RNA–Protein interactions for RNA: ENST00000512620.5

CAST-238, Transcript of calpastatin, human

TSL 5

Gene CAST, Length 904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-238	ENST00000512620	C2orf69	Q8N8R5	385 aa		4.64	□□□□□ -1.67
CAST-238	ENST00000512620	CHST14	Q8NCH0	376 aa		4.64	□□□□□ -1.67
CAST-238	ENST00000512620	PIP4K2C	Q8TBX8	421 aa		4.64	□□□□□ -1.67
CAST-238	ENST00000512620	PLEKHO2	Q8TD55	490 aa		4.64	□□□□□ -1.67
CAST-238	ENST00000512620	MTMR8	Q96EF0	704 aa		4.64	□□□□□ -1.67
CAST-238	ENST00000512620	TTC1	Q99614	292 aa		4.64	□□□□□ -1.67
CAST-238	ENST00000512620	MTA3	Q9BTC8	594 aa		4.64	□□□□□ -1.67
CAST-238	ENST00000512620	TRIM8	Q9BZR9	551 aa		4.64	□□□□□ -1.67
CAST-238	ENST00000512620	CD244	Q9BZW8	370 aa		4.64	□□□□□ -1.67
CAST-238	ENST00000512620	CRTAC1	Q9NQ79	661 aa		4.64	□□□□□ -1.67
CAST-238	ENST00000512620	PAK6	Q9NQU5	681 aa	Predicted RBP	4.64	□□□□□ -1.67
CAST-238	ENST00000512620	SPTLC3	Q9NUV7	552 aa		4.64	□□□□□ -1.67
CAST-238	ENST00000512620	C19orf73	Q9NVV2	129 aa		4.64	□□□□□ -1.67
CAST-238	ENST00000512620	ZKSCAN5	Q9Y2L8	839 aa		4.64	□□□□□ -1.67
CAST-238	ENST00000512620	EID1	Q9Y6B2	187 aa		4.64	□□□□□ -1.67
CAST-238	ENST00000512620	TAF6L	Q9Y6J9	622 aa		4.64	□□□□□ -1.67
CAST-238	ENST00000512620	RUSC2	Q8N2Y8	1516 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620		A0A1W2PQ45	241 aa	Predicted RBP	4.63	□□□□□ -1.67
CAST-238	ENST00000512620		A0A1W2PQJ5	194 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620		A0A1W2PQY0	241 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	GPR39	O43194	453 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	BRINP1	O60477	761 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	FKBP9	O95302	570 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	F2	P00734	622 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	LTF	P02788	710 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	AMY2A	P04746	511 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	C8A	P07357	584 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	ATP2A2	P16615	1042 aa	Known RBP	4.63	□□□□□ -1.67
CAST-238	ENST00000512620	JUNB	P17275	347 aa	Predicted RBP	4.63	□□□□□ -1.67
CAST-238	ENST00000512620	AMY2B	P19961	511 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	MECP2	P51608	486 aa	Known RBP	4.63	□□□□□ -1.67
CAST-238	ENST00000512620	GTF2A2	P52657	109 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	DSG1	Q02413	1049 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	ITK	Q08881	620 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	MTMR1	Q13613	665 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	DHCR24	Q15392	516 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	CRY1	Q16526	586 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	CPZ	Q66K79	652 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	BICRAL	Q6AI39	1079 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	ARHGAP36	Q6ZRI8	547 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	FKBP9P1	Q75LS8	142 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	C16orf59	Q7L2K0	433 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	RELT	Q969Z4	430 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	MS4A5	Q9H3V2	200 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	IFT22	Q9H7X7	185 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	SMURF1	Q9HCE7	757 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	VTA1	Q9NP79	307 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	SLC5A4	Q9NY91	659 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	LMCD1	Q9NZU5	365 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	B4GALT6	Q9UBX8	382 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	GPR160	Q9UJ42	338 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	COA3	Q9Y2R0	106 aa	Predicted RBP	4.63	□□□□□ -1.67
CAST-238	ENST00000512620	WASHC2C	Q9Y4E1	1318 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	VPS8	Q8N3P4	1428 aa		4.63	□□□□□ -1.67
CAST-238	ENST00000512620	CCDC194	A0A1B0GVG4	234 aa		4.62	□□□□□ -1.67
CAST-238	ENST00000512620		H7BY64	318 aa		4.62	□□□□□ -1.67
CAST-238	ENST00000512620	SCD	O00767	359 aa		4.62	□□□□□ -1.67
CAST-238	ENST00000512620	SLC27A2	O14975	620 aa		4.62	□□□□□ -1.67
CAST-238	ENST00000512620	ALDH1L1	O75891	902 aa		4.62	□□□□□ -1.67
CAST-238	ENST00000512620	BPI	P17213	487 aa		4.62	□□□□□ -1.67
CAST-238	ENST00000512620	SLC9A1	P19634	815 aa		4.62	□□□□□ -1.67
CAST-238	ENST00000512620	FUT4	P22083	530 aa		4.62	□□□□□ -1.67
CAST-238	ENST00000512620	KIR2DL1	P43626	348 aa	Predicted RBP	4.62	□□□□□ -1.67
CAST-238	ENST00000512620	KIR2DL2	P43627	348 aa	Predicted RBP	4.62	□□□□□ -1.67
CAST-238	ENST00000512620	RNF219	Q5W0B1	726 aa	Predicted RBP	4.62	□□□□□ -1.67
CAST-238	ENST00000512620	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	4.62	□□□□□ -1.67
CAST-238	ENST00000512620	ANKS4B	Q8N8V4	417 aa		4.62	□□□□□ -1.67
CAST-238	ENST00000512620	SMC1B	Q8NDV3	1235 aa		4.62	□□□□□ -1.67
CAST-238	ENST00000512620	SH3RF2	Q8TEC5	729 aa		4.62	□□□□□ -1.67
CAST-238	ENST00000512620	PSMD1	Q99460	953 aa		4.62	□□□□□ -1.67
CAST-238	ENST00000512620	KRTAP17-1	Q9BYP8	105 aa		4.62	□□□□□ -1.67
CAST-238	ENST00000512620	KRTAP4-2	Q9BYR5	136 aa		4.62	□□□□□ -1.67
CAST-238	ENST00000512620	EMC7	Q9NPA0	242 aa		4.62	□□□□□ -1.67
CAST-238	ENST00000512620	MBNL3	Q9NUK0	354 aa	Known RBP	4.62	□□□□□ -1.67
CAST-238	ENST00000512620	THRAP3	Q9Y2W1	955 aa	Known RBP	4.62	□□□□□ -1.67
CAST-238	ENST00000512620	DHX57	Q6P158	1386 aa	Known RBP	4.62	□□□□□ -1.67
CAST-238	ENST00000512620	BAZ1B	Q9UIG0	1483 aa	Known RBP	4.62	□□□□□ -1.67
CAST-238	ENST00000512620	CEP164	Q9UPV0	1460 aa		4.62	□□□□□ -1.67
CAST-238	ENST00000512620	LCHN	A4D1U4	455 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	ZNF561-AS1	K7EIQ3	104 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	MAN2B1	O00754	1011 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	WNT9A	O14904	365 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	GSTA4	O15217	222 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	PRC1	O43663	620 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	NRDC	O43847	1150 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	DGKI	O75912	1065 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	RNASE1	P07998	156 aa	Known RBP	4.61	□□□□□ -1.67
CAST-238	ENST00000512620	ITGB5	P18084	799 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	KPNA1	P52294	538 aa	Predicted RBP	4.61	□□□□□ -1.67
CAST-238	ENST00000512620	CYP4F8	P98187	520 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	TTF1	Q15361	905 aa	Predicted RBP	4.61	□□□□□ -1.67
CAST-238	ENST00000512620	ATP13A4	Q4VNC1	1196 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	CREB3L3	Q68CJ9	461 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	IQSEC1	Q6DN90	963 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	GALNT18	Q6P9A2	607 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	SLC23A3	Q6PIS1	610 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	OTOP3	Q7RTS5	596 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	CNTD1	Q8N815	330 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	PDZD8	Q8NEN9	1154 aa		4.61	□□□□□ -1.67
CAST-238	ENST00000512620	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms