RNA–Protein interactions for RNA: ENST00000512466.1

PDCD6-209, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,763 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-209ENST00000512466 SYF2O95926 243 aaKnown RBP11.71□□□□□ -0.53
PDCD6-209ENST00000512466 SRGNP10124 158 aa11.71□□□□□ -0.53
PDCD6-209ENST00000512466 ACTN1P12814 892 aa11.71□□□□□ -0.53
PDCD6-209ENST00000512466 GJC1P36383 396 aa11.71□□□□□ -0.53
PDCD6-209ENST00000512466 ADCY7P51828 1080 aa11.71□□□□□ -0.53
PDCD6-209ENST00000512466 CLNS1AP54105 237 aaKnown RBP11.71□□□□□ -0.53
PDCD6-209ENST00000512466 EPHB4P54760 987 aa11.71□□□□□ -0.53
PDCD6-209ENST00000512466 ZNF622Q969S3 477 aaKnown RBP eCLIP11.71□□□□□ -0.53
PDCD6-209ENST00000512466 TCEAL9Q9UHQ7 104 aa11.71□□□□□ -0.53
PDCD6-209ENST00000512466 PNPLA7Q6ZV29 1317 aa11.71□□□□□ -0.54
PDCD6-209ENST00000512466 CETN3O15182 167 aa11.71□□□□□ -0.54
PDCD6-209ENST00000512466 BTDP43251 543 aa11.71□□□□□ -0.54
PDCD6-209ENST00000512466 MAN2A1Q16706 1144 aa11.71□□□□□ -0.54
PDCD6-209ENST00000512466 APTXQ7Z2E3 356 aaKnown RBP11.71□□□□□ -0.54
PDCD6-209ENST00000512466 IRF2BP1Q8IU81 584 aa11.71□□□□□ -0.54
PDCD6-209ENST00000512466 CCDC170Q8IYT3 715 aa11.71□□□□□ -0.54
PDCD6-209ENST00000512466 SYCP3Q8IZU3 236 aa11.71□□□□□ -0.54
PDCD6-209ENST00000512466 TBC1D31Q96DN5 1066 aa11.71□□□□□ -0.54
PDCD6-209ENST00000512466 ATP8A2Q9NTI2 1148 aa11.71□□□□□ -0.54
PDCD6-209ENST00000512466 ATP8A1Q9Y2Q0 1164 aa11.71□□□□□ -0.54
PDCD6-209ENST00000512466 FAM237AA0A1B0GTK4 181 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 PSMD14O00487 310 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 MAP2K1Q02750 393 aaPredicted RBP11.7□□□□□ -0.54
PDCD6-209ENST00000512466 TRADDQ15628 312 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 ARL6IP4Q66PJ3 421 aaKnown RBP11.7□□□□□ -0.54
PDCD6-209ENST00000512466 DPP8Q6V1X1 898 aaPredicted RBP11.7□□□□□ -0.54
PDCD6-209ENST00000512466 EFCAB13Q8IY85 973 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 ZIM3Q96PE6 472 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 RIOK1Q9BRS2 568 aaKnown RBP11.7□□□□□ -0.54
PDCD6-209ENST00000512466 FAM53CQ9NYF3 392 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 ARHGAP20Q9P2F6 1191 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 BAIAP2L1Q9UHR4 511 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 MYMKA6NI61 221 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 GOLGA8KD6RF30 607 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 TBCAO75347 108 aaKnown RBP11.7□□□□□ -0.54
PDCD6-209ENST00000512466 NR1D1P20393 614 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 UBXN2AP68543 259 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 SARNPP82979 210 aaKnown RBP11.7□□□□□ -0.54
PDCD6-209ENST00000512466 B4GALNT4Q76KP1 1039 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 CCDC65Q8IXS2 484 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 NOVA2Q9UNW9 492 aaKnown RBP11.7□□□□□ -0.54
PDCD6-209ENST00000512466 PLAAQ9Y263 795 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 USP17L15C9J2P7 530 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 USP17L13C9JLJ4 530 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 USP17L11C9JVI0 530 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 USP17L18D6R9N7 530 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 USP17L22D6RA61 530 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 USP17L17D6RBQ6 530 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 USP17L19D6RCP7 530 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 USP17L20D6RJB6 530 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 GCNT3O95395 438 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 FAM153BP0C7A2 387 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 TMOD1P28289 359 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 COPB2P35606 906 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 VPS41P49754 854 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 USP17L24Q0WX57 530 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 FAM153CQ494X1 144 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 PRR16Q569H4 304 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 MFSD14BQ5SR56 506 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 USP17L6PQ6QN14 398 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 SLC51AQ86UW1 340 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 TSEN2Q8NCE0 465 aaKnown RBP11.7□□□□□ -0.54
PDCD6-209ENST00000512466 BRIP1Q9BX63 1249 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 PACSIN1Q9BY11 444 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 CHORDC1Q9UHD1 332 aaPredicted RBP11.7□□□□□ -0.54
PDCD6-209ENST00000512466 FAM153AQ9UHL3 310 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 GGT7Q9UJ14 662 aa11.7□□□□□ -0.54
PDCD6-209ENST00000512466 NR2F2P24468 414 aa11.69□□□□□ -0.54
PDCD6-209ENST00000512466 STAT3P40763 770 aa11.69□□□□□ -0.54
PDCD6-209ENST00000512466 FAM83BQ5T0W9 1011 aa11.69□□□□□ -0.54
PDCD6-209ENST00000512466 TTI2Q6NXR4 508 aa11.69□□□□□ -0.54
PDCD6-209ENST00000512466 SH3RF1Q7Z6J0 888 aa11.69□□□□□ -0.54
PDCD6-209ENST00000512466 N4BP2L2Q92802 583 aaPredicted RBP11.69□□□□□ -0.54
PDCD6-209ENST00000512466 DNAJC17Q9NVM6 304 aaKnown RBP11.69□□□□□ -0.54
PDCD6-209ENST00000512466 ITIH6Q6UXX5 1313 aa11.69□□□□□ -0.54
PDCD6-209ENST00000512466 GSTTP1A0A1W2PQM5 241 aa11.69□□□□□ -0.54
PDCD6-209ENST00000512466 DDX39AO00148 427 aaKnown RBP11.69□□□□□ -0.54
PDCD6-209ENST00000512466 LRRN2O75325 713 aa11.69□□□□□ -0.54
PDCD6-209ENST00000512466 MMP10P09238 476 aa11.69□□□□□ -0.54
PDCD6-209ENST00000512466 GTF2IP78347 998 aa11.69□□□□□ -0.54
PDCD6-209ENST00000512466 PRPF38AQ8NAV1 312 aaKnown RBP11.69□□□□□ -0.54
PDCD6-209ENST00000512466 GIMAP8Q8ND71 665 aaPredicted RBP11.69□□□□□ -0.54
PDCD6-209ENST00000512466 DDX25Q9UHL0 483 aaKnown RBP11.69□□□□□ -0.54
PDCD6-209ENST00000512466 EIF4E1BA6NMX2 242 aaKnown RBP11.69□□□□□ -0.54
PDCD6-209ENST00000512466 PRPF6O94906 941 aaKnown RBP11.69□□□□□ -0.54
PDCD6-209ENST00000512466 SLURP2P0DP57 97 aa11.69□□□□□ -0.54
PDCD6-209ENST00000512466 KLRC1P26715 233 aa11.69□□□□□ -0.54
PDCD6-209ENST00000512466 ZYXQ15942 572 aaKnown RBP11.69□□□□□ -0.54
PDCD6-209ENST00000512466 MTMR8Q96EF0 704 aa11.69□□□□□ -0.54
PDCD6-209ENST00000512466 CEP95Q96GE4 821 aa11.69□□□□□ -0.54
PDCD6-209ENST00000512466 KCNK9Q9NPC2 374 aa11.69□□□□□ -0.54
PDCD6-209ENST00000512466 DOT1LQ8TEK3 1739 aa11.69□□□□□ -0.54
PDCD6-209ENST00000512466 RIC1Q4ADV7 1423 aa11.68□□□□□ -0.54
PDCD6-209ENST00000512466 GLI1P08151 1106 aa11.68□□□□□ -0.54
PDCD6-209ENST00000512466 CYP2J2P51589 502 aa11.68□□□□□ -0.54
PDCD6-209ENST00000512466 ZNF211Q13398 564 aaPredicted RBP11.68□□□□□ -0.54
PDCD6-209ENST00000512466 BIRC2Q13490 618 aa11.68□□□□□ -0.54
PDCD6-209ENST00000512466 SLC30A10Q6XR72 485 aa11.68□□□□□ -0.54
PDCD6-209ENST00000512466 KIRREL3Q8IZU9 778 aa11.68□□□□□ -0.54
PDCD6-209ENST00000512466 DUSP9Q99956 384 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms