RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 VWCEQ96DN2 955 aa18.88■□□□□ 0.61
DDX41-213ENST00000512027 GPR20Q99678 358 aa18.88■□□□□ 0.61
DDX41-213ENST00000512027 C16orf70Q9BSU1 422 aa18.88■□□□□ 0.61
DDX41-213ENST00000512027 NOD1Q9Y239 953 aa18.88■□□□□ 0.61
DDX41-213ENST00000512027 GBF1Q92538 1859 aa18.88■□□□□ 0.61
DDX41-213ENST00000512027 NOP56O00567 594 aaKnown RBP18.87■□□□□ 0.61
DDX41-213ENST00000512027 PPFIA4O75335 1185 aa18.87■□□□□ 0.61
DDX41-213ENST00000512027 KCNA2P16389 499 aa18.87■□□□□ 0.61
DDX41-213ENST00000512027 MTMR1Q13613 665 aa18.87■□□□□ 0.61
DDX41-213ENST00000512027 FAM109BQ6ICB4 259 aaPredicted RBP18.87■□□□□ 0.61
DDX41-213ENST00000512027 C7orf31Q8N865 590 aa18.87■□□□□ 0.61
DDX41-213ENST00000512027 RASGRP4Q8TDF6 673 aa18.87■□□□□ 0.61
DDX41-213ENST00000512027 DHX38Q92620 1227 aaKnown RBP18.87■□□□□ 0.61
DDX41-213ENST00000512027 RNF26Q9BY78 433 aaPredicted RBP18.87■□□□□ 0.61
DDX41-213ENST00000512027 IL23AQ9NPF7 189 aa18.87■□□□□ 0.61
DDX41-213ENST00000512027 VPS54Q9P1Q0 977 aa18.87■□□□□ 0.61
DDX41-213ENST00000512027 GTF2IRD1Q9UHL9 959 aa18.87■□□□□ 0.61
DDX41-213ENST00000512027 AKAP17AQ02040 695 aaKnown RBP18.86■□□□□ 0.61
DDX41-213ENST00000512027 UTP14CQ5TAP6 766 aaKnown RBP18.86■□□□□ 0.61
DDX41-213ENST00000512027 SESTD1Q86VW0 696 aa18.86■□□□□ 0.61
DDX41-213ENST00000512027 DEFB123Q8N688 67 aa18.86■□□□□ 0.61
DDX41-213ENST00000512027 WNT8BQ93098 351 aa18.86■□□□□ 0.61
DDX41-213ENST00000512027 KATNAL1Q9BW62 490 aa18.86■□□□□ 0.61
DDX41-213ENST00000512027 EHMT1Q9H9B1 1298 aa18.86■□□□□ 0.61
DDX41-213ENST00000512027 TET1Q8NFU7 2136 aa18.85■□□□□ 0.61
DDX41-213ENST00000512027 ARP10275 920 aa18.85■□□□□ 0.61
DDX41-213ENST00000512027 AP3B2Q13367 1082 aa18.85■□□□□ 0.61
DDX41-213ENST00000512027 DEFB128Q7Z7B8 93 aa18.85■□□□□ 0.61
DDX41-213ENST00000512027 ZNF274Q96GC6 653 aaPredicted RBP18.85■□□□□ 0.61
DDX41-213ENST00000512027 FAM161BQ96MY7 647 aa18.85■□□□□ 0.61
DDX41-213ENST00000512027 UIMC1Q96RL1 719 aa18.85■□□□□ 0.61
DDX41-213ENST00000512027 SENP7Q9BQF6 1050 aa18.85■□□□□ 0.61
DDX41-213ENST00000512027 MXRA8Q9BRK3 442 aa18.85■□□□□ 0.61
DDX41-213ENST00000512027 ZMYND12Q9H0C1 365 aa18.85■□□□□ 0.61
DDX41-213ENST00000512027 JADE2Q9NQC1 790 aa18.85■□□□□ 0.61
DDX41-213ENST00000512027 CXXC1Q9P0U4 656 aaPredicted RBP18.85■□□□□ 0.61
DDX41-213ENST00000512027 ESYT2A0FGR8 921 aa18.84■□□□□ 0.61
DDX41-213ENST00000512027 GRXCR1A8MXD5 290 aa18.84■□□□□ 0.61
DDX41-213ENST00000512027 H3BRB1 525 aa18.84■□□□□ 0.61
DDX41-213ENST00000512027 FOSP01100 380 aaPredicted RBP18.84■□□□□ 0.61
DDX41-213ENST00000512027 SREBF1P36956 1147 aa18.84■□□□□ 0.61
DDX41-213ENST00000512027 AK2P54819 239 aa18.84■□□□□ 0.61
DDX41-213ENST00000512027 ARHGAP4P98171 946 aa18.84■□□□□ 0.61
DDX41-213ENST00000512027 PSRC1Q6PGN9 363 aaPredicted RBP18.84■□□□□ 0.61
DDX41-213ENST00000512027 OTOP2Q7RTS6 562 aa18.84■□□□□ 0.61
DDX41-213ENST00000512027 AIFM3Q96NN9 605 aa18.84■□□□□ 0.61
DDX41-213ENST00000512027 TUT1Q9H6E5 874 aaKnown RBP18.84■□□□□ 0.61
DDX41-213ENST00000512027 C6orf50Q9HD87 102 aa18.84■□□□□ 0.61
DDX41-213ENST00000512027 KCNH7Q9NS40 1196 aa18.84■□□□□ 0.61
DDX41-213ENST00000512027 TPCN1Q9ULQ1 816 aa18.84■□□□□ 0.61
DDX41-213ENST00000512027 CPLX1O14810 134 aa18.83■□□□□ 0.6
DDX41-213ENST00000512027 TCF7P36402 384 aaPredicted RBP18.83■□□□□ 0.6
DDX41-213ENST00000512027 ANAPC15P60006 121 aa18.83■□□□□ 0.6
DDX41-213ENST00000512027 SSRP1Q08945 709 aaKnown RBP18.83■□□□□ 0.6
DDX41-213ENST00000512027 SCRN1Q12765 414 aa18.83■□□□□ 0.6
DDX41-213ENST00000512027 REXO1Q8N1G1 1221 aaKnown RBP18.83■□□□□ 0.6
DDX41-213ENST00000512027 CDHR1Q96JP9 859 aa18.83■□□□□ 0.6
DDX41-213ENST00000512027 GSTTP1A0A1W2PQM5 241 aa18.82■□□□□ 0.6
DDX41-213ENST00000512027 FAM86B1E9PN63 330 aa18.82■□□□□ 0.6
DDX41-213ENST00000512027 LARGE1O95461 756 aa18.82■□□□□ 0.6
DDX41-213ENST00000512027 FGBP02675 491 aa18.82■□□□□ 0.6
DDX41-213ENST00000512027 FAM86B2P0C5J1 330 aa18.82■□□□□ 0.6
DDX41-213ENST00000512027 IQCF3P0C7M6 154 aa18.82■□□□□ 0.6
DDX41-213ENST00000512027 SMIM10L2AP0DMW4 78 aa18.82■□□□□ 0.6
DDX41-213ENST00000512027 SMIM10L2BP0DMW5 78 aa18.82■□□□□ 0.6
DDX41-213ENST00000512027 ITGB3BPQ13352 177 aaPredicted RBP18.82■□□□□ 0.6
DDX41-213ENST00000512027 CEP55Q53EZ4 464 aa18.82■□□□□ 0.6
DDX41-213ENST00000512027 RASIP1Q5U651 963 aa18.82■□□□□ 0.6
DDX41-213ENST00000512027 GPR153Q6NV75 609 aa18.82■□□□□ 0.6
DDX41-213ENST00000512027 CCDC12Q8WUD4 166 aaPredicted RBP18.82■□□□□ 0.6
DDX41-213ENST00000512027 GLT8D2Q9H1C3 349 aa18.82■□□□□ 0.6
DDX41-213ENST00000512027 CHD9Q3L8U1 2897 aa18.82■□□□□ 0.6
DDX41-213ENST00000512027 PTPRSQ13332 1948 aa18.81■□□□□ 0.6
DDX41-213ENST00000512027 PITPNM1O00562 1244 aa18.81■□□□□ 0.6
DDX41-213ENST00000512027 ZNF76P36508 570 aa18.81■□□□□ 0.6
DDX41-213ENST00000512027 SMAD3P84022 425 aaKnown RBP18.81■□□□□ 0.6
DDX41-213ENST00000512027 BFSP2Q13515 415 aa18.81■□□□□ 0.6
DDX41-213ENST00000512027 TRIM71Q2Q1W2 868 aaKnown RBP18.81■□□□□ 0.6
DDX41-213ENST00000512027 C8orf34Q49A92 452 aa18.81■□□□□ 0.6
DDX41-213ENST00000512027 TRIM22Q8IYM9 498 aa18.81■□□□□ 0.6
DDX41-213ENST00000512027 RETREG2Q8NC44 543 aa18.81■□□□□ 0.6
DDX41-213ENST00000512027 GIMAP8Q8ND71 665 aaPredicted RBP18.81■□□□□ 0.6
DDX41-213ENST00000512027 CCDC148Q8NFR7 591 aa18.81■□□□□ 0.6
DDX41-213ENST00000512027 CRYGNQ8WXF5 182 aa18.81■□□□□ 0.6
DDX41-213ENST00000512027 HERVK_113Q902F9 699 aa18.81■□□□□ 0.6
DDX41-213ENST00000512027 KAT6AQ92794 2004 aa18.81■□□□□ 0.6
DDX41-213ENST00000512027 CDH23Q9H251 3354 aa18.8■□□□□ 0.6
DDX41-213ENST00000512027 C17orf102A2RUQ5 167 aa18.8■□□□□ 0.6
DDX41-213ENST00000512027 ZBBXA8MT70 800 aa18.8■□□□□ 0.6
DDX41-213ENST00000512027 DDX39AO00148 427 aaKnown RBP18.8■□□□□ 0.6
DDX41-213ENST00000512027 MEIS1O00470 390 aa18.8■□□□□ 0.6
DDX41-213ENST00000512027 MARK3P27448 753 aa18.8■□□□□ 0.6
DDX41-213ENST00000512027 GNA11P29992 359 aa18.8■□□□□ 0.6
DDX41-213ENST00000512027 NLRP5P59047 1200 aa18.8■□□□□ 0.6
DDX41-213ENST00000512027 TEX2Q8IWB9 1127 aa18.8■□□□□ 0.6
DDX41-213ENST00000512027 SLKQ9H2G2 1235 aaPredicted RBP18.8■□□□□ 0.6
DDX41-213ENST00000512027 RNPEPQ9H4A4 650 aa18.8■□□□□ 0.6
DDX41-213ENST00000512027 AGO4Q9HCK5 861 aaKnown RBP18.8■□□□□ 0.6
DDX41-213ENST00000512027 JPH1Q9HDC5 661 aaPredicted RBP18.8■□□□□ 0.6
DDX41-213ENST00000512027 SETD4Q9NVD3 440 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms