RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 DDX3XO00571 662 aaKnown RBP eCLIP10.52□□□□□ -0.73
USP53-206ENST00000510737 TTLL6Q8N841 843 aa10.52□□□□□ -0.73
USP53-206ENST00000510737 BORCS6Q96GS4 357 aa10.52□□□□□ -0.73
USP53-206ENST00000510737 C1orf159Q96HA4 380 aa10.52□□□□□ -0.73
USP53-206ENST00000510737 PCDH18Q9HCL0 1135 aa10.52□□□□□ -0.73
USP53-206ENST00000510737 SMPD4Q9NXE4 827 aa10.52□□□□□ -0.73
USP53-206ENST00000510737 MEFVO15553 781 aaPredicted RBP10.51□□□□□ -0.73
USP53-206ENST00000510737 PLATP00750 562 aa10.51□□□□□ -0.73
USP53-206ENST00000510737 ETFBP38117 255 aa10.51□□□□□ -0.73
USP53-206ENST00000510737 GFRA1P56159 465 aa10.51□□□□□ -0.73
USP53-206ENST00000510737 FAM26FQ5R3K3 315 aa10.51□□□□□ -0.73
USP53-206ENST00000510737 ARRDC4Q8NCT1 418 aa10.51□□□□□ -0.73
USP53-206ENST00000510737 GPR20Q99678 358 aa10.51□□□□□ -0.73
USP53-206ENST00000510737 WASF3Q9UPY6 502 aa10.51□□□□□ -0.73
USP53-206ENST00000510737 MROH6A6NGR9 719 aa10.5□□□□□ -0.73
USP53-206ENST00000510737 KCNAB2Q13303 367 aa10.5□□□□□ -0.73
USP53-206ENST00000510737 ACBD5Q5T8D3 534 aaPredicted RBP10.5□□□□□ -0.73
USP53-206ENST00000510737 ZC3H18Q86VM9 953 aaKnown RBP10.5□□□□□ -0.73
USP53-206ENST00000510737 TMEM145Q8NBT3 493 aa10.5□□□□□ -0.73
USP53-206ENST00000510737 TMEM169Q96HH4 297 aa10.5□□□□□ -0.73
USP53-206ENST00000510737 ZNF652Q9Y2D9 606 aa10.5□□□□□ -0.73
USP53-206ENST00000510737 MYRFQ9Y2G1 1151 aa10.5□□□□□ -0.73
USP53-206ENST00000510737 FRMPD1Q5SYB0 1578 aa10.5□□□□□ -0.73
USP53-206ENST00000510737 GRIA2P42262 883 aa10.49□□□□□ -0.73
USP53-206ENST00000510737 PPIL6Q8IXY8 311 aa10.49□□□□□ -0.73
USP53-206ENST00000510737 LRP2BPQ9P2M1 347 aa10.49□□□□□ -0.73
USP53-206ENST00000510737 PCDHA2Q9Y5H9 948 aa10.49□□□□□ -0.73
USP53-206ENST00000510737 RBM10P98175 930 aaKnown RBP10.48□□□□□ -0.73
USP53-206ENST00000510737 CDIP1Q9H305 208 aa10.48□□□□□ -0.73
USP53-206ENST00000510737 TMPRSS5Q9H3S3 457 aa10.48□□□□□ -0.73
USP53-206ENST00000510737 CARMIL1Q5VZK9 1371 aa10.48□□□□□ -0.73
USP53-206ENST00000510737 STRCQ7RTU9 1775 aa10.47□□□□□ -0.73
USP53-206ENST00000510737 TCRBV5S2A0A599 114 aa10.47□□□□□ -0.73
USP53-206ENST00000510737 TADA3O75528 432 aa10.47□□□□□ -0.73
USP53-206ENST00000510737 ZNF28P17035 718 aa10.47□□□□□ -0.73
USP53-206ENST00000510737 GTF2A2P52657 109 aa10.47□□□□□ -0.73
USP53-206ENST00000510737 ZSWIM3Q96MP5 696 aa10.47□□□□□ -0.73
USP53-206ENST00000510737 PRKAG3Q9UGI9 489 aa10.47□□□□□ -0.73
USP53-206ENST00000510737 ARHGEF40Q8TER5 1519 aa10.47□□□□□ -0.73
USP53-206ENST00000510737 LTBP4Q8N2S1 1624 aa10.47□□□□□ -0.73
USP53-206ENST00000510737 B4GALT3O60512 393 aa10.46□□□□□ -0.73
USP53-206ENST00000510737 DDAH1O94760 285 aa10.46□□□□□ -0.73
USP53-206ENST00000510737 LTBRP36941 435 aa10.46□□□□□ -0.73
USP53-206ENST00000510737 KCNJ6P48051 423 aa10.46□□□□□ -0.73
USP53-206ENST00000510737 KIAA2012Q0VF49 1180 aa10.46□□□□□ -0.73
USP53-206ENST00000510737 SLC35F1Q5T1Q4 408 aa10.46□□□□□ -0.73
USP53-206ENST00000510737 LGI4Q8N135 537 aa10.46□□□□□ -0.73
USP53-206ENST00000510737 C8orf49Q96NF6 230 aa10.46□□□□□ -0.73
USP53-206ENST00000510737 IQSEC2Q5JU85 1478 aa10.46□□□□□ -0.74
USP53-206ENST00000510737 IQGAP2Q13576 1575 aa10.46□□□□□ -0.74
USP53-206ENST00000510737 MED1Q15648 1581 aaPredicted RBP10.46□□□□□ -0.74
USP53-206ENST00000510737 YEATS2Q9ULM3 1422 aa10.45□□□□□ -0.74
USP53-206ENST00000510737 PHLDB1Q86UU1 1377 aa10.45□□□□□ -0.74
USP53-206ENST00000510737 HGSO14964 777 aaPredicted RBP10.45□□□□□ -0.74
USP53-206ENST00000510737 MYO1BO43795 1136 aa10.45□□□□□ -0.74
USP53-206ENST00000510737 CPP00450 1065 aa10.45□□□□□ -0.74
USP53-206ENST00000510737 LRG1P02750 347 aa10.45□□□□□ -0.74
USP53-206ENST00000510737 SSBP05455 408 aaKnown RBP eCLIP10.45□□□□□ -0.74
USP53-206ENST00000510737 TNFRSF1AP19438 455 aa10.45□□□□□ -0.74
USP53-206ENST00000510737 MLLT6P55198 1093 aaPredicted RBP10.45□□□□□ -0.74
USP53-206ENST00000510737 NKX3-2P78367 333 aa10.45□□□□□ -0.74
USP53-206ENST00000510737 LSAMPQ13449 338 aa10.45□□□□□ -0.74
USP53-206ENST00000510737 TNNI3KQ59H18 835 aa10.45□□□□□ -0.74
USP53-206ENST00000510737 EMC4Q5J8M3 183 aa10.45□□□□□ -0.74
USP53-206ENST00000510737 STEAP3Q658P3 488 aa10.45□□□□□ -0.74
USP53-206ENST00000510737 LIMS2Q7Z4I7 341 aa10.45□□□□□ -0.74
USP53-206ENST00000510737 MBD6Q96DN6 1003 aa10.45□□□□□ -0.74
USP53-206ENST00000510737 LOXL4Q96JB6 756 aa10.45□□□□□ -0.74
USP53-206ENST00000510737 CAPN10Q9HC96 672 aa10.45□□□□□ -0.74
USP53-206ENST00000510737 DTLQ9NZJ0 730 aa10.45□□□□□ -0.74
USP53-206ENST00000510737 NPFFR2Q9Y5X5 522 aa10.45□□□□□ -0.74
USP53-206ENST00000510737 H7BY64 318 aa10.44□□□□□ -0.74
USP53-206ENST00000510737 ZNF20P17024 532 aa10.44□□□□□ -0.74
USP53-206ENST00000510737 TEPPQ6URK8 271 aa10.44□□□□□ -0.74
USP53-206ENST00000510737 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.44□□□□□ -0.74
USP53-206ENST00000510737 CCDC140Q96MF4 163 aa10.44□□□□□ -0.74
USP53-206ENST00000510737 SAMD11Q96NU1 681 aa10.44□□□□□ -0.74
USP53-206ENST00000510737 CLDND1Q9NY35 253 aa10.44□□□□□ -0.74
USP53-206ENST00000510737 RBPJLQ9UBG7 517 aa10.44□□□□□ -0.74
USP53-206ENST00000510737 COA3Q9Y2R0 106 aaPredicted RBP10.44□□□□□ -0.74
USP53-206ENST00000510737 SIGLEC1Q9BZZ2 1709 aa10.44□□□□□ -0.74
USP53-206ENST00000510737 PREX1Q8TCU6 1659 aa10.44□□□□□ -0.74
USP53-206ENST00000510737 TTC37Q6PGP7 1564 aa10.43□□□□□ -0.74
USP53-206ENST00000510737 KIF27Q86VH2 1401 aa10.43□□□□□ -0.74
USP53-206ENST00000510737 GJB6O95452 261 aa10.43□□□□□ -0.74
USP53-206ENST00000510737 TOE1Q96GM8 510 aaKnown RBP10.43□□□□□ -0.74
USP53-206ENST00000510737 CHAMP1Q96JM3 812 aa10.43□□□□□ -0.74
USP53-206ENST00000510737 C1QTNF3Q9BXJ4 246 aa10.43□□□□□ -0.74
USP53-206ENST00000510737 PCDHB4Q9Y5E5 795 aa10.43□□□□□ -0.74
USP53-206ENST00000510737 MATN3O15232 486 aa10.42□□□□□ -0.74
USP53-206ENST00000510737 SLC10A6Q3KNW5 377 aa10.42□□□□□ -0.74
USP53-206ENST00000510737 CPZQ66K79 652 aa10.42□□□□□ -0.74
USP53-206ENST00000510737 ZCCHC14Q8WYQ9 949 aaKnown RBP10.42□□□□□ -0.74
USP53-206ENST00000510737 LCORQ96JN0 433 aaPredicted RBP10.42□□□□□ -0.74
USP53-206ENST00000510737 YTHDC1Q96MU7 727 aaKnown RBP10.42□□□□□ -0.74
USP53-206ENST00000510737 YIPF4Q9BSR8 244 aa10.42□□□□□ -0.74
USP53-206ENST00000510737 ZNF408Q9H9D4 720 aa10.42□□□□□ -0.74
USP53-206ENST00000510737 NGRNQ9NPE2 291 aaKnown RBP10.42□□□□□ -0.74
USP53-206ENST00000510737 KIAA0556O60303 1618 aa10.41□□□□□ -0.74
USP53-206ENST00000510737 MSCO60682 206 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms