RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 ACVRL1P37023 503 aa5.21□□□□□ -1.58
PDLIM5-218ENST00000513341 GDF5P43026 501 aa5.21□□□□□ -1.58
PDLIM5-218ENST00000513341 FOXO4P98177 505 aa5.21□□□□□ -1.58
PDLIM5-218ENST00000513341 DLX2Q07687 328 aaPredicted RBP5.21□□□□□ -1.58
PDLIM5-218ENST00000513341 KIR3DS1Q14943 382 aa5.21□□□□□ -1.58
PDLIM5-218ENST00000513341 NBPF9Q3BBW0 867 aa5.21□□□□□ -1.58
PDLIM5-218ENST00000513341 C9orf131Q5VYM1 1079 aa5.21□□□□□ -1.58
PDLIM5-218ENST00000513341 REV1Q9UBZ9 1251 aa5.21□□□□□ -1.58
PDLIM5-218ENST00000513341 GPR55Q9Y2T6 319 aaPredicted RBP5.21□□□□□ -1.58
PDLIM5-218ENST00000513341 QRICH2Q9H0J4 1663 aa5.21□□□□□ -1.58
PDLIM5-218ENST00000513341 EVC2Q86UK5 1308 aa5.21□□□□□ -1.58
PDLIM5-218ENST00000513341 KIAA1210Q9ULL0 1709 aa5.2□□□□□ -1.58
PDLIM5-218ENST00000513341 NSD2O96028 1365 aa5.2□□□□□ -1.58
PDLIM5-218ENST00000513341 NFAT5O94916 1531 aa5.2□□□□□ -1.58
PDLIM5-218ENST00000513341 CHURC1-FNTBB4DL54 471 aa5.2□□□□□ -1.58
PDLIM5-218ENST00000513341 PATL2C9JE40 543 aaKnown RBP5.2□□□□□ -1.58
PDLIM5-218ENST00000513341 ZNF200P98182 395 aaPredicted RBP5.2□□□□□ -1.58
PDLIM5-218ENST00000513341 ZPBP2Q6X784 338 aa5.2□□□□□ -1.58
PDLIM5-218ENST00000513341 IP6K1Q92551 441 aa5.2□□□□□ -1.58
PDLIM5-218ENST00000513341 ASB16Q96NS5 453 aa5.2□□□□□ -1.58
PDLIM5-218ENST00000513341 NOC4LQ9BVI4 516 aaKnown RBP5.2□□□□□ -1.58
PDLIM5-218ENST00000513341 TRAIPQ9BWF2 469 aa5.2□□□□□ -1.58
PDLIM5-218ENST00000513341 MRIQ9BWK5 157 aa5.2□□□□□ -1.58
PDLIM5-218ENST00000513341 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.2□□□□□ -1.58
PDLIM5-218ENST00000513341 ERVK13-1Q9NX77 482 aa5.2□□□□□ -1.58
PDLIM5-218ENST00000513341 BIN2Q9UBW5 565 aaPredicted RBP5.2□□□□□ -1.58
PDLIM5-218ENST00000513341 PMF1-BGLAPU3KQ54 211 aa5.2□□□□□ -1.58
PDLIM5-218ENST00000513341 USP54Q70EL1 1684 aa5.2□□□□□ -1.58
PDLIM5-218ENST00000513341 TAF1LQ8IZX4 1826 aa5.2□□□□□ -1.58
PDLIM5-218ENST00000513341 KIF13BQ9NQT8 1826 aa5.2□□□□□ -1.58
PDLIM5-218ENST00000513341 C5P01031 1676 aa5.19□□□□□ -1.58
PDLIM5-218ENST00000513341 TNRC6CQ9HCJ0 1690 aaKnown RBP5.19□□□□□ -1.58
PDLIM5-218ENST00000513341 A0A0G2JLW4 131 aa5.19□□□□□ -1.58
PDLIM5-218ENST00000513341 GLTPD2A6NH11 291 aa5.19□□□□□ -1.58
PDLIM5-218ENST00000513341 SIGLEC6O43699 453 aa5.19□□□□□ -1.58
PDLIM5-218ENST00000513341 SLPIP03973 132 aa5.19□□□□□ -1.58
PDLIM5-218ENST00000513341 C6P13671 934 aa5.19□□□□□ -1.58
PDLIM5-218ENST00000513341 GNA15P30679 374 aa5.19□□□□□ -1.58
PDLIM5-218ENST00000513341 CTCFP49711 727 aaPredicted RBP5.19□□□□□ -1.58
PDLIM5-218ENST00000513341 GJA9P57773 515 aa5.19□□□□□ -1.58
PDLIM5-218ENST00000513341 TMC3Q7Z5M5 1100 aa5.19□□□□□ -1.58
PDLIM5-218ENST00000513341 LSRQ86X29 649 aaPredicted RBP5.19□□□□□ -1.58
PDLIM5-218ENST00000513341 CARFQ8N187 725 aa5.19□□□□□ -1.58
PDLIM5-218ENST00000513341 NUP43Q8NFH3 380 aa5.19□□□□□ -1.58
PDLIM5-218ENST00000513341 JARID2Q92833 1246 aaPredicted RBP5.19□□□□□ -1.58
PDLIM5-218ENST00000513341 SCAND2PQ9GZW5 306 aaPredicted RBP5.19□□□□□ -1.58
PDLIM5-218ENST00000513341 ARFGEF1Q9Y6D6 1849 aa5.18□□□□□ -1.58
PDLIM5-218ENST00000513341 FAM208AQ9UK61 1670 aaKnown RBP5.18□□□□□ -1.58
PDLIM5-218ENST00000513341 KTN1Q86UP2 1357 aaKnown RBP5.18□□□□□ -1.58
PDLIM5-218ENST00000513341 A0A1B0GTL3 188 aa5.18□□□□□ -1.58
PDLIM5-218ENST00000513341 FKTNO75072 461 aa5.18□□□□□ -1.58
PDLIM5-218ENST00000513341 ZNF205O95201 554 aa5.18□□□□□ -1.58
PDLIM5-218ENST00000513341 BPNT1O95861 308 aa5.18□□□□□ -1.58
PDLIM5-218ENST00000513341 CYBBP04839 570 aa5.18□□□□□ -1.58
PDLIM5-218ENST00000513341 MMP10P09238 476 aa5.18□□□□□ -1.58
PDLIM5-218ENST00000513341 KCNA3P22001 575 aa5.18□□□□□ -1.58
PDLIM5-218ENST00000513341 GBP1P32455 592 aa5.18□□□□□ -1.58
PDLIM5-218ENST00000513341 TMF1P82094 1093 aa5.18□□□□□ -1.58
PDLIM5-218ENST00000513341 DALRD3Q5D0E6 543 aaKnown RBP5.18□□□□□ -1.58
PDLIM5-218ENST00000513341 NBPF12Q5TAG4 269 aaPredicted RBP5.18□□□□□ -1.58
PDLIM5-218ENST00000513341 CRIP3Q6Q6R5 217 aa5.18□□□□□ -1.58
PDLIM5-218ENST00000513341 PAQR3Q6TCH7 311 aa5.18□□□□□ -1.58
PDLIM5-218ENST00000513341 PHACTR4Q8IZ21 702 aa5.18□□□□□ -1.58
PDLIM5-218ENST00000513341 Q8N1X5 172 aa5.18□□□□□ -1.58
PDLIM5-218ENST00000513341 PHC3Q8NDX5 983 aa5.18□□□□□ -1.58
PDLIM5-218ENST00000513341 GATAD2BQ8WXI9 593 aa5.18□□□□□ -1.58
PDLIM5-218ENST00000513341 DVL3Q92997 716 aaPredicted RBP5.18□□□□□ -1.58
PDLIM5-218ENST00000513341 KIF2CQ99661 725 aa5.18□□□□□ -1.58
PDLIM5-218ENST00000513341 SBF1O95248 1867 aa5.17□□□□□ -1.58
PDLIM5-218ENST00000513341 UBR3Q6ZT12 1888 aa5.17□□□□□ -1.58
PDLIM5-218ENST00000513341 PALLDQ8WX93 1383 aa5.17□□□□□ -1.58
PDLIM5-218ENST00000513341 C4BP0C0L5 1744 aa5.17□□□□□ -1.58
PDLIM5-218ENST00000513341 LTN1O94822 1766 aa5.17□□□□□ -1.58
PDLIM5-218ENST00000513341 FOXN1O15353 648 aa5.17□□□□□ -1.58
PDLIM5-218ENST00000513341 HTR3BO95264 441 aa5.17□□□□□ -1.58
PDLIM5-218ENST00000513341 PRAMEF1O95521 474 aa5.17□□□□□ -1.58
PDLIM5-218ENST00000513341 BRD1O95696 1058 aa5.17□□□□□ -1.58
PDLIM5-218ENST00000513341 PLATP00750 562 aa5.17□□□□□ -1.58
PDLIM5-218ENST00000513341 ATF2P15336 505 aa5.17□□□□□ -1.58
PDLIM5-218ENST00000513341 DPEP1P16444 411 aa5.17□□□□□ -1.58
PDLIM5-218ENST00000513341 BMP8BP34820 402 aa5.17□□□□□ -1.58
PDLIM5-218ENST00000513341 CHMP4BP1P59074 171 aa5.17□□□□□ -1.58
PDLIM5-218ENST00000513341 RAD51AP2Q09MP3 1159 aa5.17□□□□□ -1.58
PDLIM5-218ENST00000513341 ADGRG2Q8IZP9 1017 aa5.17□□□□□ -1.58
PDLIM5-218ENST00000513341 ABHD8Q96I13 439 aa5.17□□□□□ -1.58
PDLIM5-218ENST00000513341 RNF181Q9P0P0 153 aa5.17□□□□□ -1.58
PDLIM5-218ENST00000513341 AK5Q9Y6K8 562 aa5.17□□□□□ -1.58
PDLIM5-218ENST00000513341 BRCA1P38398 1863 aaKnown RBP5.17□□□□□ -1.58
PDLIM5-218ENST00000513341 KCPQ6ZWJ8 1503 aa5.17□□□□□ -1.58
PDLIM5-218ENST00000513341 DOT1LQ8TEK3 1739 aa5.17□□□□□ -1.58
PDLIM5-218ENST00000513341 N4BP2Q86UW6 1770 aaPredicted RBP5.16□□□□□ -1.58
PDLIM5-218ENST00000513341 UBOX5O94941 541 aa5.16□□□□□ -1.58
PDLIM5-218ENST00000513341 NCAM1P13591 858 aa5.16□□□□□ -1.58
PDLIM5-218ENST00000513341 LMNB2Q03252 620 aa5.16□□□□□ -1.58
PDLIM5-218ENST00000513341 MAP3K11Q16584 847 aa5.16□□□□□ -1.58
PDLIM5-218ENST00000513341 RAPGEF4Q8WZA2 1011 aa5.16□□□□□ -1.58
PDLIM5-218ENST00000513341 DDX1Q92499 740 aaKnown RBP5.16□□□□□ -1.58
PDLIM5-218ENST00000513341 C8orf49Q96NF6 230 aa5.16□□□□□ -1.58
PDLIM5-218ENST00000513341 PRDM14Q9GZV8 571 aa5.16□□□□□ -1.58
PDLIM5-218ENST00000513341 PRR13Q9NZ81 148 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms