RNA–Protein interactions for RNA: ENST00000507115.5

HSPA9-208, Transcript of heat shock protein family A (Hsp70) member 9, human

TSL 3

Gene HSPA9, Length 663 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HSPA9-208	ENST00000507115	CHAMP1	Q96JM3	812 aa		11.14	□□□□□ -0.63
HSPA9-208	ENST00000507115	ZNF396	Q96N95	335 aa	Predicted RBP	11.14	□□□□□ -0.63
HSPA9-208	ENST00000507115	TRERF1	Q96PN7	1200 aa		11.14	□□□□□ -0.63
HSPA9-208	ENST00000507115	PARK7	Q99497	189 aa	Known RBP	11.14	□□□□□ -0.63
HSPA9-208	ENST00000507115	TEX13B	Q9BXU2	312 aa		11.14	□□□□□ -0.63
HSPA9-208	ENST00000507115	TMEM260	Q9NX78	707 aa		11.14	□□□□□ -0.63
HSPA9-208	ENST00000507115	TFIP11	Q9UBB9	837 aa	Known RBP	11.14	□□□□□ -0.63
HSPA9-208	ENST00000507115	BAZ2B	Q9UIF8	2168 aa	Known RBP	11.14	□□□□□ -0.63
HSPA9-208	ENST00000507115	HSD17B4	P51659	736 aa		11.13	□□□□□ -0.63
HSPA9-208	ENST00000507115	UBE2S	Q16763	222 aa		11.13	□□□□□ -0.63
HSPA9-208	ENST00000507115		Q3C1V9	767 aa		11.13	□□□□□ -0.63
HSPA9-208	ENST00000507115	RILPL1	Q5EBL4	403 aa		11.13	□□□□□ -0.63
HSPA9-208	ENST00000507115	JAKMIP3	Q5VZ66	844 aa		11.13	□□□□□ -0.63
HSPA9-208	ENST00000507115	PIK3AP1	Q6ZUJ8	805 aa		11.13	□□□□□ -0.63
HSPA9-208	ENST00000507115	MCF2L2	Q86YR7	1114 aa		11.13	□□□□□ -0.63
HSPA9-208	ENST00000507115	REXO1	Q8N1G1	1221 aa	Known RBP	11.13	□□□□□ -0.63
HSPA9-208	ENST00000507115	TIFA	Q96CG3	184 aa		11.13	□□□□□ -0.63
HSPA9-208	ENST00000507115	GBP4	Q96PP9	640 aa		11.13	□□□□□ -0.63
HSPA9-208	ENST00000507115	SPATC1L	Q9H0A9	340 aa		11.13	□□□□□ -0.63
HSPA9-208	ENST00000507115	CDHR5	Q9HBB8	845 aa		11.13	□□□□□ -0.63
HSPA9-208	ENST00000507115	TXNRD2	Q9NNW7	524 aa		11.13	□□□□□ -0.63
HSPA9-208	ENST00000507115	CD320	Q9NPF0	282 aa		11.13	□□□□□ -0.63
HSPA9-208	ENST00000507115	PRKAG2	Q9UGJ0	569 aa		11.13	□□□□□ -0.63
HSPA9-208	ENST00000507115	CFAP45	Q9UL16	551 aa		11.13	□□□□□ -0.63
HSPA9-208	ENST00000507115	CCDC194	A0A1B0GVG4	234 aa		11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	NFIB	O00712	420 aa		11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	EDIL3	O43854	480 aa		11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	TLL1	O43897	1013 aa		11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	PEX10	O60683	326 aa		11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	CFB	P00751	764 aa		11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	FOS	P01100	380 aa	Predicted RBP	11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	POLR2M	P0CAP2	368 aa		11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	GCLC	P48506	637 aa	Predicted RBP	11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	TRAPPC10	P48553	1259 aa		11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	KRT85	P78386	507 aa		11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	AP3B2	Q13367	1082 aa		11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	PLS1	Q14651	629 aa		11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	NONO	Q15233	471 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	AAK1	Q2M2I8	961 aa		11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	MAP3K21	Q5TCX8	1036 aa		11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	CHST13	Q8NET6	341 aa		11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	USP28	Q96RU2	1077 aa		11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	PAGR1	Q9BTK6	254 aa		11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	MOV10L1	Q9BXT6	1211 aa	Known RBP	11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	RNF146	Q9NTX7	359 aa		11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	RTEL1	Q9NZ71	1219 aa		11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	MORF4L1	Q9UBU8	362 aa		11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	RABGEF1	Q9UJ41	708 aa		11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	RCOR1	Q9UKL0	485 aa		11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	NOL7	Q9UMY1	257 aa	Known RBP	11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	CNPY2	Q9Y2B0	182 aa		11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	CLIC4	Q9Y696	253 aa		11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	BAHCC1	Q9P281	2608 aa		11.12	□□□□□ -0.63
HSPA9-208	ENST00000507115	SLC25A27	O95847	323 aa		11.11	□□□□□ -0.63
HSPA9-208	ENST00000507115	COPB2	P35606	906 aa		11.11	□□□□□ -0.63
HSPA9-208	ENST00000507115	NASP	P49321	788 aa	Predicted RBP	11.11	□□□□□ -0.63
HSPA9-208	ENST00000507115	ERVK-9	P63128	1117 aa		11.11	□□□□□ -0.63
HSPA9-208	ENST00000507115	ERVK-24	P63145	666 aa		11.11	□□□□□ -0.63
HSPA9-208	ENST00000507115	ANO1	Q5XXA6	986 aa		11.11	□□□□□ -0.63
HSPA9-208	ENST00000507115	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
HSPA9-208	ENST00000507115	TBCK	Q8TEA7	893 aa		11.11	□□□□□ -0.63
HSPA9-208	ENST00000507115	CRYGN	Q8WXF5	182 aa		11.11	□□□□□ -0.63
HSPA9-208	ENST00000507115	PGBD1	Q96JS3	809 aa		11.11	□□□□□ -0.63
HSPA9-208	ENST00000507115	RNPC3	Q96LT9	517 aa	Known RBP	11.11	□□□□□ -0.63
HSPA9-208	ENST00000507115	ANO3	Q9BYT9	981 aa		11.11	□□□□□ -0.63
HSPA9-208	ENST00000507115	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.11	□□□□□ -0.63
HSPA9-208	ENST00000507115	HOMER2	Q9NSB8	354 aa		11.11	□□□□□ -0.63
HSPA9-208	ENST00000507115	POLR3E	Q9NVU0	708 aa		11.11	□□□□□ -0.63
HSPA9-208	ENST00000507115	PCDHB6	Q9Y5E3	794 aa		11.11	□□□□□ -0.63
HSPA9-208	ENST00000507115	SMCHD1	A6NHR9	2005 aa		11.11	□□□□□ -0.63
HSPA9-208	ENST00000507115	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	WNT7A	O00755	349 aa		11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	RGS20	O76081	388 aa		11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	YEATS4	O95619	227 aa		11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	IGFBP4	P22692	258 aa		11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	HOXA13	P31271	388 aa	Predicted RBP	11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	MCM4	P33991	863 aa		11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	USP11	P51784	963 aa		11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	EPHB4	P54760	987 aa		11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	RPS6	P62753	249 aa	Known RBP	11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	BAAT	Q14032	418 aa	Predicted RBP	11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	PTPA	Q15257	358 aa		11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	SF3A1	Q15459	793 aa	Known RBP	11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	INF2	Q27J81	1249 aa		11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	RNF207	Q6ZRF8	634 aa		11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	TMEM87A	Q8NBN3	555 aa		11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	LINC00301	Q8NCQ3	95 aa		11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	SHCBP1	Q8NEM2	672 aa		11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	GPRC5A	Q8NFJ5	357 aa		11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	SYTL5	Q8TDW5	730 aa	Predicted RBP	11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	UIMC1	Q96RL1	719 aa		11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	SENP6	Q9GZR1	1112 aa	Predicted RBP	11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	ACAD9	Q9H845	621 aa		11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	COL20A1	Q9P218	1284 aa		11.1	□□□□□ -0.63
HSPA9-208	ENST00000507115	KIAA1468	Q9P260	1216 aa		11.1	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms