RNA–Protein interactions for RNA: ENST00000508297.2

ATP2C1-213, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 540 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-213ENST00000508297 ZBTB37Q5TC79 503 aa4.8□□□□□ -1.64
ATP2C1-213ENST00000508297 ZKSCAN2Q63HK3 967 aa4.8□□□□□ -1.64
ATP2C1-213ENST00000508297 SWSAP1Q6NVH7 229 aa4.8□□□□□ -1.64
ATP2C1-213ENST00000508297 TBC1D1Q86TI0 1168 aaPredicted RBP4.8□□□□□ -1.64
ATP2C1-213ENST00000508297 OR2C3Q8N628 320 aa4.8□□□□□ -1.64
ATP2C1-213ENST00000508297 CCDC155Q8N6L0 562 aa4.8□□□□□ -1.64
ATP2C1-213ENST00000508297 ZSCAN18Q8TBC5 510 aaPredicted RBP4.8□□□□□ -1.64
ATP2C1-213ENST00000508297 SNRNP27Q8WVK2 155 aaKnown RBP4.8□□□□□ -1.64
ATP2C1-213ENST00000508297 TBC1D20Q96BZ9 403 aa4.8□□□□□ -1.64
ATP2C1-213ENST00000508297 CDK5RAP3Q96JB5 506 aa4.8□□□□□ -1.64
ATP2C1-213ENST00000508297 SLC2A13Q96QE2 648 aa4.8□□□□□ -1.64
ATP2C1-213ENST00000508297 NELL2Q99435 816 aa4.8□□□□□ -1.64
ATP2C1-213ENST00000508297 LPIN3Q9BQK8 851 aa4.8□□□□□ -1.64
ATP2C1-213ENST00000508297 ISCA1Q9BUE6 129 aa4.8□□□□□ -1.64
ATP2C1-213ENST00000508297 PHF20Q9BVI0 1012 aa4.8□□□□□ -1.64
ATP2C1-213ENST00000508297 B3GNT5Q9BYG0 378 aa4.8□□□□□ -1.64
ATP2C1-213ENST00000508297 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.8□□□□□ -1.64
ATP2C1-213ENST00000508297 NUCKS1Q9H1E3 243 aaKnown RBP4.8□□□□□ -1.64
ATP2C1-213ENST00000508297 SOX17Q9H6I2 414 aaPredicted RBP4.8□□□□□ -1.64
ATP2C1-213ENST00000508297 IFT122Q9HBG6 1241 aa4.8□□□□□ -1.64
ATP2C1-213ENST00000508297 ZNF652Q9Y2D9 606 aa4.8□□□□□ -1.64
ATP2C1-213ENST00000508297 LRCH1Q9Y2L9 728 aa4.8□□□□□ -1.64
ATP2C1-213ENST00000508297 PCDHA11Q9Y5I1 949 aa4.8□□□□□ -1.64
ATP2C1-213ENST00000508297 LRRFIP2Q9Y608 721 aaKnown RBP4.8□□□□□ -1.64
ATP2C1-213ENST00000508297 COL17A1Q9UMD9 1497 aaPredicted RBP4.8□□□□□ -1.64
ATP2C1-213ENST00000508297 FAM177BA6PVY3 158 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 NCAM2O15394 837 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 UBXN7O94888 489 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 MBD4O95243 580 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 DLGAP3O95886 979 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 CD4P01730 458 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 IFIT1P09914 478 aaKnown RBP4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 DNM2P50570 870 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 CABP4P57796 275 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 FAM193AP78312 1265 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 MPP1Q00013 466 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 NUCB1Q02818 461 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 TNFAIP2Q03169 654 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 SLBPQ14493 270 aaKnown RBP eCLIP4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 DBN1Q16643 649 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 DPY19L1Q2PZI1 675 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 NBPF8Q3BBV2 869 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 RGL3Q3MIN7 710 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 RNFT1Q5M7Z0 435 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 GPATCH4Q5T3I0 446 aaKnown RBP4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 KRT77Q7Z794 578 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 SYT9Q86SS6 491 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 SAPCD2Q86UD0 394 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 HID1Q8IV36 788 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 KIAA0319LQ8IZA0 1049 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 VWA5B2Q8N398 1253 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 CRACR2BQ8N4Y2 399 aaPredicted RBP4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 BEND7Q8N7W2 519 aaPredicted RBP4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 NAXEQ8NCW5 288 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 PPP1R13LQ8WUF5 828 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 VWCEQ96DN2 955 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 CCDC140Q96MF4 163 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 MCMBPQ9BTE3 642 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 LRFN3Q9BTN0 628 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 WDR18Q9BV38 432 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 CELF4Q9BZC1 486 aaKnown RBP4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 MYLK2Q9H1R3 596 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 TMEM60Q9H2L4 133 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 AGO4Q9HCK5 861 aaKnown RBP4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 RIC8AQ9NPQ8 531 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 BLOC1S4Q9NUP1 217 aa4.79□□□□□ -1.64
ATP2C1-213ENST00000508297 BAZ1AQ9NRL2 1556 aaPredicted RBP4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 A0A087WV62 115 aa4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 FAM155AB1AL88 458 aaPredicted RBP4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 KPNA5O15131 536 aa4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 DDX3YO15523 660 aaKnown RBP4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 ANP32CO43423 234 aa4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 ORC4O43929 436 aa4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 ADAMTS2O95450 1211 aa4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 LCP1P13796 627 aa4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 SLC9A1P19634 815 aa4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 ITGA6P23229 1130 aa4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 TNFSF4P23510 183 aa4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 PEX2P28328 305 aa4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 GPR85P60893 370 aa4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 CTBSQ01459 385 aa4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 ALDH6A1Q02252 535 aaKnown RBP4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 C19orf57Q0VDD7 668 aa4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 SCRN1Q12765 414 aa4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 IFIT5Q13325 482 aaKnown RBP4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 SNW1Q13573 536 aaKnown RBP4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 INTS11Q5TA45 600 aaKnown RBP4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 RNF220Q5VTB9 566 aa4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 PRAMEF13Q5VWM6 474 aa4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 ELMSAN1Q6PJG2 1045 aa4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 NPNTQ6UXI9 565 aa4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 CYP26C1Q6V0L0 522 aa4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 PPIL6Q8IXY8 311 aa4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 OR8H2Q8N162 312 aa4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 MIER2Q8N344 545 aa4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 FIBCD1Q8N539 461 aa4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 FAM26EQ8N5C1 309 aa4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 CISD2Q8N5K1 135 aaKnown RBP4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 CAMKK1Q8N5S9 505 aa4.78□□□□□ -1.64
ATP2C1-213ENST00000508297 EFHBQ8N7U6 833 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms