RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 CAND2O75155 1236 aa16.24■□□□□ 0.19
DDR1-260ENST00000507533 NR3C2P08235 984 aa16.24■□□□□ 0.19
DDR1-260ENST00000507533 GOLGA8HP0CJ92 632 aa16.24■□□□□ 0.19
DDR1-260ENST00000507533 VCPP55072 806 aaKnown RBP16.24■□□□□ 0.19
DDR1-260ENST00000507533 SIGLEC14Q08ET2 396 aa16.24■□□□□ 0.19
DDR1-260ENST00000507533 C16orf70Q9BSU1 422 aa16.24■□□□□ 0.19
DDR1-260ENST00000507533 RCAN3Q9UKA8 241 aa16.24■□□□□ 0.19
DDR1-260ENST00000507533 GGPS1O95749 300 aa16.23■□□□□ 0.19
DDR1-260ENST00000507533 MMP1P03956 469 aa16.23■□□□□ 0.19
DDR1-260ENST00000507533 SMIM10L2AP0DMW4 78 aa16.23■□□□□ 0.19
DDR1-260ENST00000507533 SMIM10L2BP0DMW5 78 aa16.23■□□□□ 0.19
DDR1-260ENST00000507533 AVPR2P30518 371 aa16.23■□□□□ 0.19
DDR1-260ENST00000507533 RRP1P56182 461 aaKnown RBP16.23■□□□□ 0.19
DDR1-260ENST00000507533 CBX2Q14781 532 aaPredicted RBP16.23■□□□□ 0.19
DDR1-260ENST00000507533 CDC37Q16543 378 aaPredicted RBP16.23■□□□□ 0.19
DDR1-260ENST00000507533 CELF3Q5SZQ8 465 aaKnown RBP16.23■□□□□ 0.19
DDR1-260ENST00000507533 GPATCH4Q5T3I0 446 aaKnown RBP16.23■□□□□ 0.19
DDR1-260ENST00000507533 VPS53Q5VIR6 699 aa16.23■□□□□ 0.19
DDR1-260ENST00000507533 CLP1Q92989 425 aaKnown RBP16.23■□□□□ 0.19
DDR1-260ENST00000507533 PPP2R3CQ969Q6 453 aa16.23■□□□□ 0.19
DDR1-260ENST00000507533 TTC14Q96N46 770 aa16.23■□□□□ 0.19
DDR1-260ENST00000507533 RNPEPQ9H4A4 650 aa16.23■□□□□ 0.19
DDR1-260ENST00000507533 PXMP2Q9NR77 195 aa16.23■□□□□ 0.19
DDR1-260ENST00000507533 CLEC1BQ9P126 229 aa16.23■□□□□ 0.19
DDR1-260ENST00000507533 MYO7AQ13402 2215 aa16.23■□□□□ 0.19
DDR1-260ENST00000507533 ADGRA3Q8IWK6 1321 aa16.22■□□□□ 0.19
DDR1-260ENST00000507533 H3BRB1 525 aa16.22■□□□□ 0.19
DDR1-260ENST00000507533 HOXC8P31273 242 aa16.22■□□□□ 0.19
DDR1-260ENST00000507533 CAMK1Q14012 370 aa16.22■□□□□ 0.19
DDR1-260ENST00000507533 SMRP1Q8NCR6 262 aa16.22■□□□□ 0.19
DDR1-260ENST00000507533 PLVAPQ9BX97 442 aa16.22■□□□□ 0.19
DDR1-260ENST00000507533 TUT1Q9H6E5 874 aaKnown RBP16.22■□□□□ 0.19
DDR1-260ENST00000507533 PLAGL2Q9UPG8 496 aa16.22■□□□□ 0.19
DDR1-260ENST00000507533 MRPL11Q9Y3B7 192 aaKnown RBP16.22■□□□□ 0.19
DDR1-260ENST00000507533 ZDBF2Q9HCK1 2354 aa16.21■□□□□ 0.19
DDR1-260ENST00000507533 H0Y858 1186 aa16.21■□□□□ 0.19
DDR1-260ENST00000507533 RGS20O76081 388 aa16.21■□□□□ 0.19
DDR1-260ENST00000507533 HSPD1P10809 573 aaKnown RBP16.21■□□□□ 0.19
DDR1-260ENST00000507533 MYCLP12524 364 aaPredicted RBP16.21■□□□□ 0.19
DDR1-260ENST00000507533 COASYQ13057 564 aa16.21■□□□□ 0.19
DDR1-260ENST00000507533 BTG3Q14201 252 aaPredicted RBP16.21■□□□□ 0.19
DDR1-260ENST00000507533 ALX1Q15699 326 aa16.21■□□□□ 0.19
DDR1-260ENST00000507533 KCNV1Q6PIU1 500 aa16.21■□□□□ 0.19
DDR1-260ENST00000507533 EFHBQ8N7U6 833 aa16.21■□□□□ 0.19
DDR1-260ENST00000507533 ASIC4Q96FT7 647 aa16.21■□□□□ 0.19
DDR1-260ENST00000507533 RPGRIP1Q96KN7 1286 aa16.21■□□□□ 0.19
DDR1-260ENST00000507533 RC3H2Q9HBD1 1191 aaKnown RBP16.21■□□□□ 0.19
DDR1-260ENST00000507533 TLR9Q9NR96 1032 aa16.21■□□□□ 0.19
DDR1-260ENST00000507533 TTC41PQ6P2S7 1318 aa16.2■□□□□ 0.18
DDR1-260ENST00000507533 RALGAPA2Q2PPJ7 1873 aa16.2■□□□□ 0.18
DDR1-260ENST00000507533 NLRC5Q86WI3 1866 aa16.2■□□□□ 0.18
DDR1-260ENST00000507533 CFBP00751 764 aa16.2■□□□□ 0.18
DDR1-260ENST00000507533 SP2Q02086 613 aa16.2■□□□□ 0.18
DDR1-260ENST00000507533 ADGRD2Q7Z7M1 963 aa16.2■□□□□ 0.18
DDR1-260ENST00000507533 ADGRF4Q8IZF3 695 aa16.2■□□□□ 0.18
DDR1-260ENST00000507533 PI4K2BQ8TCG2 481 aa16.2■□□□□ 0.18
DDR1-260ENST00000507533 PHF7Q9BWX1 381 aaPredicted RBP16.2■□□□□ 0.18
DDR1-260ENST00000507533 MLXIPQ9HAP2 919 aa16.2■□□□□ 0.18
DDR1-260ENST00000507533 SETD4Q9NVD3 440 aa16.2■□□□□ 0.18
DDR1-260ENST00000507533 USP15Q9Y4E8 981 aaPredicted RBP16.2■□□□□ 0.18
DDR1-260ENST00000507533 MYO15AQ9UKN7 3530 aa16.19■□□□□ 0.18
DDR1-260ENST00000507533 PROB1E7EW31 1015 aa16.19■□□□□ 0.18
DDR1-260ENST00000507533 FGAP02671 866 aa16.19■□□□□ 0.18
DDR1-260ENST00000507533 LGALS2P05162 132 aa16.19■□□□□ 0.18
DDR1-260ENST00000507533 GNAT1P11488 350 aa16.19■□□□□ 0.18
DDR1-260ENST00000507533 UBA1P22314 1058 aaKnown RBP16.19■□□□□ 0.18
DDR1-260ENST00000507533 DNAJB1P25685 340 aa16.19■□□□□ 0.18
DDR1-260ENST00000507533 NRIP1P48552 1158 aa16.19■□□□□ 0.18
DDR1-260ENST00000507533 QRICH1Q2TAL8 776 aa16.19■□□□□ 0.18
DDR1-260ENST00000507533 FAM26DQ5JW98 314 aa16.19■□□□□ 0.18
DDR1-260ENST00000507533 ASCL5Q7RTU5 278 aa16.19■□□□□ 0.18
DDR1-260ENST00000507533 P2RX5Q93086 422 aa16.19■□□□□ 0.18
DDR1-260ENST00000507533 ZNF689Q96CS4 500 aaPredicted RBP16.19■□□□□ 0.18
DDR1-260ENST00000507533 DCTPP1Q9H773 170 aa16.19■□□□□ 0.18
DDR1-260ENST00000507533 BARX2Q9UMQ3 279 aaPredicted RBP16.19■□□□□ 0.18
DDR1-260ENST00000507533 KIAA1217Q5T5P2 1943 aa16.18■□□□□ 0.18
DDR1-260ENST00000507533 ENPP3O14638 875 aa16.18■□□□□ 0.18
DDR1-260ENST00000507533 TGFB3P10600 412 aa16.18■□□□□ 0.18
DDR1-260ENST00000507533 ICAM3P32942 547 aa16.18■□□□□ 0.18
DDR1-260ENST00000507533 RBM23Q86U06 439 aaKnown RBP16.18■□□□□ 0.18
DDR1-260ENST00000507533 SPPL3Q8TCT6 385 aa16.18■□□□□ 0.18
DDR1-260ENST00000507533 PDCD2LQ9BRP1 358 aa16.18■□□□□ 0.18
DDR1-260ENST00000507533 KMT2EQ8IZD2 1858 aa16.18■□□□□ 0.18
DDR1-260ENST00000507533 DHX16O60231 1041 aaKnown RBP16.17■□□□□ 0.18
DDR1-260ENST00000507533 GLP2RO95838 553 aa16.17■□□□□ 0.18
DDR1-260ENST00000507533 CHRNA1P02708 482 aa16.17■□□□□ 0.18
DDR1-260ENST00000507533 ITGB1P05556 798 aa16.17■□□□□ 0.18
DDR1-260ENST00000507533 GHRP10912 638 aa16.17■□□□□ 0.18
DDR1-260ENST00000507533 HSD17B4P51659 736 aa16.17■□□□□ 0.18
DDR1-260ENST00000507533 NUBP1P53384 320 aa16.17■□□□□ 0.18
DDR1-260ENST00000507533 NAALADL2Q58DX5 795 aa16.17■□□□□ 0.18
DDR1-260ENST00000507533 ERMP1Q7Z2K6 904 aa16.17■□□□□ 0.18
DDR1-260ENST00000507533 VSIG10LQ86VR7 867 aa16.17■□□□□ 0.18
DDR1-260ENST00000507533 GPKOWQ92917 476 aaPredicted RBP eCLIP16.17■□□□□ 0.18
DDR1-260ENST00000507533 ZKSCAN3Q9BRR0 538 aa16.17■□□□□ 0.18
DDR1-260ENST00000507533 BCAS3Q9H6U6 928 aa16.17■□□□□ 0.18
DDR1-260ENST00000507533 VAT1LQ9HCJ6 419 aa16.17■□□□□ 0.18
DDR1-260ENST00000507533 TRPC6Q9Y210 931 aa16.17■□□□□ 0.18
DDR1-260ENST00000507533 MRPL42Q9Y6G3 142 aaKnown RBP16.17■□□□□ 0.18
DDR1-260ENST00000507533 ATG2AQ2TAZ0 1938 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms