29□□□□□ -1.88
RNF4-219ENST00000513450 GJA4P35212 333 aa3.29□□□□□ -1.88
RNF4-219ENST00000513450 MECP2P51608 486 aaKnown RBP3.29□□□□□ -1.88
RNF4-219ENST00000513450 EPHA5P54756 1037 aa3.29□□□□□ -1.88
RNF4-219ENST00000513450 SART3Q15020 963 aaKnown RBP3.29□□□□□ -1.88
RNF4-219ENST00000513450 PCBP1Q15365 356 aaKnown RBP eCLIP3.29□□□□□ -1.88
RNF4-219ENST00000513450 FIGNQ5HY92 759 aa3.29□□□□□ -1.88
RNF4-219ENST00000513450 CT47A1Q5JQC4 288 aaPredicted RBP3.29□□□□□ -1.88
RNF4-219ENST00000513450 PKN3Q6P5Z2 889 aa3.29□□□□□ -1.88
RNF4-219ENST00000513450 ZC3H14Q6PJT7 736 aaKnown RBP3.29□□□□□ -1.88
RNF4-219ENST00000513450 MPZL3Q6UWV2 235 aa3.29□□□□□ -1.88
RNF4-219ENST00000513450 HHIPL2Q6UWX4 724 aa3.29□□□□□ -1.88
RNF4-219ENST00000513450 RPTNQ6XPR3 784 aa3.29□□□□□ -1.88
RNF4-219ENST00000513450 ARHGAP36Q6ZRI8 547 aa3.29□□□□□ -1.88
RNF4-219ENST00000513450 EP400NLQ6ZTU2 488 aa3.29□□□□□ -1.88
RNF4-219ENST00000513450 OTOP1Q7RTM1 612 aa3.29□□□□□ -1.88
RNF4-219ENST00000513450 OSTM1Q86WC4 334 aa3.29□□□□□ -1.88
RNF4-219ENST00000513450 AFAP1L2Q8N4X5 818 aa3.29□□□□□ -1.88
RNF4-219ENST00000513450 OR2W6PQ8NHA6 318 aa3.29□□□□□ -1.88
RNF4-219ENST00000513450 LEO1Q8WVC0 666 aaPredicted RBP3.29□□□□□ -1.88
RNF4-219ENST00000513450 ZNF552Q9H707 407 aaPredicted RBP3.29□□□□□ -1.88
RNF4-219ENST00000513450 MYOTQ9UBF9 498 aa3.29□□□□□ -1.88
RNF4-219ENST00000513450 ASH2LQ9UBL3 628 aa3.29□□□□□ -1.88
RNF4-219ENST00000513450 B4GALT6Q9UBX8 382 aa3.29□□□□□ -1.88
RNF4-219ENST00000513450 PALD1Q9ULE6 856 aa3.29□□□□□ -1.88
RNF4-219ENST00000513450 ZKSCAN5Q9Y2L8 839 aa3.29□□□□□ -1.88
RNF4-219ENST00000513450 NOP58Q9Y2X3 529 aaKnown RBP3.29□□□□□ -1.88
RNF4-219ENST00000513450 PCDHB4Q9Y5E5 795 aa3.29□□□□□ -1.88
RNF4-219ENST00000513450 COL4A3BPQ9Y5P4 624 aa3.29□□□□□ -1.88
RNF4-219ENST00000513450 ARID1BQ8NFD5 2236 aaPredicted RBP3.29□□□□□ -1.88
RNF4-219ENST00000513450 CARMIL2Q6F5E8 1435 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 TCRBV5S2A0A599 114 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 TCRBV5S4A2TA0A5A2 114 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 SLC12A8A0AV02 714 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 ZNF503-AS2A6NEH8 195 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.28□□□□□ -1.88
RNF4-219ENST00000513450 SLC27A2O14975 620 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 ZEB2O60315 1214 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 BRINP1O60477 761 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 PEX10O60683 326 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 GAS7O60861 476 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 CLASP2O75122 1294 aaKnown RBP3.28□□□□□ -1.88
RNF4-219ENST00000513450 AMY2AP04746 511 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 COL6A2P12110 1019 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 AMY2BP19961 511 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 SDHBP21912 280 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 SCNN1BP51168 640 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 JAM2P57087 298 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 PRR5P85299 388 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 NFKB2Q00653 900 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 AMPD3Q01432 767 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 SEPT7Q16181 437 aaKnown RBP3.28□□□□□ -1.88
RNF4-219ENST00000513450 PLEKHN1Q494U1 663 aaPredicted RBP3.28□□□□□ -1.88
RNF4-219ENST00000513450 KCTD1Q719H9 257 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 MILR1Q7Z6M3 343 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 PTRH1Q86Y79 214 aaKnown RBP3.28□□□□□ -1.88
RNF4-219ENST00000513450 CISD2Q8N5K1 135 aaKnown RBP3.28□□□□□ -1.88
RNF4-219ENST00000513450 TTLL11Q8NHH1 800 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 SCYL1Q96KG9 808 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 BOCQ9BWV1 1114 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.28□□□□□ -1.88
RNF4-219ENST00000513450 SMURF1Q9HCE7 757 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 PCDH12Q9NPG4 1184 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 SRPK3Q9UPE1 567 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 SIT1Q9Y3P8 196 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 ATP23Q9Y6H3 246 aa3.28□□□□□ -1.88
RNF4-219ENST00000513450 hCG_2014768A0A024R1R8 64 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 PTPDC1A2A3K4 754 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 H7C1D1 291 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 MAN2B1O00754 1011 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 HIP1RO75146 1068 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 EYA4O95677 639 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 BPIP17213 487 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 KRT15P19012 456 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 JAG1P78504 1218 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 OCRLQ01968 901 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 DSG1Q02413 1049 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 TUSC3Q13454 348 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.27□□□□□ -1.89
RNF4-219ENST00000513450 ZNF605Q86T29 641 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 AMIGO3Q86WK7 504 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 MIB1Q86YT6 1006 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 NOSTRINQ8IVI9 506 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 ANKRD13AQ8IZ07 590 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 UBR7Q8N806 425 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 SMC1BQ8NDV3 1235 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 SH3RF2Q8TEC5 729 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 USP7Q93009 1102 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 LIN37Q96GY3 246 aaPredicted RBP3.27□□□□□ -1.89
RNF4-219ENST00000513450 GPATCH3Q96I76 525 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 TTC1Q99614 292 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 RNF38Q9H0F5 515 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 IFT22Q9H7X7 185 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 RXFP1Q9HBX9 757 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 NGRNQ9NPE2 291 aaKnown RBP3.27□□□□□ -1.89
RNF4-219ENST00000513450 HSPBP1Q9NZL4 362 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 MCM8Q9UJA3 840 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 ATP8A1Q9Y2Q0 1164 aa3.27□□□□□ -1.89
RNF4-219ENST00000513450 TEX51A0A1B0GUA7 166 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms