RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 ACTN1P12814 892 aa16.56■□□□□ 0.24
CDC42SE2-209ENST00000506419 ITGB5P18084 799 aa16.56■□□□□ 0.24
CDC42SE2-209ENST00000506419 MBTPS1Q14703 1052 aa16.56■□□□□ 0.24
CDC42SE2-209ENST00000506419 ZNF618Q5T7W0 954 aa16.56■□□□□ 0.24
CDC42SE2-209ENST00000506419 SYNE3Q6ZMZ3 975 aa16.56■□□□□ 0.24
CDC42SE2-209ENST00000506419 CCDC155Q8N6L0 562 aa16.56■□□□□ 0.24
CDC42SE2-209ENST00000506419 SENP7Q9BQF6 1050 aa16.56■□□□□ 0.24
CDC42SE2-209ENST00000506419 COL25A1Q9BXS0 654 aaPredicted RBP16.56■□□□□ 0.24
CDC42SE2-209ENST00000506419 RNPEPQ9H4A4 650 aa16.56■□□□□ 0.24
CDC42SE2-209ENST00000506419 TUT1Q9H6E5 874 aaKnown RBP16.56■□□□□ 0.24
CDC42SE2-209ENST00000506419 V9GY48 417 aaPredicted RBP16.56■□□□□ 0.24
CDC42SE2-209ENST00000506419 CUL9Q8IWT3 2517 aa16.56■□□□□ 0.24
CDC42SE2-209ENST00000506419 CDC27P30260 824 aa16.55■□□□□ 0.24
CDC42SE2-209ENST00000506419 HOXC8P31273 242 aa16.55■□□□□ 0.24
CDC42SE2-209ENST00000506419 WWC2Q6AWC2 1192 aa16.55■□□□□ 0.24
CDC42SE2-209ENST00000506419 HEATR3Q7Z4Q2 680 aa16.55■□□□□ 0.24
CDC42SE2-209ENST00000506419 PHOSPHO2Q8TCD6 241 aa16.55■□□□□ 0.24
CDC42SE2-209ENST00000506419 PRDM6Q9NQX0 595 aa16.55■□□□□ 0.24
CDC42SE2-209ENST00000506419 PCDHA6Q9UN73 950 aa16.55■□□□□ 0.24
CDC42SE2-209ENST00000506419 PCDHA8Q9Y5H6 950 aa16.55■□□□□ 0.24
CDC42SE2-209ENST00000506419 UBIAD1Q9Y5Z9 338 aa16.55■□□□□ 0.24
CDC42SE2-209ENST00000506419 TET1Q8NFU7 2136 aa16.55■□□□□ 0.24
CDC42SE2-209ENST00000506419 SCN5AQ14524 2016 aa16.55■□□□□ 0.24
CDC42SE2-209ENST00000506419 RFXAPO00287 272 aa16.54■□□□□ 0.24
CDC42SE2-209ENST00000506419 TREHO43280 583 aa16.54■□□□□ 0.24
CDC42SE2-209ENST00000506419 ZBTB43O43298 467 aa16.54■□□□□ 0.24
CDC42SE2-209ENST00000506419 SMIM10L2AP0DMW4 78 aa16.54■□□□□ 0.24
CDC42SE2-209ENST00000506419 SMIM10L2BP0DMW5 78 aa16.54■□□□□ 0.24
CDC42SE2-209ENST00000506419 KCNA2P16389 499 aa16.54■□□□□ 0.24
CDC42SE2-209ENST00000506419 UTP14CQ5TAP6 766 aaKnown RBP16.54■□□□□ 0.24
CDC42SE2-209ENST00000506419 TMCO2Q7Z6W1 182 aaPredicted RBP16.54■□□□□ 0.24
CDC42SE2-209ENST00000506419 NLRX1Q86UT6 975 aa16.54■□□□□ 0.24
CDC42SE2-209ENST00000506419 SERINC5Q86VE9 423 aa16.54■□□□□ 0.24
CDC42SE2-209ENST00000506419 TRIM50Q86XT4 487 aa16.54■□□□□ 0.24
CDC42SE2-209ENST00000506419 HERC6Q8IVU3 1022 aa16.54■□□□□ 0.24
CDC42SE2-209ENST00000506419 CCDC136Q96JN2 1154 aa16.54■□□□□ 0.24
CDC42SE2-209ENST00000506419 USP26Q9BXU7 913 aa16.54■□□□□ 0.24
CDC42SE2-209ENST00000506419 OSBPL7Q9BZF2 842 aa16.54■□□□□ 0.24
CDC42SE2-209ENST00000506419 SETD4Q9NVD3 440 aa16.54■□□□□ 0.24
CDC42SE2-209ENST00000506419 MYH7BA7E2Y1 1941 aa16.53■□□□□ 0.24
CDC42SE2-209ENST00000506419 CNTNAP5Q8WYK1 1306 aa16.53■□□□□ 0.24
CDC42SE2-209ENST00000506419 KLF18A0A0U1RQI7 1052 aa16.53■□□□□ 0.24
CDC42SE2-209ENST00000506419 GSTTP1A0A1W2PQM5 241 aa16.53■□□□□ 0.24
CDC42SE2-209ENST00000506419 C17orf102A2RUQ5 167 aa16.53■□□□□ 0.24
CDC42SE2-209ENST00000506419 NOP56O00567 594 aaKnown RBP16.53■□□□□ 0.24
CDC42SE2-209ENST00000506419 CA3P07451 260 aa16.53■□□□□ 0.24
CDC42SE2-209ENST00000506419 ADD1P35611 737 aaKnown RBP16.53■□□□□ 0.24
CDC42SE2-209ENST00000506419 SP4Q02446 784 aa16.53■□□□□ 0.24
CDC42SE2-209ENST00000506419 KRT32Q14532 448 aa16.53■□□□□ 0.24
CDC42SE2-209ENST00000506419 RTN1Q16799 776 aa16.53■□□□□ 0.24
CDC42SE2-209ENST00000506419 CYP2W1Q8TAV3 490 aa16.53■□□□□ 0.24
CDC42SE2-209ENST00000506419 PPM1EQ8WY54 764 aa16.53■□□□□ 0.24
CDC42SE2-209ENST00000506419 ATP6V0A1Q93050 837 aa16.53■□□□□ 0.24
CDC42SE2-209ENST00000506419 SLC9A7Q96T83 725 aa16.53■□□□□ 0.24
CDC42SE2-209ENST00000506419 GAS2L1Q99501 681 aaPredicted RBP16.53■□□□□ 0.24
CDC42SE2-209ENST00000506419 JADE2Q9NQC1 790 aa16.53■□□□□ 0.24
CDC42SE2-209ENST00000506419 RBM28Q9NW13 759 aaKnown RBP16.53■□□□□ 0.24
CDC42SE2-209ENST00000506419 SNX14Q9Y5W7 946 aa16.53■□□□□ 0.24
CDC42SE2-209ENST00000506419 MYO9BQ13459 2157 aa16.53■□□□□ 0.24
CDC42SE2-209ENST00000506419 BAIAP3O94812 1187 aa16.52■□□□□ 0.24
CDC42SE2-209ENST00000506419 IGFBP4P22692 258 aa16.52■□□□□ 0.24
CDC42SE2-209ENST00000506419 HSPA4P34932 840 aa16.52■□□□□ 0.24
CDC42SE2-209ENST00000506419 THPOP40225 353 aa16.52■□□□□ 0.24
CDC42SE2-209ENST00000506419 WDR5P61964 334 aaKnown RBP16.52■□□□□ 0.24
CDC42SE2-209ENST00000506419 ADAM17P78536 824 aa16.52■□□□□ 0.24
CDC42SE2-209ENST00000506419 DEFB103AP81534 67 aa16.52■□□□□ 0.24
CDC42SE2-209ENST00000506419 PPP2R2DQ66LE6 453 aa16.52■□□□□ 0.24
CDC42SE2-209ENST00000506419 CNKSR3Q6P9H4 555 aa16.52■□□□□ 0.24
CDC42SE2-209ENST00000506419 SPRED2Q7Z698 418 aa16.52■□□□□ 0.24
CDC42SE2-209ENST00000506419 GPRASP2Q96D09 838 aa16.52■□□□□ 0.24
CDC42SE2-209ENST00000506419 CERS4Q9HA82 394 aa16.52■□□□□ 0.24
CDC42SE2-209ENST00000506419 TRIP12Q14669 1992 aaPredicted RBP16.51■□□□□ 0.23
CDC42SE2-209ENST00000506419 EPOPA6NHQ4 379 aa16.51■□□□□ 0.23
CDC42SE2-209ENST00000506419 GOLGA8AA7E2F4 631 aa16.51■□□□□ 0.23
CDC42SE2-209ENST00000506419 GOLGA8BA8MQT2 603 aa16.51■□□□□ 0.23
CDC42SE2-209ENST00000506419 RSPH10B2B2RC85 870 aa16.51■□□□□ 0.23
CDC42SE2-209ENST00000506419 STXBP3O00186 592 aa16.51■□□□□ 0.23
CDC42SE2-209ENST00000506419 ADAMTS3O15072 1205 aa16.51■□□□□ 0.23
CDC42SE2-209ENST00000506419 PARNO95453 639 aaKnown RBP16.51■□□□□ 0.23
CDC42SE2-209ENST00000506419 RSPH10BP0C881 870 aa16.51■□□□□ 0.23
CDC42SE2-209ENST00000506419 TAP1Q03518 808 aa16.51■□□□□ 0.23
CDC42SE2-209ENST00000506419 APOBRQ0VD83 1088 aa16.51■□□□□ 0.23
CDC42SE2-209ENST00000506419 CCDC85BQ15834 202 aaPredicted RBP16.51■□□□□ 0.23
CDC42SE2-209ENST00000506419 Q6ZUG5 572 aa16.51■□□□□ 0.23
CDC42SE2-209ENST00000506419 PGBD1Q96JS3 809 aa16.51■□□□□ 0.23
CDC42SE2-209ENST00000506419 RIC8AQ9NPQ8 531 aa16.51■□□□□ 0.23
CDC42SE2-209ENST00000506419 PKD2L1Q9P0L9 805 aa16.51■□□□□ 0.23
CDC42SE2-209ENST00000506419 LCHNA4D1U4 455 aa16.5■□□□□ 0.23
CDC42SE2-209ENST00000506419 SMCO2A6NFE2 343 aa16.5■□□□□ 0.23
CDC42SE2-209ENST00000506419 SPDYE3A6NKU9 549 aa16.5■□□□□ 0.23
CDC42SE2-209ENST00000506419 HMGB1P09429 215 aaKnown RBP16.5■□□□□ 0.23
CDC42SE2-209ENST00000506419 NAPAP54920 295 aa16.5■□□□□ 0.23
CDC42SE2-209ENST00000506419 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.5■□□□□ 0.23
CDC42SE2-209ENST00000506419 GIMAP8Q8ND71 665 aaPredicted RBP16.5■□□□□ 0.23
CDC42SE2-209ENST00000506419 DBF4BQ8NFT6 615 aa16.5■□□□□ 0.23
CDC42SE2-209ENST00000506419 SEPT1Q8WYJ6 367 aa16.5■□□□□ 0.23
CDC42SE2-209ENST00000506419 JAKMIP1Q96N16 626 aaKnown RBP16.5■□□□□ 0.23
CDC42SE2-209ENST00000506419 MXRA8Q9BRK3 442 aa16.5■□□□□ 0.23
CDC42SE2-209ENST00000506419 TMEM260Q9NX78 707 aa16.5■□□□□ 0.23
CDC42SE2-209ENST00000506419 BARHL2Q9NY43 387 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms