RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 CYTH3O43739 400 aa14.51□□□□□ -0.09
VEGFA-216ENST00000512683 RPLP2P05387 115 aaKnown RBP14.51□□□□□ -0.09
VEGFA-216ENST00000512683 ZNF200P98182 395 aaPredicted RBP14.51□□□□□ -0.09
VEGFA-216ENST00000512683 MKRN4PQ13434 485 aaPredicted RBP14.51□□□□□ -0.09
VEGFA-216ENST00000512683 MBTPS1Q14703 1052 aa14.51□□□□□ -0.09
VEGFA-216ENST00000512683 PTPROQ16827 1216 aa14.51□□□□□ -0.09
VEGFA-216ENST00000512683 PUS10Q3MIT2 529 aaKnown RBP14.51□□□□□ -0.09
VEGFA-216ENST00000512683 RPAINQ86UA6 219 aa14.51□□□□□ -0.09
VEGFA-216ENST00000512683 NLRX1Q86UT6 975 aa14.51□□□□□ -0.09
VEGFA-216ENST00000512683 FCHSD1Q86WN1 690 aa14.51□□□□□ -0.09
VEGFA-216ENST00000512683 HOMER1Q86YM7 354 aa14.51□□□□□ -0.09
VEGFA-216ENST00000512683 CUL5Q93034 780 aa14.51□□□□□ -0.09
VEGFA-216ENST00000512683 TOP1MTQ969P6 601 aa14.51□□□□□ -0.09
VEGFA-216ENST00000512683 CDHR1Q96JP9 859 aa14.51□□□□□ -0.09
VEGFA-216ENST00000512683 SPZ1Q9BXG8 430 aa14.51□□□□□ -0.09
VEGFA-216ENST00000512683 RNPEPQ9H4A4 650 aa14.51□□□□□ -0.09
VEGFA-216ENST00000512683 ZNF215Q9UL58 517 aaPredicted RBP14.51□□□□□ -0.09
VEGFA-216ENST00000512683 TAF6LQ9Y6J9 622 aa14.51□□□□□ -0.09
VEGFA-216ENST00000512683 KIAA1217Q5T5P2 1943 aa14.51□□□□□ -0.09
VEGFA-216ENST00000512683 BAZ2BQ9UIF8 2168 aaKnown RBP14.5□□□□□ -0.09
VEGFA-216ENST00000512683 LCHNA4D1U4 455 aa14.5□□□□□ -0.09
VEGFA-216ENST00000512683 E7EWF7 191 aa14.5□□□□□ -0.09
VEGFA-216ENST00000512683 LGALS2P05162 132 aa14.5□□□□□ -0.09
VEGFA-216ENST00000512683 SMIM10L2AP0DMW4 78 aa14.5□□□□□ -0.09
VEGFA-216ENST00000512683 SMIM10L2BP0DMW5 78 aa14.5□□□□□ -0.09
VEGFA-216ENST00000512683 KCNQ1P51787 676 aa14.5□□□□□ -0.09
VEGFA-216ENST00000512683 MRPS9P82933 396 aaKnown RBP14.5□□□□□ -0.09
VEGFA-216ENST00000512683 SLC35G1Q2M3R5 365 aa14.5□□□□□ -0.09
VEGFA-216ENST00000512683 FAM26DQ5JW98 314 aa14.5□□□□□ -0.09
VEGFA-216ENST00000512683 PCNX4Q63HM2 1172 aa14.5□□□□□ -0.09
VEGFA-216ENST00000512683 IGDCC4Q8TDY8 1250 aa14.5□□□□□ -0.09
VEGFA-216ENST00000512683 MAP4K1Q92918 833 aa14.5□□□□□ -0.09
VEGFA-216ENST00000512683 RRP36Q96EU6 259 aaKnown RBP14.5□□□□□ -0.09
VEGFA-216ENST00000512683 CHD7Q9P2D1 2997 aa14.5□□□□□ -0.09
VEGFA-216ENST00000512683 PRRC2BQ5JSZ5 2229 aaKnown RBP14.49□□□□□ -0.09
VEGFA-216ENST00000512683 NRCAMQ92823 1304 aa14.49□□□□□ -0.09
VEGFA-216ENST00000512683 NCK2O43639 380 aa14.49□□□□□ -0.09
VEGFA-216ENST00000512683 DDAH1O94760 285 aa14.49□□□□□ -0.09
VEGFA-216ENST00000512683 LEXMQ3ZCV2 418 aa14.49□□□□□ -0.09
VEGFA-216ENST00000512683 KRT40Q6A162 431 aa14.49□□□□□ -0.09
VEGFA-216ENST00000512683 FBXO22Q8NEZ5 403 aa14.49□□□□□ -0.09
VEGFA-216ENST00000512683 IL31RAQ8NI17 732 aa14.49□□□□□ -0.09
VEGFA-216ENST00000512683 CTCFLQ8NI51 663 aaPredicted RBP14.49□□□□□ -0.09
VEGFA-216ENST00000512683 SMARCC2Q8TAQ2 1214 aa14.49□□□□□ -0.09
VEGFA-216ENST00000512683 TNPO1Q92973 898 aaKnown RBP14.49□□□□□ -0.09
VEGFA-216ENST00000512683 WNT8BQ93098 351 aa14.49□□□□□ -0.09
VEGFA-216ENST00000512683 GPR20Q99678 358 aa14.49□□□□□ -0.09
VEGFA-216ENST00000512683 TREHO43280 583 aa14.48□□□□□ -0.09
VEGFA-216ENST00000512683 CALM1P0DP23 149 aa14.48□□□□□ -0.09
VEGFA-216ENST00000512683 CALM2P0DP24 149 aa14.48□□□□□ -0.09
VEGFA-216ENST00000512683 CALM3P0DP25 149 aa14.48□□□□□ -0.09
VEGFA-216ENST00000512683 ADAM17P78536 824 aa14.48□□□□□ -0.09
VEGFA-216ENST00000512683 HIC1Q14526 733 aa14.48□□□□□ -0.09
VEGFA-216ENST00000512683 TCTN1Q2MV58 587 aa14.48□□□□□ -0.09
VEGFA-216ENST00000512683 TAF2Q6P1X5 1199 aa14.48□□□□□ -0.09
VEGFA-216ENST00000512683 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.48□□□□□ -0.09
VEGFA-216ENST00000512683 CYFIP1Q7L576 1253 aa14.48□□□□□ -0.09
VEGFA-216ENST00000512683 MYOCDQ8IZQ8 938 aa14.48□□□□□ -0.09
VEGFA-216ENST00000512683 GPRASP2Q96D09 838 aa14.48□□□□□ -0.09
VEGFA-216ENST00000512683 MRPL38Q96DV4 380 aaKnown RBP14.48□□□□□ -0.09
VEGFA-216ENST00000512683 SEC63Q9UGP8 760 aaKnown RBP14.48□□□□□ -0.09
VEGFA-216ENST00000512683 H3BNC9 293 aa14.47□□□□□ -0.09
VEGFA-216ENST00000512683 GPR37L1O60883 481 aa14.47□□□□□ -0.09
VEGFA-216ENST00000512683 RB1P06400 928 aa14.47□□□□□ -0.09
VEGFA-216ENST00000512683 CASC1Q6TDU7 716 aa14.47□□□□□ -0.09
VEGFA-216ENST00000512683 TMCO2Q7Z6W1 182 aaPredicted RBP14.47□□□□□ -0.09
VEGFA-216ENST00000512683 RSPH3Q86UC2 560 aa14.47□□□□□ -0.09
VEGFA-216ENST00000512683 MB21D2Q8IYB1 491 aaPredicted RBP14.47□□□□□ -0.09
VEGFA-216ENST00000512683 GPKOWQ92917 476 aaPredicted RBP eCLIP14.47□□□□□ -0.092e-6■■□□□ 12
VEGFA-216ENST00000512683 TMEM87BQ96K49 555 aa14.47□□□□□ -0.09
VEGFA-216ENST00000512683 NECAB3Q96P71 396 aaPredicted RBP14.47□□□□□ -0.09
VEGFA-216ENST00000512683 YME1L1Q96TA2 773 aa14.47□□□□□ -0.09
VEGFA-216ENST00000512683 UBE2ZQ9H832 354 aaPredicted RBP14.47□□□□□ -0.09
VEGFA-216ENST00000512683 RWDD3Q9Y3V2 267 aa14.47□□□□□ -0.09
VEGFA-216ENST00000512683 MYH7BA7E2Y1 1941 aa14.47□□□□□ -0.09
VEGFA-216ENST00000512683 MEIS2O14770 477 aa14.46□□□□□ -0.09
VEGFA-216ENST00000512683 MCM5P33992 734 aa14.46□□□□□ -0.09
VEGFA-216ENST00000512683 LIFRP42702 1097 aa14.46□□□□□ -0.09
VEGFA-216ENST00000512683 SEMA3FQ13275 785 aa14.46□□□□□ -0.09
VEGFA-216ENST00000512683 EPC2Q52LR7 807 aa14.46□□□□□ -0.09
VEGFA-216ENST00000512683 TIGD5Q53EQ6 642 aa14.46□□□□□ -0.09
VEGFA-216ENST00000512683 TMEM31Q5JXX7 168 aa14.46□□□□□ -0.09
VEGFA-216ENST00000512683 FAM117BQ6P1L5 589 aa14.46□□□□□ -0.09
VEGFA-216ENST00000512683 SKAP1Q86WV1 359 aa14.46□□□□□ -0.09
VEGFA-216ENST00000512683 GDPD5Q8WTR4 605 aa14.46□□□□□ -0.09
VEGFA-216ENST00000512683 SEPT1Q8WYJ6 367 aa14.46□□□□□ -0.09
VEGFA-216ENST00000512683 PSTPIP2Q9H939 334 aa14.46□□□□□ -0.09
VEGFA-216ENST00000512683 SENP2Q9HC62 589 aa14.46□□□□□ -0.09
VEGFA-216ENST00000512683 SETD4Q9NVD3 440 aa14.46□□□□□ -0.09
VEGFA-216ENST00000512683 RTEL1Q9NZ71 1219 aa14.46□□□□□ -0.09
VEGFA-216ENST00000512683 FAM50BQ9Y247 325 aa14.46□□□□□ -0.09
VEGFA-216ENST00000512683 SQORQ9Y6N5 450 aa14.46□□□□□ -0.09
VEGFA-216ENST00000512683 PI4K2BG5E9Z4 385 aa14.45□□□□□ -0.1
VEGFA-216ENST00000512683 PLA2G5P39877 138 aa14.45□□□□□ -0.1
VEGFA-216ENST00000512683 SPRED2Q7Z698 418 aa14.45□□□□□ -0.1
VEGFA-216ENST00000512683 ZNF654Q8IZM8 581 aa14.45□□□□□ -0.1
VEGFA-216ENST00000512683 FAM122AQ96E09 287 aa14.45□□□□□ -0.1
VEGFA-216ENST00000512683 IL17RAQ96F46 866 aa14.45□□□□□ -0.1
VEGFA-216ENST00000512683 IFIH1Q9BYX4 1025 aaKnown RBP14.45□□□□□ -0.1
VEGFA-216ENST00000512683 LMAN2LQ9H0V9 348 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms