RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 PCDHB6Q9Y5E3 794 aa11.75□□□□□ -0.53
PTPN20-220ENST00000508715 DNAH12Q6ZR08 3092 aa11.75□□□□□ -0.53
PTPN20-220ENST00000508715 PDE4DIPQ5VU43 2346 aa11.75□□□□□ -0.53
PTPN20-220ENST00000508715 CEP290O15078 2479 aa11.75□□□□□ -0.53
PTPN20-220ENST00000508715 GSTTP1A0A1W2PQM5 241 aa11.74□□□□□ -0.53
PTPN20-220ENST00000508715 A6NJR5 290 aa11.74□□□□□ -0.53
PTPN20-220ENST00000508715 MAFGO15525 162 aa11.74□□□□□ -0.53
PTPN20-220ENST00000508715 MSCO60682 206 aa11.74□□□□□ -0.53
PTPN20-220ENST00000508715 CCNE2O96020 404 aa11.74□□□□□ -0.53
PTPN20-220ENST00000508715 GH1P01241 217 aa11.74□□□□□ -0.53
PTPN20-220ENST00000508715 HOXD8P13378 290 aaPredicted RBP11.74□□□□□ -0.53
PTPN20-220ENST00000508715 ATP2B1P20020 1258 aa11.74□□□□□ -0.53
PTPN20-220ENST00000508715 CST5P28325 142 aaPredicted RBP11.74□□□□□ -0.53
PTPN20-220ENST00000508715 ZNF76P36508 570 aa11.74□□□□□ -0.53
PTPN20-220ENST00000508715 SOX10P56693 466 aa11.74□□□□□ -0.53
PTPN20-220ENST00000508715 GNPTABQ3T906 1256 aa11.74□□□□□ -0.53
PTPN20-220ENST00000508715 CYFIP1Q7L576 1253 aa11.74□□□□□ -0.53
PTPN20-220ENST00000508715 OR6J1Q8NGC5 347 aa11.74□□□□□ -0.53
PTPN20-220ENST00000508715 AFG1LQ8WV93 481 aa11.74□□□□□ -0.53
PTPN20-220ENST00000508715 SLC5A5Q92911 643 aa11.74□□□□□ -0.53
PTPN20-220ENST00000508715 MTMR9Q96QG7 549 aa11.74□□□□□ -0.53
PTPN20-220ENST00000508715 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.74□□□□□ -0.53
PTPN20-220ENST00000508715 RNF216Q9NWF9 866 aaPredicted RBP11.74□□□□□ -0.53
PTPN20-220ENST00000508715 DDX25Q9UHL0 483 aaKnown RBP11.74□□□□□ -0.53
PTPN20-220ENST00000508715 EVPLQ92817 2033 aa11.74□□□□□ -0.53
PTPN20-220ENST00000508715 CCDC85CA6NKD9 419 aa11.73□□□□□ -0.53
PTPN20-220ENST00000508715 IPO5O00410 1097 aaKnown RBP11.73□□□□□ -0.53
PTPN20-220ENST00000508715 NKRFO15226 690 aaKnown RBP eCLIP11.73□□□□□ -0.53
PTPN20-220ENST00000508715 CCNT1O60563 726 aaKnown RBP11.73□□□□□ -0.53
PTPN20-220ENST00000508715 PSMD10O75832 226 aa11.73□□□□□ -0.53
PTPN20-220ENST00000508715 NFASCO94856 1347 aa11.73□□□□□ -0.53
PTPN20-220ENST00000508715 BRD1O95696 1058 aa11.73□□□□□ -0.53
PTPN20-220ENST00000508715 HSP90AA1P07900 732 aaKnown RBP11.73□□□□□ -0.53
PTPN20-220ENST00000508715 COL6A1P12109 1028 aa11.73□□□□□ -0.53
PTPN20-220ENST00000508715 ZNF174Q15697 407 aa11.73□□□□□ -0.53
PTPN20-220ENST00000508715 TTC38Q5R3I4 469 aa11.73□□□□□ -0.53
PTPN20-220ENST00000508715 FOXD4L5Q5VV16 416 aaPredicted RBP11.73□□□□□ -0.53
PTPN20-220ENST00000508715 KCNV1Q6PIU1 500 aa11.73□□□□□ -0.53
PTPN20-220ENST00000508715 FOXD4L4Q8WXT5 416 aaPredicted RBP11.73□□□□□ -0.53
PTPN20-220ENST00000508715 CHAMP1Q96JM3 812 aa11.73□□□□□ -0.53
PTPN20-220ENST00000508715 PCYT2Q99447 389 aa11.73□□□□□ -0.53
PTPN20-220ENST00000508715 TMEM106CQ9BVX2 250 aa11.73□□□□□ -0.53
PTPN20-220ENST00000508715 FTOQ9C0B1 505 aaKnown RBP eCLIP11.73□□□□□ -0.53
PTPN20-220ENST00000508715 GRIN2DO15399 1336 aa11.72□□□□□ -0.53
PTPN20-220ENST00000508715 ATG7O95352 703 aa11.72□□□□□ -0.53
PTPN20-220ENST00000508715 TFRCP02786 760 aaKnown RBP11.72□□□□□ -0.53
PTPN20-220ENST00000508715 MMP3P08254 477 aa11.72□□□□□ -0.53
PTPN20-220ENST00000508715 C6orf222P0C671 652 aaPredicted RBP11.72□□□□□ -0.53
PTPN20-220ENST00000508715 ZSCAN22P10073 491 aaPredicted RBP11.72□□□□□ -0.53
PTPN20-220ENST00000508715 GCFC2P16383 781 aaKnown RBP11.72□□□□□ -0.53
PTPN20-220ENST00000508715 MCM7P33993 719 aa11.72□□□□□ -0.53
PTPN20-220ENST00000508715 TRAPPC10P48553 1259 aa11.72□□□□□ -0.53
PTPN20-220ENST00000508715 SETQ01105 290 aaPredicted RBP11.72□□□□□ -0.53
PTPN20-220ENST00000508715 SPIRE1Q08AE8 756 aa11.72□□□□□ -0.53
PTPN20-220ENST00000508715 LAMC2Q13753 1193 aa11.72□□□□□ -0.53
PTPN20-220ENST00000508715 NEDD9Q14511 834 aa11.72□□□□□ -0.53
PTPN20-220ENST00000508715 KCNA10Q16322 511 aa11.72□□□□□ -0.53
PTPN20-220ENST00000508715 FSCN1Q16658 493 aaKnown RBP11.72□□□□□ -0.53
PTPN20-220ENST00000508715 METTL7BQ6UX53 244 aa11.72□□□□□ -0.53
PTPN20-220ENST00000508715 PPP4R3CPQ6ZMV5 832 aa11.72□□□□□ -0.53
PTPN20-220ENST00000508715 DHX37Q8IY37 1157 aaKnown RBP11.72□□□□□ -0.53
PTPN20-220ENST00000508715 KAT2BQ92831 832 aa11.72□□□□□ -0.53
PTPN20-220ENST00000508715 CDHR1Q96JP9 859 aa11.72□□□□□ -0.53
PTPN20-220ENST00000508715 GPR20Q99678 358 aa11.72□□□□□ -0.53
PTPN20-220ENST00000508715 ZNF577Q9BSK1 485 aa11.72□□□□□ -0.53
PTPN20-220ENST00000508715 VAV3Q9UKW4 847 aa11.72□□□□□ -0.53
PTPN20-220ENST00000508715 DDX39AO00148 427 aaKnown RBP11.71□□□□□ -0.53
PTPN20-220ENST00000508715 EML1O00423 815 aa11.71□□□□□ -0.53
PTPN20-220ENST00000508715 DNM1LO00429 736 aa11.71□□□□□ -0.53
PTPN20-220ENST00000508715 F13A1P00488 732 aa11.71□□□□□ -0.53
PTPN20-220ENST00000508715 PURAQ00577 322 aaKnown RBP11.71□□□□□ -0.53
PTPN20-220ENST00000508715 SP4Q02446 784 aa11.71□□□□□ -0.53
PTPN20-220ENST00000508715 GNL2Q13823 731 aaKnown RBP11.71□□□□□ -0.53
PTPN20-220ENST00000508715 PTPAQ15257 358 aa11.71□□□□□ -0.53
PTPN20-220ENST00000508715 IL17AQ16552 155 aa11.71□□□□□ -0.53
PTPN20-220ENST00000508715 GNASQ5JWF2 1037 aa11.71□□□□□ -0.53
PTPN20-220ENST00000508715 BRAPQ7Z569 592 aa11.71□□□□□ -0.53
PTPN20-220ENST00000508715 PPTC7Q8NI37 304 aa11.71□□□□□ -0.53
PTPN20-220ENST00000508715 PPP1R13LQ8WUF5 828 aa11.71□□□□□ -0.53
PTPN20-220ENST00000508715 SPATA33Q96N06 139 aa11.71□□□□□ -0.53
PTPN20-220ENST00000508715 C16orf70Q9BSU1 422 aa11.71□□□□□ -0.53
PTPN20-220ENST00000508715 AP5M1Q9H0R1 490 aa11.71□□□□□ -0.53
PTPN20-220ENST00000508715 UNC45AQ9H3U1 944 aa11.71□□□□□ -0.53
PTPN20-220ENST00000508715 SLC9A2Q9UBY0 812 aa11.71□□□□□ -0.53
PTPN20-220ENST00000508715 PHF24Q9UPV7 400 aa11.71□□□□□ -0.53
PTPN20-220ENST00000508715 IGKV6D-21A0A0A0MT36 114 aa11.7□□□□□ -0.54
PTPN20-220ENST00000508715 TBX3O15119 743 aa11.7□□□□□ -0.54
PTPN20-220ENST00000508715 NEMFO60524 1076 aa11.7□□□□□ -0.54
PTPN20-220ENST00000508715 ASGR1P07306 291 aa11.7□□□□□ -0.54
PTPN20-220ENST00000508715 ANP32AP39687 249 aaKnown RBP11.7□□□□□ -0.54
PTPN20-220ENST00000508715 ACLYP53396 1101 aa11.7□□□□□ -0.54
PTPN20-220ENST00000508715 ACTR2P61160 394 aa11.7□□□□□ -0.54
PTPN20-220ENST00000508715 RILPL1Q5EBL4 403 aa11.7□□□□□ -0.54
PTPN20-220ENST00000508715 LRCH2Q5VUJ6 765 aa11.7□□□□□ -0.54
PTPN20-220ENST00000508715 CXCL17Q6UXB2 119 aa11.7□□□□□ -0.54
PTPN20-220ENST00000508715 ABHD15Q6UXT9 468 aa11.7□□□□□ -0.54
PTPN20-220ENST00000508715 TRIM50Q86XT4 487 aa11.7□□□□□ -0.54
PTPN20-220ENST00000508715 ANKLE1Q8NAG6 615 aa11.7□□□□□ -0.54
PTPN20-220ENST00000508715 ARRDC4Q8NCT1 418 aa11.7□□□□□ -0.54
PTPN20-220ENST00000508715 FERMT2Q96AC1 680 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms