RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 PSTPIP2Q9H939 334 aa5.37□□□□□ -1.55
PTPN13-209ENST00000511467 SERPINA10Q9UK55 444 aa5.37□□□□□ -1.55
PTPN13-209ENST00000511467 NSFL1CQ9UNZ2 370 aaKnown RBP5.37□□□□□ -1.55
PTPN13-209ENST00000511467 TAF1LQ8IZX4 1826 aa5.37□□□□□ -1.55
PTPN13-209ENST00000511467 GOLGA8KD6RF30 607 aa5.37□□□□□ -1.55
PTPN13-209ENST00000511467 SKILP12757 684 aa5.37□□□□□ -1.55
PTPN13-209ENST00000511467 TBC1D8BQ0IIM8 1120 aa5.37□□□□□ -1.55
PTPN13-209ENST00000511467 SREBF2Q12772 1141 aa5.37□□□□□ -1.55
PTPN13-209ENST00000511467 RBBP5Q15291 538 aaKnown RBP5.37□□□□□ -1.55
PTPN13-209ENST00000511467 FBXO11Q86XK2 927 aa5.37□□□□□ -1.55
PTPN13-209ENST00000511467 TMCO5AQ8N6Q1 288 aa5.37□□□□□ -1.55
PTPN13-209ENST00000511467 NRBF2Q96F24 287 aa5.37□□□□□ -1.55
PTPN13-209ENST00000511467 TRIM15Q9C019 465 aa5.37□□□□□ -1.55
PTPN13-209ENST00000511467 MRPL44Q9H9J2 332 aaKnown RBP5.37□□□□□ -1.55
PTPN13-209ENST00000511467 TUFT1Q9NNX1 390 aa5.37□□□□□ -1.55
PTPN13-209ENST00000511467 TNRC6CQ9HCJ0 1690 aaKnown RBP5.37□□□□□ -1.55
PTPN13-209ENST00000511467 MAP1BP46821 2468 aaKnown RBP5.36□□□□□ -1.55
PTPN13-209ENST00000511467 CRYBG1Q9Y4K1 1723 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 GRID2IPA4D2P6 1211 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 HOXA2O43364 376 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 SLC25A27O95847 323 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 DNAJB2P25686 324 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 MFAP3P55082 362 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 GNG11P61952 73 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 CREMQ03060 361 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 GRAPQ13588 217 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 NBPF9Q3BBW0 867 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 TMC6Q7Z403 805 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 GRAPLQ8TC17 118 aaPredicted RBP5.36□□□□□ -1.55
PTPN13-209ENST00000511467 NOC4LQ9BVI4 516 aaKnown RBP5.36□□□□□ -1.55
PTPN13-209ENST00000511467 AATFQ9NY61 560 aaKnown RBP eCLIP5.36□□□□□ -1.55
PTPN13-209ENST00000511467 COL1A1P02452 1464 aaPredicted RBP5.36□□□□□ -1.55
PTPN13-209ENST00000511467 A0A1B0GUL6 1792 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 UQCRHLA0A096LP55 91 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 TMCC1O94876 653 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 ZWINTO95229 277 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 PSAPP07602 524 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 UQCRHP07919 91 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 MAPK9P45984 424 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 SLC12A2P55011 1212 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 KCNB1Q14721 858 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 TEDDM1Q5T9Z0 273 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 SPATA1Q5VX52 437 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 METTL3Q86U44 580 aaKnown RBP5.36□□□□□ -1.55
PTPN13-209ENST00000511467 FAM178BQ8IXR5 827 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 SP8Q8IXZ3 490 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 SBF1O95248 1867 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 ANKRD36A6QL64 1941 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 ESYT2A0FGR8 921 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 FRMD3A2A2Y4 597 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 DAPK3O43293 454 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 ALDH1A1P00352 501 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 TNFAIP3P21580 790 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 HADHAP40939 763 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 TBCCQ15814 346 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 DALRD3Q5D0E6 543 aaKnown RBP5.36□□□□□ -1.55
PTPN13-209ENST00000511467 ARHGEF16Q5VV41 709 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 GSTA5Q7RTV2 222 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 ZNF654Q8IZM8 581 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 CSGALNACT2Q8N6G5 542 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 SMCR8Q8TEV9 937 aaPredicted RBP5.36□□□□□ -1.55
PTPN13-209ENST00000511467 IFT81Q8WYA0 676 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 NAT9Q9BTE0 207 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 IL1RAPL2Q9NP60 686 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 UTYO14607 1347 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 FMNL1O95466 1100 aaPredicted RBP5.36□□□□□ -1.55
PTPN13-209ENST00000511467 KRT9P35527 623 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 SCNN1DP51172 638 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 AMPD2Q01433 879 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 BIRC3Q13489 604 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 ABCB5Q2M3G0 1257 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 NAALADL2Q58DX5 795 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 RAB42Q8N4Z0 105 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 BRF1Q92994 677 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 ALKBH8Q96BT7 664 aaKnown RBP5.36□□□□□ -1.55
PTPN13-209ENST00000511467 OSBPL5Q9H0X9 879 aaPredicted RBP5.36□□□□□ -1.55
PTPN13-209ENST00000511467 EVA1BQ9NVM1 165 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 DOT1LQ8TEK3 1739 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 ZBTB22O15209 634 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 RPS6KA4O75676 772 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 KRT3P12035 628 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 GTF2H1P32780 548 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 MKRN3Q13064 507 aaKnown RBP5.36□□□□□ -1.55
PTPN13-209ENST00000511467 KCTD2Q14681 263 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 NAA25Q14CX7 972 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 BEND3Q5T5X7 828 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 OLFML2BQ68BL8 750 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 SGMS1Q86VZ5 419 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 RIBC1Q8N443 379 aaPredicted RBP5.36□□□□□ -1.55
PTPN13-209ENST00000511467 DEPTORQ8TB45 409 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 STMN2Q93045 179 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 CAPZA3Q96KX2 299 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 MAGEB10Q96LZ2 347 aaPredicted RBP5.36□□□□□ -1.55
PTPN13-209ENST00000511467 MEIS3Q99687 375 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 KIFC3Q9BVG8 833 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 NCOR1O75376 2440 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 ASB14A6NK59 587 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 TLR3O15455 904 aaKnown RBP5.36□□□□□ -1.55
PTPN13-209ENST00000511467 KRT7P08729 469 aa5.36□□□□□ -1.55
PTPN13-209ENST00000511467 PSMA3P25788 255 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms