RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 CUTAO60888 179 aa14.15□□□□□ -0.15
PDPN-210ENST00000513143 ARIH2O95376 493 aa14.15□□□□□ -0.15
PDPN-210ENST00000513143 HSPA1AP0DMV8 641 aaKnown RBP14.15□□□□□ -0.15
PDPN-210ENST00000513143 HSPA1BP0DMV9 641 aaKnown RBP14.15□□□□□ -0.15
PDPN-210ENST00000513143 MCM4P33991 863 aa14.15□□□□□ -0.15
PDPN-210ENST00000513143 TECP42680 631 aa14.15□□□□□ -0.15
PDPN-210ENST00000513143 SP2Q02086 613 aa14.15□□□□□ -0.15
PDPN-210ENST00000513143 GRIN1Q05586 938 aa14.15□□□□□ -0.15
PDPN-210ENST00000513143 ITGB3BPQ13352 177 aaPredicted RBP14.15□□□□□ -0.15
PDPN-210ENST00000513143 PDIA5Q14554 519 aa14.15□□□□□ -0.15
PDPN-210ENST00000513143 LRCH2Q5VUJ6 765 aa14.15□□□□□ -0.15
PDPN-210ENST00000513143 MFSD14CQ5VZR4 134 aa14.15□□□□□ -0.15
PDPN-210ENST00000513143 ADALQ6DHV7 355 aa14.15□□□□□ -0.15
PDPN-210ENST00000513143 ZNF579Q8NAF0 562 aaKnown RBP14.15□□□□□ -0.15
PDPN-210ENST00000513143 RAET1EQ8TD07 263 aa14.15□□□□□ -0.15
PDPN-210ENST00000513143 CLIC6Q96NY7 704 aa14.15□□□□□ -0.15
PDPN-210ENST00000513143 TBC1D22BQ9NU19 505 aa14.15□□□□□ -0.15
PDPN-210ENST00000513143 DDX41Q9UJV9 622 aaKnown RBP14.15□□□□□ -0.15
PDPN-210ENST00000513143 VAV3Q9UKW4 847 aa14.15□□□□□ -0.15
PDPN-210ENST00000513143 TRIM17Q9Y577 477 aa14.15□□□□□ -0.15
PDPN-210ENST00000513143 WDR81Q562E7 1941 aa14.14□□□□□ -0.15
PDPN-210ENST00000513143 C19orf67A6NJJ6 358 aa14.14□□□□□ -0.15
PDPN-210ENST00000513143 GOLGA6L22H0YM25 854 aa14.14□□□□□ -0.15
PDPN-210ENST00000513143 ADCY3O60266 1144 aa14.14□□□□□ -0.15
PDPN-210ENST00000513143 GAS7O60861 476 aa14.14□□□□□ -0.15
PDPN-210ENST00000513143 PRPF40AO75400 957 aaKnown RBP14.14□□□□□ -0.15
PDPN-210ENST00000513143 ZNF865P0CJ78 1059 aaPredicted RBP14.14□□□□□ -0.15
PDPN-210ENST00000513143 LONP1P36776 959 aaKnown RBP14.14□□□□□ -0.15
PDPN-210ENST00000513143 CTCFP49711 727 aaPredicted RBP14.14□□□□□ -0.15
PDPN-210ENST00000513143 SPIRE1Q08AE8 756 aa14.14□□□□□ -0.15
PDPN-210ENST00000513143 TTLL4Q14679 1199 aa14.14□□□□□ -0.15
PDPN-210ENST00000513143 TMEM266Q2M3C6 531 aa14.14□□□□□ -0.15
PDPN-210ENST00000513143 PRAMEF19Q5SWL8 479 aa14.14□□□□□ -0.15
PDPN-210ENST00000513143 IQSEC1Q6DN90 963 aa14.14□□□□□ -0.15
PDPN-210ENST00000513143 B3GNT9Q6UX72 402 aa14.14□□□□□ -0.15
PDPN-210ENST00000513143 IGSF22Q8N9C0 903 aa14.14□□□□□ -0.15
PDPN-210ENST00000513143 GIMAP8Q8ND71 665 aaPredicted RBP14.14□□□□□ -0.15
PDPN-210ENST00000513143 TEKT3Q9BXF9 490 aa14.14□□□□□ -0.15
PDPN-210ENST00000513143 RAB34Q9BZG1 259 aa14.14□□□□□ -0.15
PDPN-210ENST00000513143 CSRNP2Q9H175 543 aa14.14□□□□□ -0.15
PDPN-210ENST00000513143 LMBRD1Q9NUN5 540 aa14.14□□□□□ -0.15
PDPN-210ENST00000513143 TXNP10599 105 aaKnown RBP14.13□□□□□ -0.15
PDPN-210ENST00000513143 ELNP15502 786 aa14.13□□□□□ -0.15
PDPN-210ENST00000513143 UBA1P22314 1058 aaKnown RBP14.13□□□□□ -0.15
PDPN-210ENST00000513143 ADCYAP1R1P41586 468 aa14.13□□□□□ -0.15
PDPN-210ENST00000513143 PPP2R5CQ13362 524 aa14.13□□□□□ -0.15
PDPN-210ENST00000513143 NEDD9Q14511 834 aa14.13□□□□□ -0.15
PDPN-210ENST00000513143 LY6KQ17RY6 165 aa14.13□□□□□ -0.15
PDPN-210ENST00000513143 SLAIN1Q8ND83 568 aa14.13□□□□□ -0.15
PDPN-210ENST00000513143 AK8Q96MA6 479 aa14.13□□□□□ -0.15
PDPN-210ENST00000513143 SDF4Q9BRK5 362 aa14.13□□□□□ -0.15
PDPN-210ENST00000513143 PKD2L1Q9P0L9 805 aa14.13□□□□□ -0.15
PDPN-210ENST00000513143 ZHX1Q9UKY1 873 aaPredicted RBP14.13□□□□□ -0.15
PDPN-210ENST00000513143 A0A1W2PQ27 194 aa14.12□□□□□ -0.15
PDPN-210ENST00000513143 A0A1W2PQ64 194 aa14.12□□□□□ -0.15
PDPN-210ENST00000513143 A0A1W2PQD8 194 aa14.12□□□□□ -0.15
PDPN-210ENST00000513143 GADD45BO75293 160 aaPredicted RBP14.12□□□□□ -0.15
PDPN-210ENST00000513143 HMGCRP04035 888 aa14.12□□□□□ -0.15
PDPN-210ENST00000513143 CYBAP13498 195 aa14.12□□□□□ -0.15
PDPN-210ENST00000513143 CMA1P23946 247 aa14.12□□□□□ -0.15
PDPN-210ENST00000513143 LBX1P52954 281 aa14.12□□□□□ -0.15
PDPN-210ENST00000513143 UBE2HP62256 183 aa14.12□□□□□ -0.15
PDPN-210ENST00000513143 KRT76Q01546 638 aa14.12□□□□□ -0.15
PDPN-210ENST00000513143 CACNB2Q08289 660 aaPredicted RBP14.12□□□□□ -0.15
PDPN-210ENST00000513143 CCDC144BQ3MJ40 725 aa14.12□□□□□ -0.15
PDPN-210ENST00000513143 CELF3Q5SZQ8 465 aaKnown RBP14.12□□□□□ -0.15
PDPN-210ENST00000513143 SHC4Q6S5L8 630 aa14.12□□□□□ -0.15
PDPN-210ENST00000513143 TRPV1Q8NER1 839 aa14.12□□□□□ -0.15
PDPN-210ENST00000513143 UNC45AQ9H3U1 944 aa14.12□□□□□ -0.15
PDPN-210ENST00000513143 BCAS3Q9H6U6 928 aa14.12□□□□□ -0.15
PDPN-210ENST00000513143 PTPN22Q9Y2R2 807 aa14.12□□□□□ -0.15
PDPN-210ENST00000513143 PTCH2Q9Y6C5 1203 aa14.12□□□□□ -0.15
PDPN-210ENST00000513143 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.11□□□□□ -0.15
PDPN-210ENST00000513143 GOLGA6L4A6NEF3 574 aa14.11□□□□□ -0.15
PDPN-210ENST00000513143 POTEMA6NI47 508 aa14.11□□□□□ -0.15
PDPN-210ENST00000513143 DDX11L8A8MPP1 907 aa14.11□□□□□ -0.15
PDPN-210ENST00000513143 DDX39AO00148 427 aaKnown RBP14.11□□□□□ -0.15
PDPN-210ENST00000513143 NKRFO15226 690 aaKnown RBP eCLIP14.11□□□□□ -0.15
PDPN-210ENST00000513143 FARP2O94887 1054 aaPredicted RBP14.11□□□□□ -0.15
PDPN-210ENST00000513143 GGPS1O95749 300 aa14.11□□□□□ -0.15
PDPN-210ENST00000513143 SMPD1P17405 629 aa14.11□□□□□ -0.15
PDPN-210ENST00000513143 TNFAIP2Q03169 654 aa14.11□□□□□ -0.15
PDPN-210ENST00000513143 TRIM32Q13049 653 aa14.11□□□□□ -0.15
PDPN-210ENST00000513143 DUSP28Q4G0W2 176 aa14.11□□□□□ -0.15
PDPN-210ENST00000513143 SPECC1Q5M775 1068 aa14.11□□□□□ -0.15
PDPN-210ENST00000513143 TMEM63BQ5T3F8 832 aa14.11□□□□□ -0.15
PDPN-210ENST00000513143 MAP3K21Q5TCX8 1036 aa14.11□□□□□ -0.15
PDPN-210ENST00000513143 RESP18Q5W5W9 173 aa14.11□□□□□ -0.15
PDPN-210ENST00000513143 ZNF746Q6NUN9 644 aaPredicted RBP14.11□□□□□ -0.15
PDPN-210ENST00000513143 METTL7BQ6UX53 244 aa14.11□□□□□ -0.15
PDPN-210ENST00000513143 CYFIP1Q7L576 1253 aa14.11□□□□□ -0.15
PDPN-210ENST00000513143 JPH1Q9HDC5 661 aaPredicted RBP14.11□□□□□ -0.15
PDPN-210ENST00000513143 SLC9A2Q9UBY0 812 aa14.11□□□□□ -0.15
PDPN-210ENST00000513143 LRWD1Q9UFC0 647 aa14.11□□□□□ -0.15
PDPN-210ENST00000513143 FAM184BQ9ULE4 1060 aa14.11□□□□□ -0.15
PDPN-210ENST00000513143 HTTP42858 3142 aa14.11□□□□□ -0.15
PDPN-210ENST00000513143 FAM237AA0A1B0GTK4 181 aa14.1□□□□□ -0.15
PDPN-210ENST00000513143 PP2D1A8MPX8 630 aa14.1□□□□□ -0.15
PDPN-210ENST00000513143 EML1O00423 815 aa14.1□□□□□ -0.15
PDPN-210ENST00000513143 CCNE2O96020 404 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms