RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 TRMT2BQ96GJ1 504 aaKnown RBP4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 FUBP3Q96I24 572 aaKnown RBP eCLIP4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 PSMD1Q99460 953 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 BOCQ9BWV1 1114 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 KRTAP4-2Q9BYR5 136 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 CDIP1Q9H305 208 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 ATP13A1Q9HD20 1204 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 LUC7LQ9NQ29 371 aaKnown RBP4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 ERVK13-1Q9NX77 482 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 BTG4Q9NY30 223 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 GOLGA6AQ9NYA3 693 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 TNFRSF10DQ9UBN6 386 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 FBXL7Q9UJT9 491 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 ZNF652Q9Y2D9 606 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 ZNF281Q9Y2X9 895 aa4.24□□□□□ -1.73
TRAPPC11-205ENST00000506426 PITPNM2Q9BZ72 1349 aa4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 KIF21AQ7Z4S6 1674 aa4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 KRT37O76014 449 aa4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 SNUPNO95149 360 aaKnown RBP4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 CT47B1P0C2W7 299 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 U2AF1L5P0DN76 240 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 KRT15P19012 456 aa4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 GNALP38405 381 aa4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 GRIK1P39086 918 aa4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 ERVK-21P61565 698 aa4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 U2AF1Q01081 240 aaKnown RBP eCLIP4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 KLF1Q13351 362 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 ABCB5Q2M3G0 1257 aa4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 FAM102BQ5T8I3 360 aa4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 BROXQ5VW32 411 aa4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 ARHGAP36Q6ZRI8 547 aa4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 C14orf80Q86SX3 495 aa4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 SLC51AQ86UW1 340 aa4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 CLRN3Q8NCR9 226 aa4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 TTC8Q8TAM2 541 aa4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 HRASLS5Q96KN8 279 aa4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 RTFDC1Q9BY42 306 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 SLC13A1Q9BZW2 595 aa4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 VTA1Q9NP79 307 aa4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 H2AFY2Q9P0M6 372 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 MARCH2Q9P0N8 246 aa4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 COA3Q9Y2R0 106 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 SPO11Q9Y5K1 396 aa4.23□□□□□ -1.73
TRAPPC11-205ENST00000506426 A0A1W2PQ45 241 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 A0A1W2PQY0 241 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 C22orf46C9J442 243 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 ZNF561-AS1K7EIQ3 104 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 DGKIO75912 1065 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 ABLIM3O94929 683 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 CFBP00751 764 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 KRT18P05783 430 aaKnown RBP4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 ZBTB48P10074 688 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 COL6A2P12110 1019 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 LSP1P33241 339 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 JAM2P57087 298 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 IRF9Q00978 393 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 MLC1Q15049 377 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 INAVAQ3KP66 663 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 CREB3L3Q68CJ9 461 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 NXNQ6DKJ4 435 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 PGM2L1Q6PCE3 622 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 HHIPL2Q6UWX4 724 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 NLRP10Q86W26 655 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 TCEAL8Q8IYN2 117 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 Q8N1Y9 231 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 CBARPQ8N350 705 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 NLGN2Q8NFZ4 835 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 JPH3Q8WXH2 748 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 EPB41L1Q9H4G0 881 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 SMURF1Q9HCE7 757 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 PIM2Q9P1W9 311 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 GULP1Q9UBP9 304 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 IP6K2Q9UHH9 426 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 VAV3Q9UKW4 847 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 NOB1Q9ULX3 412 aaKnown RBP4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 LUC7L2Q9Y383 392 aaKnown RBP4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 NOC2LQ9Y3T9 749 aaKnown RBP4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 NUB1Q9Y5A7 615 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 MRFAP1Q9Y605 127 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 X6R8D5 127 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 LAMC3Q9Y6N6 1575 aa4.22□□□□□ -1.73
TRAPPC11-205ENST00000506426 A0A1W2PQ27 194 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 A0A1W2PQ64 194 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 A0A1W2PQC6 194 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 A0A1W2PQD8 194 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 PLEKHD1A6NEE1 506 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 FADS2P1A8MWK0 482 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 KRIT1O00522 736 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 TPD52L2O43399 206 aaKnown RBP4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 TGM5O43548 720 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 PLIN1O60240 522 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 HIP1RO75146 1068 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 PEX14O75381 377 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 MT-CO1P00395 513 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 FUCA1P04066 466 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 AMY2AP04746 511 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 FOSL1P15407 271 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 SLC9A1P19634 815 aa4.21□□□□□ -1.74
TRAPPC11-205ENST00000506426 AMY2BP19961 511 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms