RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 CYP2W1Q8TAV3 490 aa13.29□□□□□ -0.28
SH3RF1-205ENST00000511421 CDHR1Q96JP9 859 aa13.29□□□□□ -0.28
SH3RF1-205ENST00000511421 ALG1Q9BT22 464 aa13.29□□□□□ -0.28
SH3RF1-205ENST00000511421 IL23AQ9NPF7 189 aa13.29□□□□□ -0.28
SH3RF1-205ENST00000511421 MAFGO15525 162 aa13.28□□□□□ -0.28
SH3RF1-205ENST00000511421 LGALS2P05162 132 aa13.28□□□□□ -0.28
SH3RF1-205ENST00000511421 ACRP10323 421 aa13.28□□□□□ -0.28
SH3RF1-205ENST00000511421 SREBF1P36956 1147 aa13.28□□□□□ -0.28
SH3RF1-205ENST00000511421 MTMR1Q13613 665 aa13.28□□□□□ -0.28
SH3RF1-205ENST00000511421 PTGISQ16647 500 aa13.28□□□□□ -0.28
SH3RF1-205ENST00000511421 JAKMIP3Q5VZ66 844 aa13.28□□□□□ -0.28
SH3RF1-205ENST00000511421 GIMAP8Q8ND71 665 aaPredicted RBP13.28□□□□□ -0.28
SH3RF1-205ENST00000511421 CCDC12Q8WUD4 166 aaPredicted RBP13.28□□□□□ -0.28
SH3RF1-205ENST00000511421 CRYGNQ8WXF5 182 aa13.28□□□□□ -0.28
SH3RF1-205ENST00000511421 RNPC3Q96LT9 517 aaKnown RBP13.28□□□□□ -0.28
SH3RF1-205ENST00000511421 MXRA8Q9BRK3 442 aa13.28□□□□□ -0.28
SH3RF1-205ENST00000511421 NOP56O00567 594 aaKnown RBP13.28□□□□□ -0.28
SH3RF1-205ENST00000511421 EIF5BO60841 1220 aaKnown RBP13.28□□□□□ -0.28
SH3RF1-205ENST00000511421 STK3Q13188 491 aa13.28□□□□□ -0.28
SH3RF1-205ENST00000511421 HIC1Q14526 733 aa13.28□□□□□ -0.28
SH3RF1-205ENST00000511421 RASIP1Q5U651 963 aa13.28□□□□□ -0.28
SH3RF1-205ENST00000511421 ZNF365Q70YC5 407 aa13.28□□□□□ -0.28
SH3RF1-205ENST00000511421 C7orf31Q8N865 590 aa13.28□□□□□ -0.28
SH3RF1-205ENST00000511421 DHX38Q92620 1227 aaKnown RBP13.28□□□□□ -0.28
SH3RF1-205ENST00000511421 SCLYQ96I15 445 aa13.28□□□□□ -0.28
SH3RF1-205ENST00000511421 C6orf50Q9HD87 102 aa13.28□□□□□ -0.28
SH3RF1-205ENST00000511421 KCNH7Q9NS40 1196 aa13.28□□□□□ -0.28
SH3RF1-205ENST00000511421 TPCN1Q9ULQ1 816 aa13.28□□□□□ -0.28
SH3RF1-205ENST00000511421 LAMA2P24043 3122 aaKnown RBP13.27□□□□□ -0.28
SH3RF1-205ENST00000511421 H3BRB1 525 aa13.27□□□□□ -0.29
SH3RF1-205ENST00000511421 PITPNM1O00562 1244 aa13.27□□□□□ -0.29
SH3RF1-205ENST00000511421 GNA11P29992 359 aa13.27□□□□□ -0.29
SH3RF1-205ENST00000511421 ARHGAP4P98171 946 aa13.27□□□□□ -0.29
SH3RF1-205ENST00000511421 SSRP1Q08945 709 aaKnown RBP13.27□□□□□ -0.29
SH3RF1-205ENST00000511421 SCRN1Q12765 414 aa13.27□□□□□ -0.29
SH3RF1-205ENST00000511421 CEP55Q53EZ4 464 aa13.27□□□□□ -0.29
SH3RF1-205ENST00000511421 PSRC1Q6PGN9 363 aaPredicted RBP13.27□□□□□ -0.29
SH3RF1-205ENST00000511421 TUT1Q9H6E5 874 aaKnown RBP13.27□□□□□ -0.29
SH3RF1-205ENST00000511421 SH3GLB2Q9NR46 395 aa13.27□□□□□ -0.29
SH3RF1-205ENST00000511421 VPS54Q9P1Q0 977 aa13.27□□□□□ -0.29
SH3RF1-205ENST00000511421 NOD1Q9Y239 953 aa13.27□□□□□ -0.29
SH3RF1-205ENST00000511421 GSTTP1A0A1W2PQM5 241 aa13.26□□□□□ -0.29
SH3RF1-205ENST00000511421 MEIS1O00470 390 aa13.26□□□□□ -0.29
SH3RF1-205ENST00000511421 CPLX1O14810 134 aa13.26□□□□□ -0.29
SH3RF1-205ENST00000511421 PFKFB2O60825 505 aa13.26□□□□□ -0.29
SH3RF1-205ENST00000511421 CYP3A4P08684 503 aa13.26□□□□□ -0.29
SH3RF1-205ENST00000511421 ARP10275 920 aa13.26□□□□□ -0.29
SH3RF1-205ENST00000511421 HOXC8P31273 242 aa13.26□□□□□ -0.29
SH3RF1-205ENST00000511421 AK2P54819 239 aa13.26□□□□□ -0.29
SH3RF1-205ENST00000511421 SMAD3P84022 425 aaKnown RBP13.26□□□□□ -0.29
SH3RF1-205ENST00000511421 ZNF200P98182 395 aaPredicted RBP13.26□□□□□ -0.29
SH3RF1-205ENST00000511421 SP4Q02446 784 aa13.26□□□□□ -0.29
SH3RF1-205ENST00000511421 BFSP2Q13515 415 aa13.26□□□□□ -0.29
SH3RF1-205ENST00000511421 TRIM50Q86XT4 487 aa13.26□□□□□ -0.29
SH3RF1-205ENST00000511421 TRIM22Q8IYM9 498 aa13.26□□□□□ -0.29
SH3RF1-205ENST00000511421 REXO1Q8N1G1 1221 aaKnown RBP13.26□□□□□ -0.29
SH3RF1-205ENST00000511421 CCDC148Q8NFR7 591 aa13.26□□□□□ -0.29
SH3RF1-205ENST00000511421 RASGRP4Q8TDF6 673 aa13.26□□□□□ -0.29
SH3RF1-205ENST00000511421 HERVK_113Q902F9 699 aa13.26□□□□□ -0.29
SH3RF1-205ENST00000511421 PKD2L1Q9P0L9 805 aa13.26□□□□□ -0.29
SH3RF1-205ENST00000511421 DOCK5Q9H7D0 1870 aa13.26□□□□□ -0.29
SH3RF1-205ENST00000511421 FAM86B1E9PN63 330 aa13.25□□□□□ -0.29
SH3RF1-205ENST00000511421 DEXIO95424 95 aa13.25□□□□□ -0.29
SH3RF1-205ENST00000511421 FAM86B2P0C5J1 330 aa13.25□□□□□ -0.29
SH3RF1-205ENST00000511421 IQCF3P0C7M6 154 aa13.25□□□□□ -0.29
SH3RF1-205ENST00000511421 TCF7P36402 384 aaPredicted RBP13.25□□□□□ -0.29
SH3RF1-205ENST00000511421 RBL2Q08999 1139 aa13.25□□□□□ -0.29
SH3RF1-205ENST00000511421 C8orf34Q49A92 452 aa13.25□□□□□ -0.29
SH3RF1-205ENST00000511421 UTP14CQ5TAP6 766 aaKnown RBP13.25□□□□□ -0.29
SH3RF1-205ENST00000511421 MCTP2Q6DN12 878 aa13.25□□□□□ -0.29
SH3RF1-205ENST00000511421 Q7L0L9 218 aa13.25□□□□□ -0.29
SH3RF1-205ENST00000511421 NIPA1Q7RTP0 329 aa13.25□□□□□ -0.29
SH3RF1-205ENST00000511421 RPUSD2Q8IZ73 545 aaKnown RBP13.25□□□□□ -0.29
SH3RF1-205ENST00000511421 CAGE1Q8TC20 777 aa13.25□□□□□ -0.29
SH3RF1-205ENST00000511421 SEPT1Q8WYJ6 367 aa13.25□□□□□ -0.29
SH3RF1-205ENST00000511421 SLKQ9H2G2 1235 aaPredicted RBP13.25□□□□□ -0.29
SH3RF1-205ENST00000511421 AGO4Q9HCK5 861 aaKnown RBP13.25□□□□□ -0.29
SH3RF1-205ENST00000511421 IGLV3-22A0A075B6J6 115 aa13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 EDIL3O43854 480 aa13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 FGBP02675 491 aa13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 SMIM10L2AP0DMW4 78 aa13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 SMIM10L2BP0DMW5 78 aa13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 PTK7Q13308 1070 aa13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 ITGB3BPQ13352 177 aaPredicted RBP13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 ANKRD1Q15327 319 aa13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 TRIM71Q2Q1W2 868 aaKnown RBP13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 FAM109BQ6ICB4 259 aaPredicted RBP13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 CPLX2Q6PUV4 134 aaKnown RBP13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 DEFB123Q8N688 67 aa13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 RETREG2Q8NC44 543 aa13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 BICD2Q8TD16 824 aa13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 WNT8BQ93098 351 aa13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 AIFM3Q96NN9 605 aa13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 RNPEPQ9H4A4 650 aa13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 NFASCO94856 1347 aa13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 RFC2P35250 354 aa13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 ZNF76P36508 570 aa13.24□□□□□ -0.29
SH3RF1-205ENST00000511421 NLRP5P59047 1200 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms