RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	EFHB	Q8N7U6	833 aa		11.49	□□□□□ -0.57
PTPN20-223	ENST00000509900	KCNG4	Q8TDN1	519 aa		11.49	□□□□□ -0.57
PTPN20-223	ENST00000509900	SUSD6	Q92537	303 aa		11.49	□□□□□ -0.57
PTPN20-223	ENST00000509900	COPS5	Q92905	334 aa		11.49	□□□□□ -0.57
PTPN20-223	ENST00000509900	KIAA1217	Q5T5P2	1943 aa		11.48	□□□□□ -0.57
PTPN20-223	ENST00000509900	BRD1	O95696	1058 aa		11.48	□□□□□ -0.57
PTPN20-223	ENST00000509900	MMP1	P03956	469 aa		11.48	□□□□□ -0.57
PTPN20-223	ENST00000509900	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
PTPN20-223	ENST00000509900	BRDT	Q58F21	947 aa	Predicted RBP	11.48	□□□□□ -0.57
PTPN20-223	ENST00000509900	C16orf86	Q6ZW13	317 aa		11.48	□□□□□ -0.57
PTPN20-223	ENST00000509900	ZBTB33	Q86T24	672 aa		11.48	□□□□□ -0.57
PTPN20-223	ENST00000509900	KREMEN2	Q8NCW0	462 aa		11.48	□□□□□ -0.57
PTPN20-223	ENST00000509900	SMOC2	Q9H3U7	446 aa		11.48	□□□□□ -0.57
PTPN20-223	ENST00000509900	GPR108	Q9NPR9	543 aa		11.48	□□□□□ -0.57
PTPN20-223	ENST00000509900	CYP39A1	Q9NYL5	469 aa		11.48	□□□□□ -0.57
PTPN20-223	ENST00000509900	TTC3	P53804	2025 aa		11.47	□□□□□ -0.57
PTPN20-223	ENST00000509900	RAD50	Q92878	1312 aa		11.47	□□□□□ -0.57
PTPN20-223	ENST00000509900	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	11.47	□□□□□ -0.57
PTPN20-223	ENST00000509900	CLCN5	P51795	746 aa		11.47	□□□□□ -0.57
PTPN20-223	ENST00000509900	ANGPT1	Q15389	498 aa		11.47	□□□□□ -0.57
PTPN20-223	ENST00000509900	KMT5B	Q4FZB7	885 aa		11.47	□□□□□ -0.57
PTPN20-223	ENST00000509900	PLEKHG4	Q58EX7	1191 aa		11.47	□□□□□ -0.57
PTPN20-223	ENST00000509900	MUM1L1	Q5H9M0	696 aa		11.47	□□□□□ -0.57
PTPN20-223	ENST00000509900	C12orf60	Q5U649	245 aa		11.47	□□□□□ -0.57
PTPN20-223	ENST00000509900	TMED8	Q6PL24	325 aa	Predicted RBP	11.47	□□□□□ -0.57
PTPN20-223	ENST00000509900	LCORL	Q8N3X6	602 aa		11.47	□□□□□ -0.57
PTPN20-223	ENST00000509900	FIBCD1	Q8N539	461 aa		11.47	□□□□□ -0.57
PTPN20-223	ENST00000509900	DCLK2	Q8N568	766 aa		11.47	□□□□□ -0.57
PTPN20-223	ENST00000509900	KAT2B	Q92831	832 aa		11.47	□□□□□ -0.57
PTPN20-223	ENST00000509900	TRERF1	Q96PN7	1200 aa		11.47	□□□□□ -0.57
PTPN20-223	ENST00000509900	TLR7	Q9NYK1	1049 aa	Known RBP	11.47	□□□□□ -0.57
PTPN20-223	ENST00000509900	GTF2IRD1	Q9UHL9	959 aa		11.47	□□□□□ -0.57
PTPN20-223	ENST00000509900	DBNL	Q9UJU6	430 aa	Known RBP	11.47	□□□□□ -0.57
PTPN20-223	ENST00000509900	FEM1B	Q9UK73	627 aa		11.47	□□□□□ -0.57
PTPN20-223	ENST00000509900	EMSY	Q7Z589	1322 aa		11.46	□□□□□ -0.57
PTPN20-223	ENST00000509900	PNMA6E	A0A0J9YXQ4	647 aa		11.46	□□□□□ -0.57
PTPN20-223	ENST00000509900	CFH	P08603	1231 aa		11.46	□□□□□ -0.57
PTPN20-223	ENST00000509900	ALAS1	P13196	640 aa		11.46	□□□□□ -0.57
PTPN20-223	ENST00000509900	DNAJB1	P25685	340 aa		11.46	□□□□□ -0.57
PTPN20-223	ENST00000509900	PPP2R5B	Q15173	497 aa		11.46	□□□□□ -0.57
PTPN20-223	ENST00000509900	CWF19L1	Q69YN2	538 aa	Known RBP	11.46	□□□□□ -0.57
PTPN20-223	ENST00000509900	UBALD2	Q8IYN6	164 aa		11.46	□□□□□ -0.57
PTPN20-223	ENST00000509900	LRRC47	Q8N1G4	583 aa	Known RBP	11.46	□□□□□ -0.57
PTPN20-223	ENST00000509900	IFIH1	Q9BYX4	1025 aa	Known RBP	11.46	□□□□□ -0.57
PTPN20-223	ENST00000509900	SEMA4A	Q9H3S1	761 aa		11.46	□□□□□ -0.57
PTPN20-223	ENST00000509900	NYAP2	Q9P242	653 aa		11.46	□□□□□ -0.57
PTPN20-223	ENST00000509900	HDAC6	Q9UBN7	1215 aa		11.46	□□□□□ -0.57
PTPN20-223	ENST00000509900	SORCS3	Q9UPU3	1222 aa		11.46	□□□□□ -0.57
PTPN20-223	ENST00000509900	MYH7	P12883	1935 aa		11.45	□□□□□ -0.58
PTPN20-223	ENST00000509900	RNF223	E7ERA6	249 aa		11.45	□□□□□ -0.58
PTPN20-223	ENST00000509900	NKRF	O15226	690 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
PTPN20-223	ENST00000509900	PRKAB2	O43741	272 aa		11.45	□□□□□ -0.58
PTPN20-223	ENST00000509900	SP100	P23497	879 aa	Predicted RBP	11.45	□□□□□ -0.58
PTPN20-223	ENST00000509900	NRIP1	P48552	1158 aa		11.45	□□□□□ -0.58
PTPN20-223	ENST00000509900	ALDH5A1	P51649	535 aa	Predicted RBP	11.45	□□□□□ -0.58
PTPN20-223	ENST00000509900	RBM10	P98175	930 aa	Known RBP	11.45	□□□□□ -0.58
PTPN20-223	ENST00000509900	PTK7	Q13308	1070 aa		11.45	□□□□□ -0.58
PTPN20-223	ENST00000509900	MTMR3	Q13615	1198 aa		11.45	□□□□□ -0.58
PTPN20-223	ENST00000509900	TKFC	Q3LXA3	575 aa		11.45	□□□□□ -0.58
PTPN20-223	ENST00000509900	CCDC105	Q8IYK2	499 aa		11.45	□□□□□ -0.58
PTPN20-223	ENST00000509900	CYP2W1	Q8TAV3	490 aa		11.45	□□□□□ -0.58
PTPN20-223	ENST00000509900	CLP1	Q92989	425 aa	Known RBP	11.45	□□□□□ -0.58
PTPN20-223	ENST00000509900	IL17RA	Q96F46	866 aa		11.45	□□□□□ -0.58
PTPN20-223	ENST00000509900	OSBPL7	Q9BZF2	842 aa		11.45	□□□□□ -0.58
PTPN20-223	ENST00000509900	PLAGL2	Q9UPG8	496 aa		11.45	□□□□□ -0.58
PTPN20-223	ENST00000509900	CACNA1I	Q9P0X4	2223 aa		11.45	□□□□□ -0.58
PTPN20-223	ENST00000509900	PI15	O43692	258 aa		11.44	□□□□□ -0.58
PTPN20-223	ENST00000509900	PDE6A	P16499	860 aa		11.44	□□□□□ -0.58
PTPN20-223	ENST00000509900	ATXN1	P54253	815 aa	Known RBP	11.44	□□□□□ -0.58
PTPN20-223	ENST00000509900	ZNF200	P98182	395 aa	Predicted RBP	11.44	□□□□□ -0.58
PTPN20-223	ENST00000509900	NSMF	Q6X4W1	530 aa		11.44	□□□□□ -0.58
PTPN20-223	ENST00000509900	RBM23	Q86U06	439 aa	Known RBP	11.44	□□□□□ -0.58
PTPN20-223	ENST00000509900	VN1R2	Q8NFZ6	395 aa		11.44	□□□□□ -0.58
PTPN20-223	ENST00000509900	PPP2R3C	Q969Q6	453 aa		11.44	□□□□□ -0.58
PTPN20-223	ENST00000509900	HAUS7	Q99871	368 aa		11.44	□□□□□ -0.58
PTPN20-223	ENST00000509900	HINFP	Q9BQA5	517 aa		11.44	□□□□□ -0.58
PTPN20-223	ENST00000509900	RC3H2	Q9HBD1	1191 aa	Known RBP	11.44	□□□□□ -0.58
PTPN20-223	ENST00000509900	RWDD3	Q9Y3V2	267 aa		11.44	□□□□□ -0.58
PTPN20-223	ENST00000509900		R4GN57	208 aa		11.44	□□□□□ -0.58
PTPN20-223	ENST00000509900	ADGRA3	Q8IWK6	1321 aa		11.43	□□□□□ -0.58
PTPN20-223	ENST00000509900	TCRBV5S4A2T	A0A5A2	114 aa		11.43	□□□□□ -0.58
PTPN20-223	ENST00000509900	ACTN4	O43707	911 aa	Known RBP	11.43	□□□□□ -0.58
PTPN20-223	ENST00000509900	ARIH2	O95376	493 aa		11.43	□□□□□ -0.58
PTPN20-223	ENST00000509900	MMP3	P08254	477 aa		11.43	□□□□□ -0.58
PTPN20-223	ENST00000509900	FDX1	P10109	184 aa		11.43	□□□□□ -0.58
PTPN20-223	ENST00000509900	HIC1	Q14526	733 aa		11.43	□□□□□ -0.58
PTPN20-223	ENST00000509900	KIAA0319	Q5VV43	1072 aa		11.43	□□□□□ -0.58
PTPN20-223	ENST00000509900	DTWD2	Q8NBA8	298 aa		11.43	□□□□□ -0.58
PTPN20-223	ENST00000509900	ATP8B4	Q8TF62	1192 aa		11.43	□□□□□ -0.58
PTPN20-223	ENST00000509900	SCFD2	Q8WU76	684 aa		11.43	□□□□□ -0.58
PTPN20-223	ENST00000509900	AFG1L	Q8WV93	481 aa		11.43	□□□□□ -0.58
PTPN20-223	ENST00000509900	RUBCN	Q92622	972 aa		11.43	□□□□□ -0.58
PTPN20-223	ENST00000509900	CHAMP1	Q96JM3	812 aa		11.43	□□□□□ -0.58
PTPN20-223	ENST00000509900	MFSD1	Q9H3U5	465 aa		11.43	□□□□□ -0.58
PTPN20-223	ENST00000509900	ARMT1	Q9H993	441 aa		11.43	□□□□□ -0.58
PTPN20-223	ENST00000509900	ZNF532	Q9HCE3	1301 aa		11.42	□□□□□ -0.58
PTPN20-223	ENST00000509900	LOC102724159	A0A0B4J2E5	919 aa		11.42	□□□□□ -0.58
PTPN20-223	ENST00000509900	RSPH10B2	B2RC85	870 aa		11.42	□□□□□ -0.58
PTPN20-223	ENST00000509900	ITGB1	P05556	798 aa		11.42	□□□□□ -0.58
PTPN20-223	ENST00000509900	ADRB1	P08588	477 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms