RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 NOC3LQ8WTT2 800 aaKnown RBP8.37□□□□□ -1.07
CAST-228ENST00000509903 DHTKD1Q96HY7 919 aaPredicted RBP8.37□□□□□ -1.07
CAST-228ENST00000509903 PLIN4Q96Q06 1357 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 GTPBP4Q9BZE4 634 aaKnown RBP8.37□□□□□ -1.07
CAST-228ENST00000509903 TRIM9Q9C026 710 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 RIOX1Q9H6W3 641 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 MTMR4Q9NYA4 1195 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 SUGT1Q9Y2Z0 365 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 AKR1B1P15121 316 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 PPP1R2P41236 205 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 TXKP42681 527 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 NOVP48745 357 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 SF3B2Q13435 895 aaKnown RBP8.37□□□□□ -1.07
CAST-228ENST00000509903 BMS1Q14692 1282 aaKnown RBP8.37□□□□□ -1.07
CAST-228ENST00000509903 CALCRLQ16602 461 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 TMEM266Q2M3C6 531 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 TEX35Q5T0J7 233 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 TMCO3Q6UWJ1 677 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 CSGALNACT2Q8N6G5 542 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 ACRBPQ8NEB7 543 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 RNF34Q969K3 372 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 CDK5RAP3Q96JB5 506 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 USB1Q9BQ65 265 aaKnown RBP8.37□□□□□ -1.07
CAST-228ENST00000509903 RBCK1Q9BYM8 510 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 RAB34Q9BZG1 259 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 IRX2Q9BZI1 471 aaPredicted RBP8.37□□□□□ -1.07
CAST-228ENST00000509903 ZC3H12CQ9C0D7 883 aaKnown RBP8.37□□□□□ -1.07
CAST-228ENST00000509903 TGIF2Q9GZN2 237 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 CCSER2Q9H7U1 834 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 CUEDC1Q9NWM3 386 aaPredicted RBP8.37□□□□□ -1.07
CAST-228ENST00000509903 TMEM260Q9NX78 707 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 SERPINB13Q9UIV8 391 aa8.37□□□□□ -1.07
CAST-228ENST00000509903 A0A1W2PQC6 194 aa8.36□□□□□ -1.07
CAST-228ENST00000509903 TTLL1O95922 423 aa8.36□□□□□ -1.07
CAST-228ENST00000509903 ZSCAN20P17040 1043 aaPredicted RBP8.36□□□□□ -1.07
CAST-228ENST00000509903 BRD2P25440 801 aaKnown RBP8.36□□□□□ -1.07
CAST-228ENST00000509903 ERVK-24P63145 666 aa8.36□□□□□ -1.07
CAST-228ENST00000509903 EHHADHQ08426 723 aa8.36□□□□□ -1.07
CAST-228ENST00000509903 ZNF569Q5MCW4 686 aa8.36□□□□□ -1.07
CAST-228ENST00000509903 TTI2Q6NXR4 508 aa8.36□□□□□ -1.07
CAST-228ENST00000509903 CNNM4Q6P4Q7 775 aa8.36□□□□□ -1.07
CAST-228ENST00000509903 POTEHQ6S545 545 aa8.36□□□□□ -1.07
CAST-228ENST00000509903 IRF2BP1Q8IU81 584 aa8.36□□□□□ -1.07
CAST-228ENST00000509903 FAM114A1Q8IWE2 563 aa8.36□□□□□ -1.07
CAST-228ENST00000509903 MB21D1Q8N884 522 aa8.36□□□□□ -1.07
CAST-228ENST00000509903 HELQQ8TDG4 1101 aa8.36□□□□□ -1.07
CAST-228ENST00000509903 LRRC15Q8TF66 581 aa8.36□□□□□ -1.07
CAST-228ENST00000509903 GOLGA1Q92805 767 aa8.36□□□□□ -1.07
CAST-228ENST00000509903 P2RX5Q93086 422 aa8.36□□□□□ -1.07
CAST-228ENST00000509903 COA7Q96BR5 231 aa8.36□□□□□ -1.07
CAST-228ENST00000509903 TMX4Q9H1E5 349 aaPredicted RBP8.36□□□□□ -1.07
CAST-228ENST00000509903 VTI1BQ9UEU0 232 aa8.36□□□□□ -1.07
CAST-228ENST00000509903 LRWD1Q9UFC0 647 aa8.36□□□□□ -1.07
CAST-228ENST00000509903 SWAP70Q9UH65 585 aa8.36□□□□□ -1.07
CAST-228ENST00000509903 LUC7L2Q9Y383 392 aaKnown RBP8.36□□□□□ -1.07
CAST-228ENST00000509903 ATP6V0A2Q9Y487 856 aa8.36□□□□□ -1.07
CAST-228ENST00000509903 FOCADQ5VW36 1801 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 KLRG2A4D1S0 409 aaPredicted RBP8.35□□□□□ -1.07
CAST-228ENST00000509903 CTAGE9A4FU28 777 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 HLA-DOAP06340 250 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 CCNE1P24864 410 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 DNM2P50570 870 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 ATP2B2Q01814 1243 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 GABPAQ06546 454 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 CCDC96Q2M329 555 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 KIF4BQ2VIQ3 1234 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 FAM26DQ5JW98 314 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 SV2BQ7L1I2 683 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 CLEC10AQ8IUN9 316 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 GPR161Q8N6U8 529 aaKnown RBP8.35□□□□□ -1.07
CAST-228ENST00000509903 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.35□□□□□ -1.07
CAST-228ENST00000509903 OR8K1Q8NGG5 319 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 C7orf25Q9BPX7 421 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 SLF1Q9BQI6 1058 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 USP40Q9NVE5 1235 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 ZNF446Q9NWS9 450 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 LRRC37AA6NMS7 1700 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 A0A0U1RQJ8 604 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 TTC26A0AVF1 554 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 B4DLN1 442 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 RNF225M0QZC1 329 aaPredicted RBP8.35□□□□□ -1.07
CAST-228ENST00000509903 MPHOSPH10O00566 681 aaKnown RBP8.35□□□□□ -1.07
CAST-228ENST00000509903 SORBS3O60504 671 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 TRIM37O94972 964 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 MTIF2P46199 727 aaKnown RBP8.35□□□□□ -1.07
CAST-228ENST00000509903 SCNN1DP51172 638 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 DMTNQ08495 405 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 ZNF543Q08ER8 600 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 STK4Q13043 487 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 ATRIPQ8WXE1 791 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 TUBGCP2Q9BSJ2 902 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 MMTAG2Q9BU76 263 aaKnown RBP8.35□□□□□ -1.07
CAST-228ENST00000509903 DDX4Q9NQI0 724 aaKnown RBP8.35□□□□□ -1.07
CAST-228ENST00000509903 STK17AQ9UEE5 414 aa8.35□□□□□ -1.07
CAST-228ENST00000509903 MYO3BQ8WXR4 1341 aa8.34□□□□□ -1.07
CAST-228ENST00000509903 IGKV6D-41A0A0C4DH26 115 aa8.34□□□□□ -1.07
CAST-228ENST00000509903 PNMA6FA0A0J9YX94 578 aa8.34□□□□□ -1.07
CAST-228ENST00000509903 TDP2O95551 362 aa8.34□□□□□ -1.07
CAST-228ENST00000509903 SNHG28P0DPA3 235 aa8.34□□□□□ -1.07
CAST-228ENST00000509903 FCER1AP12319 257 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms