RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 TXNP10599 105 aaKnown RBP10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 CIITAP33076 1130 aa10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 USP11P51784 963 aa10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 BEX3Q00994 111 aa10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 TNFAIP2Q03169 654 aa10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 ITGB3BPQ13352 177 aaPredicted RBP10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 MTMR1Q13613 665 aa10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 TTC38Q5R3I4 469 aa10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 MYSM1Q5VVJ2 828 aa10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 MSL3Q8N5Y2 521 aaKnown RBP10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 ZNF333Q96JL9 665 aa10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 DEFB118Q96PH6 123 aa10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 RNF208Q9H0X6 261 aa10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 AGO4Q9HCK5 861 aaKnown RBP10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 HMX1Q9NP08 348 aaPredicted RBP10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 VTA1Q9NP79 307 aa10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 DDX25Q9UHL0 483 aaKnown RBP10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 DDX41Q9UJV9 622 aaKnown RBP10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 CLIC4Q9Y696 253 aa10.03□□□□□ -0.8
SCAMP1-202ENST00000506858 B4DLN1 442 aa10.02□□□□□ -0.81
SCAMP1-202ENST00000506858 GGPS1O95749 300 aa10.02□□□□□ -0.81
SCAMP1-202ENST00000506858 UBA1P22314 1058 aaKnown RBP10.02□□□□□ -0.81
SCAMP1-202ENST00000506858 PKN2Q16513 984 aaKnown RBP10.02□□□□□ -0.81
SCAMP1-202ENST00000506858 TPRNQ4KMQ1 711 aa10.02□□□□□ -0.81
SCAMP1-202ENST00000506858 CYFIP1Q7L576 1253 aa10.02□□□□□ -0.81
SCAMP1-202ENST00000506858 TRMT44Q8IYL2 757 aaKnown RBP10.02□□□□□ -0.81
SCAMP1-202ENST00000506858 SCFD2Q8WU76 684 aa10.02□□□□□ -0.81
SCAMP1-202ENST00000506858 USP28Q96RU2 1077 aa10.02□□□□□ -0.81
SCAMP1-202ENST00000506858 MPHOSPH6Q99547 160 aaKnown RBP10.02□□□□□ -0.81
SCAMP1-202ENST00000506858 MAF1Q9H063 256 aa10.02□□□□□ -0.81
SCAMP1-202ENST00000506858 FAM184BQ9ULE4 1060 aa10.02□□□□□ -0.81
SCAMP1-202ENST00000506858 CYP3A7-CYP3A51PA0A087WV96 503 aa10.01□□□□□ -0.81
SCAMP1-202ENST00000506858 RBM47A0AV96 593 aaKnown RBP10.01□□□□□ -0.81
SCAMP1-202ENST00000506858 SEPT4O43236 478 aa10.01□□□□□ -0.81
SCAMP1-202ENST00000506858 KCNA2P16389 499 aa10.01□□□□□ -0.81
SCAMP1-202ENST00000506858 CYP3A7P24462 503 aa10.01□□□□□ -0.81
SCAMP1-202ENST00000506858 DNM1Q05193 864 aaKnown RBP10.01□□□□□ -0.81
SCAMP1-202ENST00000506858 ARHGAP1Q07960 439 aa10.01□□□□□ -0.81
SCAMP1-202ENST00000506858 TTLL4Q14679 1199 aa10.01□□□□□ -0.81
SCAMP1-202ENST00000506858 MCTP2Q6DN12 878 aa10.01□□□□□ -0.81
SCAMP1-202ENST00000506858 IQSEC1Q6DN90 963 aa10.01□□□□□ -0.81
SCAMP1-202ENST00000506858 NLRX1Q86UT6 975 aa10.01□□□□□ -0.81
SCAMP1-202ENST00000506858 C4orf32Q8N8J7 132 aa10.01□□□□□ -0.81
SCAMP1-202ENST00000506858 HAS1Q92839 578 aa10.01□□□□□ -0.81
SCAMP1-202ENST00000506858 ARMC5Q96C12 935 aa10.01□□□□□ -0.81
SCAMP1-202ENST00000506858 MBOAT7Q96N66 472 aa10.01□□□□□ -0.81
SCAMP1-202ENST00000506858 ZNF577Q9BSK1 485 aa10.01□□□□□ -0.81
SCAMP1-202ENST00000506858 DDX20Q9UHI6 824 aaKnown RBP10.01□□□□□ -0.81
SCAMP1-202ENST00000506858 GNEQ9Y223 722 aaKnown RBP10.01□□□□□ -0.81
SCAMP1-202ENST00000506858 LRRC37A2A6NM11 1700 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 DHX15O43143 795 aaKnown RBP10□□□□□ -0.81
SCAMP1-202ENST00000506858 FIBPO43427 364 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 CHMP2AO43633 222 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 AKR1A1P14550 325 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 ICAM3P32942 547 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 TXKP42681 527 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 PTGDRQ13258 359 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 SF3A1Q15459 793 aaKnown RBP10□□□□□ -0.81
SCAMP1-202ENST00000506858 IL17AQ16552 155 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 HSDL1Q3SXM5 330 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 GNPTABQ3T906 1256 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 Q4G0T1 1027 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 DUSP28Q4G0W2 176 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 KIAA1217Q5T5P2 1943 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 XRRA1Q6P2D8 792 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 OR6J1Q8NGC5 347 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 ETNPPLQ8TBG4 499 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 AFG1LQ8WV93 481 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 GPRASP2Q96D09 838 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 TMEM121BQ9BXQ6 578 aaPredicted RBP10□□□□□ -0.81
SCAMP1-202ENST00000506858 DOCK5Q9H7D0 1870 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 NOL7Q9UMY1 257 aaKnown RBP10□□□□□ -0.81
SCAMP1-202ENST00000506858 A0A087WWV3 80 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 LOC102724159A0A0B4J2E5 919 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 IPO5O00410 1097 aaKnown RBP10□□□□□ -0.81
SCAMP1-202ENST00000506858 CTAGE5O15320 804 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 MARCH6O60337 910 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 NEMFO60524 1076 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 CCNE2O96020 404 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 C6orf222P0C671 652 aaPredicted RBP10□□□□□ -0.81
SCAMP1-202ENST00000506858 RARBP10826 455 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 MARCKSP29966 332 aaPredicted RBP10□□□□□ -0.81
SCAMP1-202ENST00000506858 CHMP4BP1P59074 171 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 GRIN1Q05586 938 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 PWP2Q15269 919 aaKnown RBP10□□□□□ -0.81
SCAMP1-202ENST00000506858 CALCRLQ16602 461 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 CELF3Q5SZQ8 465 aaKnown RBP10□□□□□ -0.81
SCAMP1-202ENST00000506858 PPP4R3AQ6IN85 833 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 TRMT1LQ7Z2T5 733 aaKnown RBP10□□□□□ -0.81
SCAMP1-202ENST00000506858 BRAPQ7Z569 592 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 TLK2Q86UE8 772 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 TEX2Q8IWB9 1127 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 DHX37Q8IY37 1157 aaKnown RBP10□□□□□ -0.81
SCAMP1-202ENST00000506858 MLXIPQ9HAP2 919 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 GDPD2Q9HCC8 539 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 XPNPEP3Q9NQH7 507 aa10□□□□□ -0.81
SCAMP1-202ENST00000506858 EIF4ENIF1Q9NRA8 985 aaKnown RBP10□□□□□ -0.81
SCAMP1-202ENST00000506858 SYNRGQ9UMZ2 1314 aa9.99□□□□□ -0.81
SCAMP1-202ENST00000506858 EML1O00423 815 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms