RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 SPDYE3A6NKU9 549 aa17.74■□□□□ 0.43
SH3TC1-220ENST00000511002 TIMP1P01033 207 aa17.74■□□□□ 0.43
SH3TC1-220ENST00000511002 CYP2C18P33260 490 aa17.74■□□□□ 0.43
SH3TC1-220ENST00000511002 AP3B2Q13367 1082 aa17.74■□□□□ 0.43
SH3TC1-220ENST00000511002 TRIM29Q14134 588 aa17.74■□□□□ 0.43
SH3TC1-220ENST00000511002 LRIT3Q3SXY7 679 aa17.74■□□□□ 0.43
SH3TC1-220ENST00000511002 TEX2Q8IWB9 1127 aa17.74■□□□□ 0.43
SH3TC1-220ENST00000511002 BLIDQ8IZY5 108 aa17.74■□□□□ 0.43
SH3TC1-220ENST00000511002 BICD2Q8TD16 824 aa17.74■□□□□ 0.43
SH3TC1-220ENST00000511002 OXER1Q8TDS5 423 aa17.74■□□□□ 0.43
SH3TC1-220ENST00000511002 KAT2BQ92831 832 aa17.74■□□□□ 0.43
SH3TC1-220ENST00000511002 INPP4AQ96PE3 977 aaPredicted RBP17.74■□□□□ 0.43
SH3TC1-220ENST00000511002 ANO3Q9BYT9 981 aa17.74■□□□□ 0.43
SH3TC1-220ENST00000511002 TELO2Q9Y4R8 837 aa17.74■□□□□ 0.43
SH3TC1-220ENST00000511002 M0R2N6 131 aa17.73■□□□□ 0.43
SH3TC1-220ENST00000511002 TLR3O15455 904 aaKnown RBP17.73■□□□□ 0.43
SH3TC1-220ENST00000511002 GGPS1O95749 300 aa17.73■□□□□ 0.43
SH3TC1-220ENST00000511002 MMP1P03956 469 aa17.73■□□□□ 0.43
SH3TC1-220ENST00000511002 CYP2C9P11712 490 aa17.73■□□□□ 0.43
SH3TC1-220ENST00000511002 HSDL1Q3SXM5 330 aa17.73■□□□□ 0.43
SH3TC1-220ENST00000511002 CELF3Q5SZQ8 465 aaKnown RBP17.73■□□□□ 0.43
SH3TC1-220ENST00000511002 MYSM1Q5VVJ2 828 aa17.73■□□□□ 0.43
SH3TC1-220ENST00000511002 GALNT17Q6IS24 598 aa17.73■□□□□ 0.43
SH3TC1-220ENST00000511002 DHX37Q8IY37 1157 aaKnown RBP17.73■□□□□ 0.43
SH3TC1-220ENST00000511002 EMID1Q96A84 441 aaPredicted RBP17.73■□□□□ 0.43
SH3TC1-220ENST00000511002 INTS4Q96HW7 963 aaKnown RBP17.73■□□□□ 0.43
SH3TC1-220ENST00000511002 FOSP01100 380 aaPredicted RBP17.72■□□□□ 0.43
SH3TC1-220ENST00000511002 ZNF286BP0CG31 522 aa17.72■□□□□ 0.43
SH3TC1-220ENST00000511002 CSF2RAP15509 400 aa17.72■□□□□ 0.43
SH3TC1-220ENST00000511002 CHMP4BP1P59074 171 aa17.72■□□□□ 0.43
SH3TC1-220ENST00000511002 FPGSQ05932 587 aa17.72■□□□□ 0.43
SH3TC1-220ENST00000511002 BRDTQ58F21 947 aaPredicted RBP17.72■□□□□ 0.43
SH3TC1-220ENST00000511002 FAM47CQ5HY64 1035 aa17.72■□□□□ 0.43
SH3TC1-220ENST00000511002 PCNX4Q63HM2 1172 aa17.72■□□□□ 0.43
SH3TC1-220ENST00000511002 MFSD5Q6N075 450 aa17.72■□□□□ 0.43
SH3TC1-220ENST00000511002 C16orf59Q7L2K0 433 aa17.72■□□□□ 0.43
SH3TC1-220ENST00000511002 NOC4LQ9BVI4 516 aaKnown RBP17.72■□□□□ 0.43
SH3TC1-220ENST00000511002 WNT8AQ9H1J5 351 aa17.72■□□□□ 0.43
SH3TC1-220ENST00000511002 KIF3AQ9Y496 699 aa17.72■□□□□ 0.43
SH3TC1-220ENST00000511002 SCN5AQ14524 2016 aa17.71■□□□□ 0.43
SH3TC1-220ENST00000511002 KPNA6O60684 536 aa17.71■□□□□ 0.43
SH3TC1-220ENST00000511002 ICAM3P32942 547 aa17.71■□□□□ 0.43
SH3TC1-220ENST00000511002 KRT2P35908 639 aa17.71■□□□□ 0.43
SH3TC1-220ENST00000511002 NR5A1Q13285 461 aa17.71■□□□□ 0.43
SH3TC1-220ENST00000511002 LAMC2Q13753 1193 aa17.71■□□□□ 0.43
SH3TC1-220ENST00000511002 DIS3L2Q8IYB7 885 aaKnown RBP17.71■□□□□ 0.43
SH3TC1-220ENST00000511002 SPRYD3Q8NCJ5 442 aa17.71■□□□□ 0.43
SH3TC1-220ENST00000511002 FBXO18Q8NFZ0 1043 aa17.71■□□□□ 0.43
SH3TC1-220ENST00000511002 PPTC7Q8NI37 304 aa17.71■□□□□ 0.43
SH3TC1-220ENST00000511002 SPATA33Q96N06 139 aa17.71■□□□□ 0.43
SH3TC1-220ENST00000511002 CTAGE1Q96RT6 745 aa17.71■□□□□ 0.43
SH3TC1-220ENST00000511002 HIPK3Q9H422 1215 aa17.71■□□□□ 0.43
SH3TC1-220ENST00000511002 TRIP12Q14669 1992 aaPredicted RBP17.71■□□□□ 0.43
SH3TC1-220ENST00000511002 FAM205CA6NFA0 338 aa17.7■□□□□ 0.42
SH3TC1-220ENST00000511002 SPATA31C2B4DYI2 1134 aa17.7■□□□□ 0.42
SH3TC1-220ENST00000511002 ACRP10323 421 aa17.7■□□□□ 0.42
SH3TC1-220ENST00000511002 HOXD8P13378 290 aaPredicted RBP17.7■□□□□ 0.42
SH3TC1-220ENST00000511002 SREBF1P36956 1147 aa17.7■□□□□ 0.42
SH3TC1-220ENST00000511002 CCL23P55773 120 aa17.7■□□□□ 0.42
SH3TC1-220ENST00000511002 MCTP2Q6DN12 878 aa17.7■□□□□ 0.42
SH3TC1-220ENST00000511002 TNFRSF25Q93038 417 aa17.7■□□□□ 0.42
SH3TC1-220ENST00000511002 VWCEQ96DN2 955 aa17.7■□□□□ 0.42
SH3TC1-220ENST00000511002 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.7■□□□□ 0.422e-6■□□□□ 10.7
SH3TC1-220ENST00000511002 EHMT1Q9H9B1 1298 aa17.7■□□□□ 0.42
SH3TC1-220ENST00000511002 BRMS1Q9HCU9 246 aa17.7■□□□□ 0.42
SH3TC1-220ENST00000511002 BTBD18B2RXH4 712 aa17.69■□□□□ 0.42
SH3TC1-220ENST00000511002 FIBPO43427 364 aa17.69■□□□□ 0.42
SH3TC1-220ENST00000511002 HSP90AA1P07900 732 aaKnown RBP17.69■□□□□ 0.42
SH3TC1-220ENST00000511002 TGFB3P10600 412 aa17.69■□□□□ 0.42
SH3TC1-220ENST00000511002 ITGB5P18084 799 aa17.69■□□□□ 0.42
SH3TC1-220ENST00000511002 PSEN2P49810 448 aa17.69■□□□□ 0.42
SH3TC1-220ENST00000511002 ARHGAP4P98171 946 aa17.69■□□□□ 0.42
SH3TC1-220ENST00000511002 DGKDQ16760 1214 aa17.69■□□□□ 0.42
SH3TC1-220ENST00000511002 EARS2Q5JPH6 523 aaKnown RBP17.69■□□□□ 0.42
SH3TC1-220ENST00000511002 GDF6Q6KF10 455 aaPredicted RBP17.69■□□□□ 0.42
SH3TC1-220ENST00000511002 NFRKBQ6P4R8 1299 aa17.69■□□□□ 0.42
SH3TC1-220ENST00000511002 KCNV1Q6PIU1 500 aa17.69■□□□□ 0.42
SH3TC1-220ENST00000511002 Q7L0L9 218 aa17.69■□□□□ 0.42
SH3TC1-220ENST00000511002 CRYGNQ8WXF5 182 aa17.69■□□□□ 0.42
SH3TC1-220ENST00000511002 SCLYQ96I15 445 aa17.69■□□□□ 0.42
SH3TC1-220ENST00000511002 HAS3O00219 553 aa17.68■□□□□ 0.42
SH3TC1-220ENST00000511002 ATP9AO75110 1047 aa17.68■□□□□ 0.42
SH3TC1-220ENST00000511002 STAM2O75886 525 aa17.68■□□□□ 0.42
SH3TC1-220ENST00000511002 F2P00734 622 aa17.68■□□□□ 0.42
SH3TC1-220ENST00000511002 BECN1Q14457 450 aa17.68■□□□□ 0.42
SH3TC1-220ENST00000511002 HIC1Q14526 733 aa17.68■□□□□ 0.42
SH3TC1-220ENST00000511002 GNPTABQ3T906 1256 aa17.68■□□□□ 0.42
SH3TC1-220ENST00000511002 TMEM240Q5SV17 173 aa17.68■□□□□ 0.42
SH3TC1-220ENST00000511002 CYFIP1Q7L576 1253 aa17.68■□□□□ 0.42
SH3TC1-220ENST00000511002 KRT25Q7Z3Z0 450 aa17.68■□□□□ 0.42
SH3TC1-220ENST00000511002 RNPC3Q96LT9 517 aaKnown RBP17.68■□□□□ 0.42
SH3TC1-220ENST00000511002 SEZ6LQ9BYH1 1024 aa17.68■□□□□ 0.42
SH3TC1-220ENST00000511002 MLXIPQ9HAP2 919 aa17.68■□□□□ 0.42
SH3TC1-220ENST00000511002 HDAC6Q9UBN7 1215 aa17.68■□□□□ 0.42
SH3TC1-220ENST00000511002 UBIAD1Q9Y5Z9 338 aa17.68■□□□□ 0.42
SH3TC1-220ENST00000511002 CCDC194A0A1B0GVG4 234 aa17.67■□□□□ 0.42
SH3TC1-220ENST00000511002 KIF28PB7ZC32 967 aa17.67■□□□□ 0.42
SH3TC1-220ENST00000511002 EDIL3O43854 480 aa17.67■□□□□ 0.42
SH3TC1-220ENST00000511002 ZNF200P98182 395 aaPredicted RBP17.67■□□□□ 0.42
SH3TC1-220ENST00000511002 SP4Q02446 784 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms