RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 GOPCQ9HD26 462 aa18.37■□□□□ 0.53
CLMAT3-201ENST00000510576 TBC1D7Q9P0N9 293 aa18.37■□□□□ 0.53
CLMAT3-201ENST00000510576 ZNF70Q9UC06 446 aaPredicted RBP18.37■□□□□ 0.53
CLMAT3-201ENST00000510576 PUF60Q9UHX1 559 aaKnown RBP18.37■□□□□ 0.53
CLMAT3-201ENST00000510576 COL4A3BPQ9Y5P4 624 aa18.37■□□□□ 0.53
CLMAT3-201ENST00000510576 NPHP3-ACAD11A0A0J9YXS1 232 aa18.37■□□□□ 0.53
CLMAT3-201ENST00000510576 OPLAHO14841 1288 aa18.37■□□□□ 0.53
CLMAT3-201ENST00000510576 KRT86O43790 486 aa18.37■□□□□ 0.53
CLMAT3-201ENST00000510576 TAL1P17542 331 aaPredicted RBP18.37■□□□□ 0.53
CLMAT3-201ENST00000510576 CIITAP33076 1130 aa18.37■□□□□ 0.53
CLMAT3-201ENST00000510576 CCDC40Q4G0X9 1142 aa18.37■□□□□ 0.53
CLMAT3-201ENST00000510576 EHBP1Q8NDI1 1231 aa18.37■□□□□ 0.53
CLMAT3-201ENST00000510576 EPC1Q9H2F5 836 aa18.37■□□□□ 0.53
CLMAT3-201ENST00000510576 MMRN2Q9H8L6 949 aa18.37■□□□□ 0.53
CLMAT3-201ENST00000510576 FAM207AQ9NSI2 230 aaPredicted RBP18.37■□□□□ 0.53
CLMAT3-201ENST00000510576 PCDHA2Q9Y5H9 948 aa18.37■□□□□ 0.53
CLMAT3-201ENST00000510576 SMCHD1A6NHR9 2005 aa18.36■□□□□ 0.53
CLMAT3-201ENST00000510576 FAM86B1E9PN63 330 aa18.36■□□□□ 0.53
CLMAT3-201ENST00000510576 PIK3CDO00329 1044 aa18.36■□□□□ 0.53
CLMAT3-201ENST00000510576 RAD17O75943 681 aa18.36■□□□□ 0.53
CLMAT3-201ENST00000510576 FAM86B2P0C5J1 330 aa18.36■□□□□ 0.53
CLMAT3-201ENST00000510576 RPA1P27694 616 aa18.36■□□□□ 0.53
CLMAT3-201ENST00000510576 HOXA13P31271 388 aaPredicted RBP18.36■□□□□ 0.53
CLMAT3-201ENST00000510576 HNRNPH3P31942 346 aaKnown RBP18.36■□□□□ 0.53
CLMAT3-201ENST00000510576 ZNF76P36508 570 aa18.36■□□□□ 0.53
CLMAT3-201ENST00000510576 ECE1P42892 770 aa18.36■□□□□ 0.53
CLMAT3-201ENST00000510576 TUBB4BP68371 445 aa18.36■□□□□ 0.53
CLMAT3-201ENST00000510576 CACNB1Q02641 598 aaPredicted RBP18.36■□□□□ 0.53
CLMAT3-201ENST00000510576 CATSPER3Q86XQ3 398 aa18.36■□□□□ 0.53
CLMAT3-201ENST00000510576 TTLL6Q8N841 843 aa18.36■□□□□ 0.53
CLMAT3-201ENST00000510576 TANGO6Q9C0B7 1094 aa18.36■□□□□ 0.53
CLMAT3-201ENST00000510576 ZSWIM4Q9H7M6 989 aa18.36■□□□□ 0.53
CLMAT3-201ENST00000510576 PRDM10Q9NQV6 1147 aa18.36■□□□□ 0.53
CLMAT3-201ENST00000510576 DNM3Q9UQ16 869 aa18.36■□□□□ 0.53
CLMAT3-201ENST00000510576 TMX2Q9Y320 296 aa18.36■□□□□ 0.53
CLMAT3-201ENST00000510576 FRMD3A2A2Y4 597 aa18.35■□□□□ 0.53
CLMAT3-201ENST00000510576 PSMD14O00487 310 aa18.35■□□□□ 0.53
CLMAT3-201ENST00000510576 GNA14O95837 355 aa18.35■□□□□ 0.53
CLMAT3-201ENST00000510576 CYP3A4P08684 503 aa18.35■□□□□ 0.53
CLMAT3-201ENST00000510576 VIL1P09327 827 aaKnown RBP18.35■□□□□ 0.53
CLMAT3-201ENST00000510576 TEX2Q8IWB9 1127 aa18.35■□□□□ 0.53
CLMAT3-201ENST00000510576 NELFCDQ8IXH7 590 aa18.35■□□□□ 0.53
CLMAT3-201ENST00000510576 LARGE2Q8N3Y3 721 aa18.35■□□□□ 0.53
CLMAT3-201ENST00000510576 OGFOD1Q8N543 542 aa18.35■□□□□ 0.53
CLMAT3-201ENST00000510576 CCDC42Q96M95 316 aa18.35■□□□□ 0.53
CLMAT3-201ENST00000510576 PSMD1Q99460 953 aa18.35■□□□□ 0.53
CLMAT3-201ENST00000510576 FGFBP2Q9BYJ0 223 aa18.35■□□□□ 0.53
CLMAT3-201ENST00000510576 MYO6Q9UM54 1294 aa18.35■□□□□ 0.53
CLMAT3-201ENST00000510576 PLAGL2Q9UPG8 496 aa18.35■□□□□ 0.53
CLMAT3-201ENST00000510576 ATAD5Q96QE3 1844 aa18.35■□□□□ 0.53
CLMAT3-201ENST00000510576 ZRANB2O95218 330 aaKnown RBP eCLIP18.35■□□□□ 0.53
CLMAT3-201ENST00000510576 RAD51AP2Q09MP3 1159 aa18.35■□□□□ 0.53
CLMAT3-201ENST00000510576 ARSHQ5FYA8 562 aa18.35■□□□□ 0.53
CLMAT3-201ENST00000510576 NEK11Q8NG66 645 aa18.35■□□□□ 0.53
CLMAT3-201ENST00000510576 ACER1Q8TDN7 264 aa18.35■□□□□ 0.53
CLMAT3-201ENST00000510576 GMLQ99445 158 aa18.35■□□□□ 0.53
CLMAT3-201ENST00000510576 PARD6BQ9BYG5 372 aa18.35■□□□□ 0.53
CLMAT3-201ENST00000510576 ZHX3Q9H4I2 956 aa18.35■□□□□ 0.53
CLMAT3-201ENST00000510576 EMILIN3Q9NT22 766 aa18.35■□□□□ 0.53
CLMAT3-201ENST00000510576 ZBTB21Q9ULJ3 1066 aa18.35■□□□□ 0.53
CLMAT3-201ENST00000510576 CNTNAP1P78357 1384 aa18.34■□□□□ 0.53
CLMAT3-201ENST00000510576 EPHB6O15197 1021 aa18.34■□□□□ 0.53
CLMAT3-201ENST00000510576 MSH4O15457 936 aa18.34■□□□□ 0.53
CLMAT3-201ENST00000510576 ZSCAN20P17040 1043 aaPredicted RBP18.34■□□□□ 0.53
CLMAT3-201ENST00000510576 AMPD2Q01433 879 aa18.34■□□□□ 0.53
CLMAT3-201ENST00000510576 SPA17Q15506 151 aa18.34■□□□□ 0.53
CLMAT3-201ENST00000510576 SPDYE2Q495Y8 402 aa18.34■□□□□ 0.53
CLMAT3-201ENST00000510576 FAM83BQ5T0W9 1011 aa18.34■□□□□ 0.53
CLMAT3-201ENST00000510576 SYT2Q8N9I0 419 aaPredicted RBP18.34■□□□□ 0.53
CLMAT3-201ENST00000510576 FHOD1Q9Y613 1164 aa18.34■□□□□ 0.53
CLMAT3-201ENST00000510576 POTEB2H3BUK9 544 aa18.33■□□□□ 0.53
CLMAT3-201ENST00000510576 PNMA6AP0CW24 399 aaPredicted RBP18.33■□□□□ 0.53
CLMAT3-201ENST00000510576 SPATA31C1P0DKV0 1188 aa18.33■□□□□ 0.53
CLMAT3-201ENST00000510576 KIAA1755Q5JYT7 1200 aa18.33■□□□□ 0.53
CLMAT3-201ENST00000510576 PPP4R3CPQ6ZMV5 832 aa18.33■□□□□ 0.53
CLMAT3-201ENST00000510576 SCFD1Q8WVM8 642 aa18.33■□□□□ 0.53
CLMAT3-201ENST00000510576 EDEM3Q9BZQ6 932 aa18.33■□□□□ 0.53
CLMAT3-201ENST00000510576 TSGA10Q9BZW7 698 aa18.33■□□□□ 0.53
CLMAT3-201ENST00000510576 VAV3Q9UKW4 847 aa18.33■□□□□ 0.53
CLMAT3-201ENST00000510576 TFR2Q9UP52 801 aa18.33■□□□□ 0.53
CLMAT3-201ENST00000510576 CTAGE15A4D2H0 777 aa18.33■□□□□ 0.52
CLMAT3-201ENST00000510576 MEIS1O00470 390 aa18.33■□□□□ 0.52
CLMAT3-201ENST00000510576 CTAGE8P0CG41 777 aa18.33■□□□□ 0.52
CLMAT3-201ENST00000510576 ERCC3P19447 782 aa18.33■□□□□ 0.52
CLMAT3-201ENST00000510576 VAV2P52735 878 aa18.33■□□□□ 0.52
CLMAT3-201ENST00000510576 PABPC4Q13310 644 aaKnown RBP eCLIP18.33■□□□□ 0.52
CLMAT3-201ENST00000510576 RRAGAQ7L523 313 aa18.33■□□□□ 0.52
CLMAT3-201ENST00000510576 CTAGE6Q86UF2 777 aa18.33■□□□□ 0.52
CLMAT3-201ENST00000510576 CTAGE4Q8IX94 777 aa18.33■□□□□ 0.52
CLMAT3-201ENST00000510576 CHURC1Q8WUH1 139 aa18.33■□□□□ 0.52
CLMAT3-201ENST00000510576 KCTD10Q9H3F6 313 aa18.33■□□□□ 0.52
CLMAT3-201ENST00000510576 VEZTQ9HBM0 779 aa18.33■□□□□ 0.52
CLMAT3-201ENST00000510576 COL4A5P29400 1685 aa18.32■□□□□ 0.52
CLMAT3-201ENST00000510576 ATP8B1O43520 1251 aa18.32■□□□□ 0.52
CLMAT3-201ENST00000510576 MARSP56192 900 aaKnown RBP18.32■□□□□ 0.52
CLMAT3-201ENST00000510576 PSMC6P62333 389 aa18.32■□□□□ 0.52
CLMAT3-201ENST00000510576 KIF5AQ12840 1032 aa18.32■□□□□ 0.52
CLMAT3-201ENST00000510576 GIT2Q14161 759 aa18.32■□□□□ 0.52
CLMAT3-201ENST00000510576 CC2D1AQ6P1N0 951 aaPredicted RBP18.32■□□□□ 0.52
CLMAT3-201ENST00000510576 CCDC174Q6PII3 467 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms