RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 CEP68Q76N32 757 aa3.85□□□□□ -1.79
DEPDC1B-204ENST00000509006 ZNF227Q86WZ6 799 aa3.85□□□□□ -1.79
DEPDC1B-204ENST00000509006 RCBTB1Q8NDN9 531 aa3.85□□□□□ -1.79
DEPDC1B-204ENST00000509006 CPLX3Q8WVH0 158 aa3.85□□□□□ -1.79
DEPDC1B-204ENST00000509006 BTN2A2Q8WVV5 523 aa3.85□□□□□ -1.79
DEPDC1B-204ENST00000509006 C1orf159Q96HA4 380 aa3.85□□□□□ -1.79
DEPDC1B-204ENST00000509006 CEP89Q96ST8 783 aa3.85□□□□□ -1.79
DEPDC1B-204ENST00000509006 ADOQ96SZ5 270 aa3.85□□□□□ -1.79
DEPDC1B-204ENST00000509006 ACBD3Q9H3P7 528 aa3.85□□□□□ -1.79
DEPDC1B-204ENST00000509006 NGRNQ9NPE2 291 aaKnown RBP3.85□□□□□ -1.79
DEPDC1B-204ENST00000509006 KIAA1522Q9P206 1035 aaPredicted RBP3.85□□□□□ -1.79
DEPDC1B-204ENST00000509006 WASF3Q9UPY6 502 aa3.85□□□□□ -1.79
DEPDC1B-204ENST00000509006 TCRBV5S2A0A599 114 aa3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 NARSO43776 548 aaKnown RBP3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 TADA3O75528 432 aa3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 ITGAVP06756 1048 aa3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 ATF4P18848 351 aaPredicted RBP3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 HOXC12P31275 282 aa3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 NANOS3P60323 173 aaKnown RBP3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 DGCR2P98153 550 aa3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 KCNAB2Q13303 367 aa3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 SF1Q15637 639 aaKnown RBP3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 PRSS53Q2L4Q9 553 aa3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 USP39Q53GS9 565 aaKnown RBP3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 HS1BP3Q53T59 392 aa3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 EMC4Q5J8M3 183 aa3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 C6orf15Q6UXA7 325 aaPredicted RBP3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 ARRDC4Q8NCT1 418 aa3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 NUDT10Q8NFP7 164 aa3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 DIO2Q92813 273 aa3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 ANAPC16Q96DE5 110 aa3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 NUDT11Q96G61 164 aa3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 TRMT2BQ96GJ1 504 aaKnown RBP3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 TOE1Q96GM8 510 aaKnown RBP3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 TMEM169Q96HH4 297 aa3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 TRIM8Q9BZR9 551 aa3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 TGIF2Q9GZN2 237 aa3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 CSRNP2Q9H175 543 aa3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 BARX1Q9HBU1 254 aaPredicted RBP3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 DTLQ9NZJ0 730 aa3.84□□□□□ -1.79
DEPDC1B-204ENST00000509006 H7BY64 318 aa3.83□□□□□ -1.8
DEPDC1B-204ENST00000509006 HGSO14964 777 aaPredicted RBP3.83□□□□□ -1.8
DEPDC1B-204ENST00000509006 MEFVO15553 781 aaPredicted RBP3.83□□□□□ -1.8
DEPDC1B-204ENST00000509006 CYP7B1O75881 506 aa3.83□□□□□ -1.8
DEPDC1B-204ENST00000509006 LRG1P02750 347 aa3.83□□□□□ -1.8
DEPDC1B-204ENST00000509006 COL6A1P12109 1028 aa3.83□□□□□ -1.8
DEPDC1B-204ENST00000509006 LCP1P13796 627 aa3.83□□□□□ -1.8
DEPDC1B-204ENST00000509006 GFRA1P56159 465 aa3.83□□□□□ -1.8
DEPDC1B-204ENST00000509006 PTH1RQ03431 593 aa3.83□□□□□ -1.8
DEPDC1B-204ENST00000509006 PHF19Q5T6S3 580 aa3.83□□□□□ -1.8
DEPDC1B-204ENST00000509006 MRM1Q6IN84 353 aaKnown RBP3.83□□□□□ -1.8
DEPDC1B-204ENST00000509006 TEPPQ6URK8 271 aa3.83□□□□□ -1.8
DEPDC1B-204ENST00000509006 TMC5Q6UXY8 1006 aa3.83□□□□□ -1.8
DEPDC1B-204ENST00000509006 RALYLQ86SE5 291 aaKnown RBP3.83□□□□□ -1.8
DEPDC1B-204ENST00000509006 LRRC37BQ96QE4 947 aa3.83□□□□□ -1.8
DEPDC1B-204ENST00000509006 CDIP1Q9H305 208 aa3.83□□□□□ -1.8
DEPDC1B-204ENST00000509006 HSPBP1Q9NZL4 362 aa3.83□□□□□ -1.8
DEPDC1B-204ENST00000509006 RBPJLQ9UBG7 517 aa3.83□□□□□ -1.8
DEPDC1B-204ENST00000509006 ADAM29Q9UKF5 820 aa3.83□□□□□ -1.8
DEPDC1B-204ENST00000509006 ZFR2Q9UPR6 939 aaKnown RBP3.83□□□□□ -1.8
DEPDC1B-204ENST00000509006 NPFFR2Q9Y5X5 522 aa3.83□□□□□ -1.8
DEPDC1B-204ENST00000509006 B2RBV5 119 aa3.82□□□□□ -1.8
DEPDC1B-204ENST00000509006 SMAD7O15105 426 aaKnown RBP3.82□□□□□ -1.8
DEPDC1B-204ENST00000509006 SUSD5O60279 629 aa3.82□□□□□ -1.8
DEPDC1B-204ENST00000509006 CPP00450 1065 aa3.82□□□□□ -1.8
DEPDC1B-204ENST00000509006 SNRPB2P08579 225 aaKnown RBP3.82□□□□□ -1.8
DEPDC1B-204ENST00000509006 LTBRP36941 435 aa3.82□□□□□ -1.8
DEPDC1B-204ENST00000509006 ECI1P42126 302 aa3.82□□□□□ -1.8
DEPDC1B-204ENST00000509006 PURAQ00577 322 aaKnown RBP3.82□□□□□ -1.8
DEPDC1B-204ENST00000509006 DPTQ07507 201 aa3.82□□□□□ -1.8
DEPDC1B-204ENST00000509006 HNRNPA0Q13151 305 aaKnown RBP3.82□□□□□ -1.8
DEPDC1B-204ENST00000509006 SLC35F1Q5T1Q4 408 aa3.82□□□□□ -1.8
DEPDC1B-204ENST00000509006 GPR155Q7Z3F1 870 aa3.82□□□□□ -1.8
DEPDC1B-204ENST00000509006 AMER2Q8N7J2 671 aa3.82□□□□□ -1.8
DEPDC1B-204ENST00000509006 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.82□□□□□ -1.8
DEPDC1B-204ENST00000509006 EXTL1Q92935 676 aa3.82□□□□□ -1.8
DEPDC1B-204ENST00000509006 PPP1R14AQ96A00 147 aa3.82□□□□□ -1.8
DEPDC1B-204ENST00000509006 MRRFQ96E11 262 aaKnown RBP3.82□□□□□ -1.8
DEPDC1B-204ENST00000509006 LMF1Q96S06 567 aa3.82□□□□□ -1.8
DEPDC1B-204ENST00000509006 WRNIP1Q96S55 665 aa3.82□□□□□ -1.8
DEPDC1B-204ENST00000509006 TMEM209Q96SK2 561 aa3.82□□□□□ -1.8
DEPDC1B-204ENST00000509006 TNFRSF18Q9Y5U5 241 aa3.82□□□□□ -1.8
DEPDC1B-204ENST00000509006 MYO1BO43795 1136 aa3.81□□□□□ -1.8
DEPDC1B-204ENST00000509006 MCM7P33993 719 aa3.81□□□□□ -1.8
DEPDC1B-204ENST00000509006 LSAMPQ13449 338 aa3.81□□□□□ -1.8
DEPDC1B-204ENST00000509006 CHRNA2Q15822 529 aa3.81□□□□□ -1.8
DEPDC1B-204ENST00000509006 KRTAP15-1Q3LI76 137 aa3.81□□□□□ -1.8
DEPDC1B-204ENST00000509006 LSM12Q3MHD2 195 aaKnown RBP3.81□□□□□ -1.8
DEPDC1B-204ENST00000509006 STEAP3Q658P3 488 aa3.81□□□□□ -1.8
DEPDC1B-204ENST00000509006 PROSER1Q86XN7 944 aa3.81□□□□□ -1.8
DEPDC1B-204ENST00000509006 FAM178BQ8IXR5 827 aa3.81□□□□□ -1.8
DEPDC1B-204ENST00000509006 PPIL6Q8IXY8 311 aa3.81□□□□□ -1.8
DEPDC1B-204ENST00000509006 TMEM145Q8NBT3 493 aa3.81□□□□□ -1.8
DEPDC1B-204ENST00000509006 GIMAP8Q8ND71 665 aaPredicted RBP3.81□□□□□ -1.8
DEPDC1B-204ENST00000509006 MICAL1Q8TDZ2 1067 aa3.81□□□□□ -1.8
DEPDC1B-204ENST00000509006 NEU4Q8WWR8 484 aaPredicted RBP3.81□□□□□ -1.8
DEPDC1B-204ENST00000509006 CCDC140Q96MF4 163 aa3.81□□□□□ -1.8
DEPDC1B-204ENST00000509006 SEC61A2Q9H9S3 476 aa3.81□□□□□ -1.8
DEPDC1B-204ENST00000509006 ACTR10Q9NZ32 417 aa3.81□□□□□ -1.8
DEPDC1B-204ENST00000509006 INPP5FQ9Y2H2 1132 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms