RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 ZC3H12DA2A288 527 aaKnown RBP8.37□□□□□ -1.07
GYPB-210ENST00000508841 ZNF561-AS1K7EIQ3 104 aa8.37□□□□□ -1.07
GYPB-210ENST00000508841 GAS7O60861 476 aa8.37□□□□□ -1.07
GYPB-210ENST00000508841 PDE6AP16499 860 aa8.37□□□□□ -1.07
GYPB-210ENST00000508841 SART3Q15020 963 aaKnown RBP8.37□□□□□ -1.07
GYPB-210ENST00000508841 FIGNQ5HY92 759 aa8.37□□□□□ -1.07
GYPB-210ENST00000508841 HHIPL2Q6UWX4 724 aa8.37□□□□□ -1.07
GYPB-210ENST00000508841 RPTNQ6XPR3 784 aa8.37□□□□□ -1.07
GYPB-210ENST00000508841 ARHGAP36Q6ZRI8 547 aa8.37□□□□□ -1.07
GYPB-210ENST00000508841 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.37□□□□□ -1.07
GYPB-210ENST00000508841 MYOTQ9UBF9 498 aa8.37□□□□□ -1.07
GYPB-210ENST00000508841 B4GALT6Q9UBX8 382 aa8.37□□□□□ -1.07
GYPB-210ENST00000508841 PCDHB4Q9Y5E5 795 aa8.37□□□□□ -1.07
GYPB-210ENST00000508841 COL4A3BPQ9Y5P4 624 aa8.37□□□□□ -1.07
GYPB-210ENST00000508841 SLC12A8A0AV02 714 aa8.36□□□□□ -1.07
GYPB-210ENST00000508841 FAM83GA6ND36 823 aa8.36□□□□□ -1.07
GYPB-210ENST00000508841 GJA4P35212 333 aa8.36□□□□□ -1.07
GYPB-210ENST00000508841 SCNN1BP51168 640 aa8.36□□□□□ -1.07
GYPB-210ENST00000508841 MECP2P51608 486 aaKnown RBP8.36□□□□□ -1.07
GYPB-210ENST00000508841 OCRLQ01968 901 aa8.36□□□□□ -1.07
GYPB-210ENST00000508841 PKN3Q6P5Z2 889 aa8.36□□□□□ -1.07
GYPB-210ENST00000508841 OTOP1Q7RTM1 612 aa8.36□□□□□ -1.07
GYPB-210ENST00000508841 CISD2Q8N5K1 135 aaKnown RBP8.36□□□□□ -1.07
GYPB-210ENST00000508841 LEO1Q8WVC0 666 aaPredicted RBP8.36□□□□□ -1.07
GYPB-210ENST00000508841 BOCQ9BWV1 1114 aa8.36□□□□□ -1.07
GYPB-210ENST00000508841 PDGFDQ9GZP0 370 aaPredicted RBP8.36□□□□□ -1.07
GYPB-210ENST00000508841 MTFR1LQ9H019 292 aa8.36□□□□□ -1.07
GYPB-210ENST00000508841 ZNF552Q9H707 407 aaPredicted RBP8.36□□□□□ -1.07
GYPB-210ENST00000508841 KLHL14Q9P2G3 628 aa8.36□□□□□ -1.07
GYPB-210ENST00000508841 SRPK3Q9UPE1 567 aa8.36□□□□□ -1.07
GYPB-210ENST00000508841 SGSM2O43147 1006 aa8.35□□□□□ -1.07
GYPB-210ENST00000508841 COL6A2P12110 1019 aa8.35□□□□□ -1.07
GYPB-210ENST00000508841 PLEKHN1Q494U1 663 aaPredicted RBP8.35□□□□□ -1.07
GYPB-210ENST00000508841 KCTD1Q719H9 257 aa8.35□□□□□ -1.07
GYPB-210ENST00000508841 MILR1Q7Z6M3 343 aa8.35□□□□□ -1.07
GYPB-210ENST00000508841 TTLL11Q8NHH1 800 aa8.35□□□□□ -1.07
GYPB-210ENST00000508841 SCYL1Q96KG9 808 aa8.35□□□□□ -1.07
GYPB-210ENST00000508841 ASH2LQ9UBL3 628 aa8.35□□□□□ -1.07
GYPB-210ENST00000508841 MCM8Q9UJA3 840 aa8.35□□□□□ -1.07
GYPB-210ENST00000508841 PALD1Q9ULE6 856 aa8.35□□□□□ -1.07
GYPB-210ENST00000508841 NOP58Q9Y2X3 529 aaKnown RBP8.35□□□□□ -1.07
GYPB-210ENST00000508841 NKRFO15226 690 aaKnown RBP eCLIP8.34□□□□□ -1.07
GYPB-210ENST00000508841 BRINP1O60477 761 aa8.34□□□□□ -1.07
GYPB-210ENST00000508841 PEX10O60683 326 aa8.34□□□□□ -1.07
GYPB-210ENST00000508841 CLASP2O75122 1294 aaKnown RBP8.34□□□□□ -1.07
GYPB-210ENST00000508841 HIP1RO75146 1068 aa8.34□□□□□ -1.07
GYPB-210ENST00000508841 F2P00734 622 aa8.34□□□□□ -1.07
GYPB-210ENST00000508841 C8AP07357 584 aa8.34□□□□□ -1.07
GYPB-210ENST00000508841 EPHA5P54756 1037 aa8.34□□□□□ -1.07
GYPB-210ENST00000508841 PCBP1Q15365 356 aaKnown RBP eCLIP8.34□□□□□ -1.07
GYPB-210ENST00000508841 OSTM1Q86WC4 334 aa8.34□□□□□ -1.07
GYPB-210ENST00000508841 NGRNQ9NPE2 291 aaKnown RBP8.34□□□□□ -1.07
GYPB-210ENST00000508841 PCDH12Q9NPG4 1184 aa8.34□□□□□ -1.07
GYPB-210ENST00000508841 ATP23Q9Y6H3 246 aa8.34□□□□□ -1.07
GYPB-210ENST00000508841 hCG_2014768A0A024R1R8 64 aa8.33□□□□□ -1.08
GYPB-210ENST00000508841 TRAF5O00463 557 aa8.33□□□□□ -1.08
GYPB-210ENST00000508841 ZEB2O60315 1214 aa8.33□□□□□ -1.08
GYPB-210ENST00000508841 AMY2AP04746 511 aa8.33□□□□□ -1.08
GYPB-210ENST00000508841 KRT15P19012 456 aa8.33□□□□□ -1.08
GYPB-210ENST00000508841 AMY2BP19961 511 aa8.33□□□□□ -1.08
GYPB-210ENST00000508841 JAM2P57087 298 aa8.33□□□□□ -1.08
GYPB-210ENST00000508841 PRR5P85299 388 aa8.33□□□□□ -1.08
GYPB-210ENST00000508841 NFKB2Q00653 900 aa8.33□□□□□ -1.08
GYPB-210ENST00000508841 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.33□□□□□ -1.08
GYPB-210ENST00000508841 AFAP1L2Q8N4X5 818 aa8.33□□□□□ -1.08
GYPB-210ENST00000508841 USP7Q93009 1102 aa8.33□□□□□ -1.08
GYPB-210ENST00000508841 EPB41L4BQ9H329 900 aa8.33□□□□□ -1.08
GYPB-210ENST00000508841 SMURF1Q9HCE7 757 aa8.33□□□□□ -1.08
GYPB-210ENST00000508841 TCRBV5S2A0A599 114 aa8.32□□□□□ -1.08
GYPB-210ENST00000508841 PTPDC1A2A3K4 754 aa8.32□□□□□ -1.08
GYPB-210ENST00000508841 ZNF503-AS2A6NEH8 195 aa8.32□□□□□ -1.08
GYPB-210ENST00000508841 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.32□□□□□ -1.08
GYPB-210ENST00000508841 H7C1D1 291 aa8.32□□□□□ -1.08
GYPB-210ENST00000508841 MAN2B1O00754 1011 aa8.32□□□□□ -1.08
GYPB-210ENST00000508841 SLC27A2O14975 620 aa8.32□□□□□ -1.08
GYPB-210ENST00000508841 SDHBP21912 280 aa8.32□□□□□ -1.08
GYPB-210ENST00000508841 DSG1Q02413 1049 aa8.32□□□□□ -1.08
GYPB-210ENST00000508841 PTRH1Q86Y79 214 aaKnown RBP8.32□□□□□ -1.08
GYPB-210ENST00000508841 ANKRD13AQ8IZ07 590 aa8.32□□□□□ -1.08
GYPB-210ENST00000508841 ALG3Q92685 438 aa8.32□□□□□ -1.08
GYPB-210ENST00000508841 TTC1Q99614 292 aa8.32□□□□□ -1.08
GYPB-210ENST00000508841 YIPF4Q9BSR8 244 aa8.32□□□□□ -1.08
GYPB-210ENST00000508841 RNF38Q9H0F5 515 aa8.32□□□□□ -1.08
GYPB-210ENST00000508841 SIT1Q9Y3P8 196 aa8.32□□□□□ -1.08
GYPB-210ENST00000508841 TCRBV5S4A2TA0A5A2 114 aa8.31□□□□□ -1.08
GYPB-210ENST00000508841 ANAPC15P60006 121 aa8.31□□□□□ -1.08
GYPB-210ENST00000508841 IGBP1P78318 339 aa8.31□□□□□ -1.08
GYPB-210ENST00000508841 IRF9Q00978 393 aa8.31□□□□□ -1.08
GYPB-210ENST00000508841 TUSC3Q13454 348 aa8.31□□□□□ -1.08
GYPB-210ENST00000508841 ZNF174Q15697 407 aa8.31□□□□□ -1.08
GYPB-210ENST00000508841 SEPT7Q16181 437 aaKnown RBP8.31□□□□□ -1.08
GYPB-210ENST00000508841 TMC6Q7Z403 805 aa8.31□□□□□ -1.08
GYPB-210ENST00000508841 ZNF605Q86T29 641 aa8.31□□□□□ -1.08
GYPB-210ENST00000508841 AMIGO3Q86WK7 504 aa8.31□□□□□ -1.08
GYPB-210ENST00000508841 MIB1Q86YT6 1006 aa8.31□□□□□ -1.08
GYPB-210ENST00000508841 SH3RF2Q8TEC5 729 aa8.31□□□□□ -1.08
GYPB-210ENST00000508841 IFT22Q9H7X7 185 aa8.31□□□□□ -1.08
GYPB-210ENST00000508841 DCP1AQ9NPI6 582 aaPredicted RBP8.31□□□□□ -1.08
GYPB-210ENST00000508841 SIRT5Q9NXA8 310 aa8.31□□□□□ -1.08
GYPB-210ENST00000508841 APOBEC2Q9Y235 224 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms