RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 KCNA2P16389 499 aa19.33■□□□□ 0.68
CLDND1-219ENST00000508659 XBP1P17861 261 aa19.33■□□□□ 0.68
CLDND1-219ENST00000508659 PSEN2P49810 448 aa19.33■□□□□ 0.68
CLDND1-219ENST00000508659 MFSD10Q14728 455 aa19.33■□□□□ 0.68
CLDND1-219ENST00000508659 ME3Q16798 604 aa19.33■□□□□ 0.68
CLDND1-219ENST00000508659 FAM177A1Q8N128 213 aaPredicted RBP19.33■□□□□ 0.68
CLDND1-219ENST00000508659 RASGRP4Q8TDF6 673 aa19.33■□□□□ 0.68
CLDND1-219ENST00000508659 PPP1R13LQ8WUF5 828 aa19.33■□□□□ 0.68
CLDND1-219ENST00000508659 MXRA8Q9BRK3 442 aa19.33■□□□□ 0.68
CLDND1-219ENST00000508659 LGALS2P05162 132 aa19.32■□□□□ 0.68
CLDND1-219ENST00000508659 RBM25P49756 843 aaKnown RBP19.32■□□□□ 0.68
CLDND1-219ENST00000508659 KIAA0753Q2KHM9 967 aa19.32■□□□□ 0.68
CLDND1-219ENST00000508659 SESTD1Q86VW0 696 aa19.32■□□□□ 0.68
CLDND1-219ENST00000508659 C7orf31Q8N865 590 aa19.32■□□□□ 0.68
CLDND1-219ENST00000508659 NECAB1Q8N987 351 aa19.32■□□□□ 0.68
CLDND1-219ENST00000508659 AIFM3Q96NN9 605 aa19.32■□□□□ 0.68
CLDND1-219ENST00000508659 GPR20Q99678 358 aa19.32■□□□□ 0.68
CLDND1-219ENST00000508659 ALG1Q9BT22 464 aa19.32■□□□□ 0.68
CLDND1-219ENST00000508659 BCAS3Q9H6U6 928 aa19.32■□□□□ 0.68
CLDND1-219ENST00000508659 KCNH7Q9NS40 1196 aa19.32■□□□□ 0.68
CLDND1-219ENST00000508659 ATP9AO75110 1047 aa19.31■□□□□ 0.68
CLDND1-219ENST00000508659 SETQ01105 290 aaPredicted RBP19.31■□□□□ 0.68
CLDND1-219ENST00000508659 MFSD5Q6N075 450 aa19.31■□□□□ 0.68
CLDND1-219ENST00000508659 TMEM199Q8N511 208 aa19.31■□□□□ 0.68
CLDND1-219ENST00000508659 CYP2W1Q8TAV3 490 aa19.31■□□□□ 0.68
CLDND1-219ENST00000508659 WASF1Q92558 559 aa19.31■□□□□ 0.68
CLDND1-219ENST00000508659 SDF4Q9BRK5 362 aa19.31■□□□□ 0.68
CLDND1-219ENST00000508659 JPH1Q9HDC5 661 aaPredicted RBP19.31■□□□□ 0.68
CLDND1-219ENST00000508659 ZNF215Q9UL58 517 aaPredicted RBP19.31■□□□□ 0.68
CLDND1-219ENST00000508659 PCDHA4Q9UN74 947 aa19.31■□□□□ 0.68
CLDND1-219ENST00000508659 HAS3O00219 553 aa19.3■□□□□ 0.68
CLDND1-219ENST00000508659 ADAMTS3O15072 1205 aa19.3■□□□□ 0.68
CLDND1-219ENST00000508659 GALNT17Q6IS24 598 aa19.3■□□□□ 0.68
CLDND1-219ENST00000508659 NIPA1Q7RTP0 329 aa19.3■□□□□ 0.68
CLDND1-219ENST00000508659 DAGLBQ8NCG7 672 aa19.3■□□□□ 0.68
CLDND1-219ENST00000508659 CRYGNQ8WXF5 182 aa19.3■□□□□ 0.68
CLDND1-219ENST00000508659 C16orf70Q9BSU1 422 aa19.3■□□□□ 0.68
CLDND1-219ENST00000508659 NOC4LQ9BVI4 516 aaKnown RBP19.3■□□□□ 0.68
CLDND1-219ENST00000508659 ORC3Q9UBD5 711 aaPredicted RBP19.3■□□□□ 0.68
CLDND1-219ENST00000508659 GTF2IRD1Q9UHL9 959 aa19.3■□□□□ 0.68
CLDND1-219ENST00000508659 FAM86B1E9PN63 330 aa19.29■□□□□ 0.68
CLDND1-219ENST00000508659 H3BRB1 525 aa19.29■□□□□ 0.68
CLDND1-219ENST00000508659 CTDNEP1O95476 244 aa19.29■□□□□ 0.68
CLDND1-219ENST00000508659 CYP3A4P08684 503 aa19.29■□□□□ 0.68
CLDND1-219ENST00000508659 FAM86B2P0C5J1 330 aa19.29■□□□□ 0.68
CLDND1-219ENST00000508659 CYP2C9P11712 490 aa19.29■□□□□ 0.68
CLDND1-219ENST00000508659 CYP2C18P33260 490 aa19.29■□□□□ 0.68
CLDND1-219ENST00000508659 TCF7P36402 384 aaPredicted RBP19.29■□□□□ 0.68
CLDND1-219ENST00000508659 FXR1P51114 621 aaKnown RBP eCLIP19.29■□□□□ 0.68
CLDND1-219ENST00000508659 PPIGQ13427 754 aaKnown RBP eCLIP19.29■□□□□ 0.68
CLDND1-219ENST00000508659 PTGISQ16647 500 aa19.29■□□□□ 0.68
CLDND1-219ENST00000508659 UTP14CQ5TAP6 766 aaKnown RBP19.29■□□□□ 0.68
CLDND1-219ENST00000508659 PLA2G4DQ86XP0 818 aa19.29■□□□□ 0.68
CLDND1-219ENST00000508659 TRIM50Q86XT4 487 aa19.29■□□□□ 0.68
CLDND1-219ENST00000508659 BLIDQ8IZY5 108 aa19.29■□□□□ 0.68
CLDND1-219ENST00000508659 CCDC155Q8N6L0 562 aa19.29■□□□□ 0.68
CLDND1-219ENST00000508659 TUT1Q9H6E5 874 aaKnown RBP19.29■□□□□ 0.68
CLDND1-219ENST00000508659 AGO4Q9HCK5 861 aaKnown RBP19.29■□□□□ 0.68
CLDND1-219ENST00000508659 LIMCH1Q9UPQ0 1083 aa19.29■□□□□ 0.68
CLDND1-219ENST00000508659 UMODL1Q5DID0 1318 aa19.28■□□□□ 0.68
CLDND1-219ENST00000508659 MEIS1O00470 390 aa19.28■□□□□ 0.68
CLDND1-219ENST00000508659 ARP10275 920 aa19.28■□□□□ 0.68
CLDND1-219ENST00000508659 CSF2RAP15509 400 aa19.28■□□□□ 0.68
CLDND1-219ENST00000508659 GDF6Q6KF10 455 aaPredicted RBP19.28■□□□□ 0.68
CLDND1-219ENST00000508659 NSUN7Q8NE18 718 aaKnown RBP19.28■□□□□ 0.68
CLDND1-219ENST00000508659 KIF2CQ99661 725 aa19.28■□□□□ 0.68
CLDND1-219ENST00000508659 HDAC6Q9UBN7 1215 aa19.28■□□□□ 0.68
CLDND1-219ENST00000508659 SLC9A2Q9UBY0 812 aa19.28■□□□□ 0.68
CLDND1-219ENST00000508659 TELO2Q9Y4R8 837 aa19.28■□□□□ 0.68
CLDND1-219ENST00000508659 TRIOBPQ9H2D6 2365 aa19.28■□□□□ 0.68
CLDND1-219ENST00000508659 NFASCO94856 1347 aa19.27■□□□□ 0.68
CLDND1-219ENST00000508659 LAMA3Q16787 3333 aa19.27■□□□□ 0.68
CLDND1-219ENST00000508659 IGLV3-22A0A075B6J6 115 aa19.27■□□□□ 0.68
CLDND1-219ENST00000508659 DTNBO60941 627 aa19.27■□□□□ 0.68
CLDND1-219ENST00000508659 RABEP1Q15276 862 aa19.27■□□□□ 0.68
CLDND1-219ENST00000508659 TBCKQ8TEA7 893 aa19.27■□□□□ 0.68
CLDND1-219ENST00000508659 SEPT1Q8WYJ6 367 aa19.27■□□□□ 0.68
CLDND1-219ENST00000508659 PHF20Q9BVI0 1012 aa19.27■□□□□ 0.68
CLDND1-219ENST00000508659 TCEAL9Q9UHQ7 104 aa19.27■□□□□ 0.68
CLDND1-219ENST00000508659 KCNJ14Q9UNX9 436 aa19.27■□□□□ 0.68
CLDND1-219ENST00000508659 PITPNM1O00562 1244 aa19.26■□□□□ 0.67
CLDND1-219ENST00000508659 ST18O60284 1047 aa19.26■□□□□ 0.67
CLDND1-219ENST00000508659 CCL23P55773 120 aa19.26■□□□□ 0.67
CLDND1-219ENST00000508659 ITGB3BPQ13352 177 aaPredicted RBP19.26■□□□□ 0.67
CLDND1-219ENST00000508659 BFSP2Q13515 415 aa19.26■□□□□ 0.67
CLDND1-219ENST00000508659 NPY5RQ15761 445 aa19.26■□□□□ 0.67
CLDND1-219ENST00000508659 LRIT3Q3SXY7 679 aa19.26■□□□□ 0.67
CLDND1-219ENST00000508659 PRR16Q569H4 304 aa19.26■□□□□ 0.67
CLDND1-219ENST00000508659 C9orf50Q5SZB4 431 aa19.26■□□□□ 0.67
CLDND1-219ENST00000508659 PSRC1Q6PGN9 363 aaPredicted RBP19.26■□□□□ 0.67
CLDND1-219ENST00000508659 CAGE1Q8TC20 777 aa19.26■□□□□ 0.67
CLDND1-219ENST00000508659 RNPC3Q96LT9 517 aaKnown RBP19.26■□□□□ 0.67
CLDND1-219ENST00000508659 ZNF577Q9BSK1 485 aa19.26■□□□□ 0.67
CLDND1-219ENST00000508659 WNT8AQ9H1J5 351 aa19.26■□□□□ 0.67
CLDND1-219ENST00000508659 BRMS1Q9HCU9 246 aa19.26■□□□□ 0.67
CLDND1-219ENST00000508659 GTF3C3Q9Y5Q9 886 aa19.26■□□□□ 0.67
CLDND1-219ENST00000508659 EMSYQ7Z589 1322 aa19.25■□□□□ 0.67
CLDND1-219ENST00000508659 C17orf102A2RUQ5 167 aa19.25■□□□□ 0.67
CLDND1-219ENST00000508659 DDX39AO00148 427 aaKnown RBP19.25■□□□□ 0.67
CLDND1-219ENST00000508659 IPO5O00410 1097 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms