RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 TUT1Q9H6E5 874 aaKnown RBP17.62■□□□□ 0.41
COL1A1-213ENST00000511732 CNTNAP5Q8WYK1 1306 aa17.62■□□□□ 0.41
COL1A1-213ENST00000511732 ATP9AO75110 1047 aa17.61■□□□□ 0.41
COL1A1-213ENST00000511732 ARHGEF15O94989 841 aa17.61■□□□□ 0.41
COL1A1-213ENST00000511732 CXCL10P02778 98 aa17.61■□□□□ 0.41
COL1A1-213ENST00000511732 CA3P07451 260 aa17.61■□□□□ 0.41
COL1A1-213ENST00000511732 HOXC8P31273 242 aa17.61■□□□□ 0.41
COL1A1-213ENST00000511732 FUT2Q10981 343 aa17.61■□□□□ 0.41
COL1A1-213ENST00000511732 MBTPS1Q14703 1052 aa17.61■□□□□ 0.41
COL1A1-213ENST00000511732 TYW1BQ6NUM6 668 aa17.61■□□□□ 0.41
COL1A1-213ENST00000511732 DHX32Q7L7V1 743 aaKnown RBP17.61■□□□□ 0.41
COL1A1-213ENST00000511732 PHOSPHO2Q8TCD6 241 aa17.61■□□□□ 0.41
COL1A1-213ENST00000511732 RNPEPQ9H4A4 650 aa17.61■□□□□ 0.41
COL1A1-213ENST00000511732 PRDM6Q9NQX0 595 aa17.61■□□□□ 0.41
COL1A1-213ENST00000511732 PRUNE2Q8WUY3 3088 aa17.61■□□□□ 0.41
COL1A1-213ENST00000511732 CHD9Q3L8U1 2897 aa17.6■□□□□ 0.41
COL1A1-213ENST00000511732 NOP56O00567 594 aaKnown RBP17.6■□□□□ 0.41
COL1A1-213ENST00000511732 BAIAP3O94812 1187 aa17.6■□□□□ 0.41
COL1A1-213ENST00000511732 SMIM10L2AP0DMW4 78 aa17.6■□□□□ 0.41
COL1A1-213ENST00000511732 SMIM10L2BP0DMW5 78 aa17.6■□□□□ 0.41
COL1A1-213ENST00000511732 WWC2Q6AWC2 1192 aa17.6■□□□□ 0.41
COL1A1-213ENST00000511732 XRRA1Q6P2D8 792 aa17.6■□□□□ 0.41
COL1A1-213ENST00000511732 HEATR3Q7Z4Q2 680 aa17.6■□□□□ 0.41
COL1A1-213ENST00000511732 TMCO2Q7Z6W1 182 aaPredicted RBP17.6■□□□□ 0.41
COL1A1-213ENST00000511732 TRIM50Q86XT4 487 aa17.6■□□□□ 0.41
COL1A1-213ENST00000511732 HERC6Q8IVU3 1022 aa17.6■□□□□ 0.41
COL1A1-213ENST00000511732 PPM1EQ8WY54 764 aa17.6■□□□□ 0.41
COL1A1-213ENST00000511732 SENP7Q9BQF6 1050 aa17.6■□□□□ 0.41
COL1A1-213ENST00000511732 FAM217BQ9NTX9 383 aaPredicted RBP17.6■□□□□ 0.41
COL1A1-213ENST00000511732 MYO9BQ13459 2157 aa17.59■□□□□ 0.41
COL1A1-213ENST00000511732 C17orf102A2RUQ5 167 aa17.59■□□□□ 0.41
COL1A1-213ENST00000511732 TREHO43280 583 aa17.59■□□□□ 0.41
COL1A1-213ENST00000511732 CPA1P15085 419 aa17.59■□□□□ 0.41
COL1A1-213ENST00000511732 KCNA2P16389 499 aa17.59■□□□□ 0.41
COL1A1-213ENST00000511732 ITGB5P18084 799 aa17.59■□□□□ 0.41
COL1A1-213ENST00000511732 WDR5P61964 334 aaKnown RBP17.59■□□□□ 0.41
COL1A1-213ENST00000511732 DEFB103AP81534 67 aa17.59■□□□□ 0.41
COL1A1-213ENST00000511732 SP4Q02446 784 aa17.59■□□□□ 0.41
COL1A1-213ENST00000511732 CNKSR3Q6P9H4 555 aa17.59■□□□□ 0.41
COL1A1-213ENST00000511732 SYNE3Q6ZMZ3 975 aa17.59■□□□□ 0.41
COL1A1-213ENST00000511732 NLRX1Q86UT6 975 aa17.59■□□□□ 0.41
COL1A1-213ENST00000511732 SERINC5Q86VE9 423 aa17.59■□□□□ 0.41
COL1A1-213ENST00000511732 USP26Q9BXU7 913 aa17.59■□□□□ 0.41
COL1A1-213ENST00000511732 CERS4Q9HA82 394 aa17.59■□□□□ 0.41
COL1A1-213ENST00000511732 RBM28Q9NW13 759 aaKnown RBP17.59■□□□□ 0.41
COL1A1-213ENST00000511732 PCDHA6Q9UN73 950 aa17.59■□□□□ 0.41
COL1A1-213ENST00000511732 PCDHA8Q9Y5H6 950 aa17.59■□□□□ 0.41
COL1A1-213ENST00000511732 VCANP13611 3396 aa17.59■□□□□ 0.41
COL1A1-213ENST00000511732 RFXAPO00287 272 aa17.58■□□□□ 0.4
COL1A1-213ENST00000511732 ZBTB43O43298 467 aa17.58■□□□□ 0.4
COL1A1-213ENST00000511732 PARNO95453 639 aaKnown RBP17.58■□□□□ 0.4
COL1A1-213ENST00000511732 IGFBP4P22692 258 aa17.58■□□□□ 0.4
COL1A1-213ENST00000511732 CDC27P30260 824 aa17.58■□□□□ 0.4
COL1A1-213ENST00000511732 RTN1Q16799 776 aa17.58■□□□□ 0.4
COL1A1-213ENST00000511732 UTP14CQ5TAP6 766 aaKnown RBP17.58■□□□□ 0.4
COL1A1-213ENST00000511732 KCNB2Q92953 911 aa17.58■□□□□ 0.4
COL1A1-213ENST00000511732 ATP6V0A1Q93050 837 aa17.58■□□□□ 0.4
COL1A1-213ENST00000511732 GPRASP2Q96D09 838 aa17.58■□□□□ 0.4
COL1A1-213ENST00000511732 OSBPL7Q9BZF2 842 aa17.58■□□□□ 0.4
COL1A1-213ENST00000511732 SETD4Q9NVD3 440 aa17.58■□□□□ 0.4
COL1A1-213ENST00000511732 UBIAD1Q9Y5Z9 338 aa17.58■□□□□ 0.4
COL1A1-213ENST00000511732 KLF18A0A0U1RQI7 1052 aa17.57■□□□□ 0.4
COL1A1-213ENST00000511732 EPOPA6NHQ4 379 aa17.57■□□□□ 0.4
COL1A1-213ENST00000511732 SPDYE3A6NKU9 549 aa17.57■□□□□ 0.4
COL1A1-213ENST00000511732 THPOP40225 353 aa17.57■□□□□ 0.4
COL1A1-213ENST00000511732 TAP1Q03518 808 aa17.57■□□□□ 0.4
COL1A1-213ENST00000511732 KRT32Q14532 448 aa17.57■□□□□ 0.4
COL1A1-213ENST00000511732 CCDC85BQ15834 202 aaPredicted RBP17.57■□□□□ 0.4
COL1A1-213ENST00000511732 SPRED2Q7Z698 418 aa17.57■□□□□ 0.4
COL1A1-213ENST00000511732 CCDC136Q96JN2 1154 aa17.57■□□□□ 0.4
COL1A1-213ENST00000511732 PKD2L1Q9P0L9 805 aa17.57■□□□□ 0.4
COL1A1-213ENST00000511732 V9GY48 417 aaPredicted RBP17.57■□□□□ 0.4
COL1A1-213ENST00000511732 CHD7Q9P2D1 2997 aa17.56■□□□□ 0.4
COL1A1-213ENST00000511732 GSTTP1A0A1W2PQM5 241 aa17.56■□□□□ 0.4
COL1A1-213ENST00000511732 LCHNA4D1U4 455 aa17.56■□□□□ 0.4
COL1A1-213ENST00000511732 GOLGA8AA7E2F4 631 aa17.56■□□□□ 0.4
COL1A1-213ENST00000511732 GOLGA8BA8MQT2 603 aa17.56■□□□□ 0.4
COL1A1-213ENST00000511732 KCNJ6P48051 423 aa17.56■□□□□ 0.4
COL1A1-213ENST00000511732 ADAM17P78536 824 aa17.56■□□□□ 0.4
COL1A1-213ENST00000511732 PGBD1Q96JS3 809 aa17.56■□□□□ 0.4
COL1A1-213ENST00000511732 JADE2Q9NQC1 790 aa17.56■□□□□ 0.4
COL1A1-213ENST00000511732 ABHD14A-ACY1A0A1B0GW23 586 aa17.55■□□□□ 0.4
COL1A1-213ENST00000511732 RSPH10B2B2RC85 870 aa17.55■□□□□ 0.4
COL1A1-213ENST00000511732 STXBP3O00186 592 aa17.55■□□□□ 0.4
COL1A1-213ENST00000511732 LGR5O75473 907 aa17.55■□□□□ 0.4
COL1A1-213ENST00000511732 RSPH10BP0C881 870 aa17.55■□□□□ 0.4
COL1A1-213ENST00000511732 HSPA4P34932 840 aa17.55■□□□□ 0.4
COL1A1-213ENST00000511732 TCF7P36402 384 aaPredicted RBP17.55■□□□□ 0.4
COL1A1-213ENST00000511732 NAPAP54920 295 aa17.55■□□□□ 0.4
COL1A1-213ENST00000511732 MKRN4PQ13434 485 aaPredicted RBP17.55■□□□□ 0.4
COL1A1-213ENST00000511732 MTMR1Q13613 665 aa17.55■□□□□ 0.4
COL1A1-213ENST00000511732 GIMAP8Q8ND71 665 aaPredicted RBP17.55■□□□□ 0.4
COL1A1-213ENST00000511732 DBF4BQ8NFT6 615 aa17.55■□□□□ 0.4
COL1A1-213ENST00000511732 CYP2W1Q8TAV3 490 aa17.55■□□□□ 0.4
COL1A1-213ENST00000511732 RIC8AQ9NPQ8 531 aa17.55■□□□□ 0.4
COL1A1-213ENST00000511732 SNX14Q9Y5W7 946 aa17.55■□□□□ 0.4
COL1A1-213ENST00000511732 MICAL3Q7RTP6 2002 aa17.55■□□□□ 0.4
COL1A1-213ENST00000511732 KIF28PB7ZC32 967 aa17.54■□□□□ 0.4
COL1A1-213ENST00000511732 TLL1O43897 1013 aa17.54■□□□□ 0.4
COL1A1-213ENST00000511732 ADD1P35611 737 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms