RNA–Protein interactions for RNA: ENST00000508236.1

CCDC149-206, Transcript of coiled-coil domain containing 149, humanhuman

TSL 4

Gene CCDC149, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-206ENST00000508236 SPOCK3Q9BQ16 436 aa9.24□□□□□ -0.93
CCDC149-206ENST00000508236 CARD10Q9BWT7 1032 aa9.24□□□□□ -0.93
CCDC149-206ENST00000508236 PICK1Q9NRD5 415 aa9.24□□□□□ -0.93
CCDC149-206ENST00000508236 APEX2Q9UBZ4 518 aa9.24□□□□□ -0.93
CCDC149-206ENST00000508236 KIF3AQ9Y496 699 aa9.24□□□□□ -0.93
CCDC149-206ENST00000508236 PCDHGC5Q9Y5F6 944 aa9.24□□□□□ -0.93
CCDC149-206ENST00000508236 ERBB4Q15303 1308 aa9.24□□□□□ -0.93
CCDC149-206ENST00000508236 C9IYK1 514 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 CAND2O75155 1236 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 UBOX5O94941 541 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 NPTXRO95502 500 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 SCGB1D2O95969 90 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 GRIA2P42262 883 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 RAB27AP51159 221 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 NEK2P51955 445 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 AK2P54819 239 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 ERVK-24P63145 666 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 ZBTB37Q5TC79 503 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 VPS53Q5VIR6 699 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 SLC6A19Q695T7 634 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 LRSAM1Q6UWE0 723 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 SV2AQ7L0J3 742 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 OSBP2Q969R2 916 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 EAF2Q96CJ1 260 aaPredicted RBP9.23□□□□□ -0.93
CCDC149-206ENST00000508236 KLHDC7BQ96G42 594 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 ZNF496Q96IT1 587 aaPredicted RBP9.23□□□□□ -0.93
CCDC149-206ENST00000508236 FGD4Q96M96 766 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 RPS6KC1Q96S38 1066 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 WDR18Q9BV38 432 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 KLHL25Q9H0H3 589 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 TRIM39Q9HCM9 518 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 SLC5A4Q9NY91 659 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 CYP46A1Q9Y6A2 500 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 SPATA31A3Q5VYP0 1347 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 CCDC171Q6TFL3 1326 aa9.23□□□□□ -0.93
CCDC149-206ENST00000508236 UBR2Q8IWV8 1755 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 XIRP1Q702N8 1843 aaKnown RBP9.22□□□□□ -0.93
CCDC149-206ENST00000508236 FANCGO15287 622 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 CBFA2T2O43439 604 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 AOC2O75106 756 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 CLEC3AO75596 197 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 CAPNS1P04632 268 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 MYL6BP14649 208 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 ZKSCAN1P17029 563 aaPredicted RBP9.22□□□□□ -0.93
CCDC149-206ENST00000508236 POU3F2P20265 443 aaPredicted RBP9.22□□□□□ -0.93
CCDC149-206ENST00000508236 MX2P20592 715 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 ALAS2P22557 587 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 PSMA5P28066 241 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 GBP1P32455 592 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 PTH1RQ03431 593 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 MTMR1Q13613 665 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 UBE4AQ14139 1066 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 SUZ12Q15022 739 aaKnown RBP9.22□□□□□ -0.93
CCDC149-206ENST00000508236 NECTIN1Q15223 517 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 DHCR24Q15392 516 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 RNF219Q5W0B1 726 aaPredicted RBP9.22□□□□□ -0.93
CCDC149-206ENST00000508236 RUFY3Q7L099 469 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 HID1Q8IV36 788 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 MRPL41Q8IXM3 137 aaKnown RBP9.22□□□□□ -0.93
CCDC149-206ENST00000508236 ZNF513Q8N8E2 541 aaPredicted RBP9.22□□□□□ -0.93
CCDC149-206ENST00000508236 CCDC74BQ96LY2 380 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 LGR4Q9BXB1 951 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 CCDC8Q9H0W5 538 aaPredicted RBP9.22□□□□□ -0.93
CCDC149-206ENST00000508236 ALDH8A1Q9H2A2 487 aaPredicted RBP9.22□□□□□ -0.93
CCDC149-206ENST00000508236 JPH1Q9HDC5 661 aaPredicted RBP9.22□□□□□ -0.93
CCDC149-206ENST00000508236 PDRG1Q9NUG6 133 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 CALCOCO1Q9P1Z2 691 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 NDOR1Q9UHB4 597 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 GDF2Q9UK05 429 aaPredicted RBP9.22□□□□□ -0.93
CCDC149-206ENST00000508236 NOL7Q9UMY1 257 aaKnown RBP9.22□□□□□ -0.93
CCDC149-206ENST00000508236 SMC3Q9UQE7 1217 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 ATP6V1DQ9Y5K8 247 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 RFX7Q2KHR2 1363 aa9.22□□□□□ -0.93
CCDC149-206ENST00000508236 ST8SIA5O15466 376 aa9.21□□□□□ -0.94
CCDC149-206ENST00000508236 CYP27B1O15528 508 aa9.21□□□□□ -0.94
CCDC149-206ENST00000508236 C6orf222P0C671 652 aaPredicted RBP9.21□□□□□ -0.94
CCDC149-206ENST00000508236 ZSCAN22P10073 491 aaPredicted RBP9.21□□□□□ -0.94
CCDC149-206ENST00000508236 CASTP20810 708 aaKnown RBP9.21□□□□□ -0.94
CCDC149-206ENST00000508236 RFX5P48382 616 aaPredicted RBP9.21□□□□□ -0.94
CCDC149-206ENST00000508236 ITKQ08881 620 aa9.21□□□□□ -0.94
CCDC149-206ENST00000508236 NMIQ13287 307 aaPredicted RBP9.21□□□□□ -0.94
CCDC149-206ENST00000508236 PCBP1Q15365 356 aaKnown RBP eCLIP9.21□□□□□ -0.94
CCDC149-206ENST00000508236 RABL6Q3YEC7 729 aaPredicted RBP9.21□□□□□ -0.94
CCDC149-206ENST00000508236 LHFPL2Q6ZUX7 228 aa9.21□□□□□ -0.94
CCDC149-206ENST00000508236 BRAPQ7Z569 592 aa9.21□□□□□ -0.94
CCDC149-206ENST00000508236 ADAT2Q7Z6V5 191 aaKnown RBP9.21□□□□□ -0.94
CCDC149-206ENST00000508236 CCDC144CPQ8IYA2 1237 aa9.21□□□□□ -0.94
CCDC149-206ENST00000508236 KLHL23Q8NBE8 558 aa9.21□□□□□ -0.94
CCDC149-206ENST00000508236 PLBD2Q8NHP8 589 aa9.21□□□□□ -0.94
CCDC149-206ENST00000508236 SLC7A14Q8TBB6 771 aa9.21□□□□□ -0.94
CCDC149-206ENST00000508236 MAP4K1Q92918 833 aa9.21□□□□□ -0.94
CCDC149-206ENST00000508236 KIFC2Q96AC6 838 aa9.21□□□□□ -0.94
CCDC149-206ENST00000508236 MTMR8Q96EF0 704 aa9.21□□□□□ -0.94
CCDC149-206ENST00000508236 JAKMIP1Q96N16 626 aaKnown RBP9.21□□□□□ -0.94
CCDC149-206ENST00000508236 AAASQ9NRG9 546 aa9.21□□□□□ -0.94
CCDC149-206ENST00000508236 ZIM2Q9NZV7 527 aa9.21□□□□□ -0.94
CCDC149-206ENST00000508236 USP16Q9Y5T5 823 aa9.21□□□□□ -0.94
CCDC149-206ENST00000508236 NUP188Q5SRE5 1749 aa9.21□□□□□ -0.94
CCDC149-206ENST00000508236 RPAP1Q9BWH6 1393 aaPredicted RBP9.21□□□□□ -0.94
CCDC149-206ENST00000508236 GLI3P10071 1580 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms