RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 SSRP1Q08945 709 aaKnown RBP17.76■□□□□ 0.43
MED28-204ENST00000506409 PTGISQ16647 500 aa17.76■□□□□ 0.43
MED28-204ENST00000506409 JAKMIP3Q5VZ66 844 aa17.76■□□□□ 0.43
MED28-204ENST00000506409 CCDC148Q8NFR7 591 aa17.76■□□□□ 0.43
MED28-204ENST00000506409 IL17RAQ96F46 866 aa17.76■□□□□ 0.43
MED28-204ENST00000506409 RNPC3Q96LT9 517 aaKnown RBP17.76■□□□□ 0.43
MED28-204ENST00000506409 GPR20Q99678 358 aa17.76■□□□□ 0.43
MED28-204ENST00000506409 C16orf70Q9BSU1 422 aa17.76■□□□□ 0.43
MED28-204ENST00000506409 WNT8AQ9H1J5 351 aa17.76■□□□□ 0.43
MED28-204ENST00000506409 PKD2L1Q9P0L9 805 aa17.76■□□□□ 0.43
MED28-204ENST00000506409 SZT2Q5T011 3432 aa17.75■□□□□ 0.43
MED28-204ENST00000506409 MAFGO15525 162 aa17.75■□□□□ 0.43
MED28-204ENST00000506409 ATP9AO75110 1047 aa17.75■□□□□ 0.43
MED28-204ENST00000506409 LGALS2P05162 132 aa17.75■□□□□ 0.43
MED28-204ENST00000506409 ANKRD1Q15327 319 aa17.75■□□□□ 0.43
MED28-204ENST00000506409 MCTP2Q6DN12 878 aa17.75■□□□□ 0.43
MED28-204ENST00000506409 GDF6Q6KF10 455 aaPredicted RBP17.75■□□□□ 0.43
MED28-204ENST00000506409 REXO1Q8N1G1 1221 aaKnown RBP17.75■□□□□ 0.43
MED28-204ENST00000506409 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.75■□□□□ 0.43
MED28-204ENST00000506409 MXRA8Q9BRK3 442 aa17.75■□□□□ 0.43
MED28-204ENST00000506409 SLKQ9H2G2 1235 aaPredicted RBP17.75■□□□□ 0.43
MED28-204ENST00000506409 VPS54Q9P1Q0 977 aa17.75■□□□□ 0.43
MED28-204ENST00000506409 HDAC6Q9UBN7 1215 aa17.75■□□□□ 0.43
MED28-204ENST00000506409 GTF2IRD1Q9UHL9 959 aa17.75■□□□□ 0.43
MED28-204ENST00000506409 DOCK5Q9H7D0 1870 aa17.75■□□□□ 0.43
MED28-204ENST00000506409 H3BRB1 525 aa17.74■□□□□ 0.43
MED28-204ENST00000506409 DEXIO95424 95 aa17.74■□□□□ 0.43
MED28-204ENST00000506409 ACRP10323 421 aa17.74■□□□□ 0.43
MED28-204ENST00000506409 ZNF76P36508 570 aa17.74■□□□□ 0.43
MED28-204ENST00000506409 AK2P54819 239 aa17.74■□□□□ 0.43
MED28-204ENST00000506409 ARHGAP4P98171 946 aa17.74■□□□□ 0.43
MED28-204ENST00000506409 CEP55Q53EZ4 464 aa17.74■□□□□ 0.43
MED28-204ENST00000506409 PSRC1Q6PGN9 363 aaPredicted RBP17.74■□□□□ 0.43
MED28-204ENST00000506409 CYP2W1Q8TAV3 490 aa17.74■□□□□ 0.43
MED28-204ENST00000506409 BICD2Q8TD16 824 aa17.74■□□□□ 0.43
MED28-204ENST00000506409 TUT1Q9H6E5 874 aaKnown RBP17.74■□□□□ 0.43
MED28-204ENST00000506409 IL23AQ9NPF7 189 aa17.74■□□□□ 0.43
MED28-204ENST00000506409 SH3GLB2Q9NR46 395 aa17.74■□□□□ 0.43
MED28-204ENST00000506409 KCNH7Q9NS40 1196 aa17.74■□□□□ 0.43
MED28-204ENST00000506409 TPCN1Q9ULQ1 816 aa17.74■□□□□ 0.43
MED28-204ENST00000506409 PITPNM1O00562 1244 aa17.73■□□□□ 0.43
MED28-204ENST00000506409 ADAMTS3O15072 1205 aa17.73■□□□□ 0.43
MED28-204ENST00000506409 CDKL5O76039 1030 aa17.73■□□□□ 0.43
MED28-204ENST00000506409 SCRN1Q12765 414 aa17.73■□□□□ 0.43
MED28-204ENST00000506409 BFSP2Q13515 415 aa17.73■□□□□ 0.43
MED28-204ENST00000506409 TMEM240Q5SV17 173 aa17.73■□□□□ 0.43
MED28-204ENST00000506409 GPR153Q6NV75 609 aa17.73■□□□□ 0.43
MED28-204ENST00000506409 C16orf59Q7L2K0 433 aa17.73■□□□□ 0.43
MED28-204ENST00000506409 CCDC155Q8N6L0 562 aa17.73■□□□□ 0.43
MED28-204ENST00000506409 RETREG2Q8NC44 543 aa17.73■□□□□ 0.43
MED28-204ENST00000506409 SCLYQ96I15 445 aa17.73■□□□□ 0.43
MED28-204ENST00000506409 ZNF215Q9UL58 517 aaPredicted RBP17.73■□□□□ 0.43
MED28-204ENST00000506409 TELO2Q9Y4R8 837 aa17.73■□□□□ 0.43
MED28-204ENST00000506409 PFKFB2O60825 505 aa17.72■□□□□ 0.43
MED28-204ENST00000506409 NEK4P51957 841 aa17.72■□□□□ 0.43
MED28-204ENST00000506409 NLRP5P59047 1200 aa17.72■□□□□ 0.43
MED28-204ENST00000506409 C8orf34Q49A92 452 aa17.72■□□□□ 0.43
MED28-204ENST00000506409 UTP14CQ5TAP6 766 aaKnown RBP17.72■□□□□ 0.43
MED28-204ENST00000506409 ZNF365Q70YC5 407 aa17.72■□□□□ 0.43
MED28-204ENST00000506409 TRIM50Q86XT4 487 aa17.72■□□□□ 0.43
MED28-204ENST00000506409 CAGE1Q8TC20 777 aa17.72■□□□□ 0.43
MED28-204ENST00000506409 RASGRP4Q8TDF6 673 aa17.72■□□□□ 0.43
MED28-204ENST00000506409 CTAGE1Q96RT6 745 aa17.72■□□□□ 0.43
MED28-204ENST00000506409 LAMA2P24043 3122 aaKnown RBP17.72■□□□□ 0.43
MED28-204ENST00000506409 MEIS1O00470 390 aa17.71■□□□□ 0.43
MED28-204ENST00000506409 ARP10275 920 aa17.71■□□□□ 0.43
MED28-204ENST00000506409 TCF7P36402 384 aaPredicted RBP17.71■□□□□ 0.43
MED28-204ENST00000506409 RPUSD2Q8IZ73 545 aaKnown RBP17.71■□□□□ 0.43
MED28-204ENST00000506409 CRYGNQ8WXF5 182 aa17.71■□□□□ 0.43
MED28-204ENST00000506409 SEPT1Q8WYJ6 367 aa17.71■□□□□ 0.43
MED28-204ENST00000506409 SDF4Q9BRK5 362 aa17.71■□□□□ 0.43
MED28-204ENST00000506409 JPH1Q9HDC5 661 aaPredicted RBP17.71■□□□□ 0.43
MED28-204ENST00000506409 FAM86B1E9PN63 330 aa17.7■□□□□ 0.42
MED28-204ENST00000506409 FGBP02675 491 aa17.7■□□□□ 0.42
MED28-204ENST00000506409 CYP3A4P08684 503 aa17.7■□□□□ 0.42
MED28-204ENST00000506409 FAM86B2P0C5J1 330 aa17.7■□□□□ 0.42
MED28-204ENST00000506409 IQCF3P0C7M6 154 aa17.7■□□□□ 0.42
MED28-204ENST00000506409 SMIM10L2AP0DMW4 78 aa17.7■□□□□ 0.42
MED28-204ENST00000506409 SMIM10L2BP0DMW5 78 aa17.7■□□□□ 0.42
MED28-204ENST00000506409 SMAD3P84022 425 aaKnown RBP17.7■□□□□ 0.42
MED28-204ENST00000506409 ZNF200P98182 395 aaPredicted RBP17.7■□□□□ 0.42
MED28-204ENST00000506409 PTK7Q13308 1070 aa17.7■□□□□ 0.42
MED28-204ENST00000506409 NIPA1Q7RTP0 329 aa17.7■□□□□ 0.42
MED28-204ENST00000506409 PLA2G4DQ86XP0 818 aa17.7■□□□□ 0.42
MED28-204ENST00000506409 AFAP1L1Q8TED9 768 aa17.7■□□□□ 0.42
MED28-204ENST00000506409 DHX38Q92620 1227 aaKnown RBP17.7■□□□□ 0.42
MED28-204ENST00000506409 AGO4Q9HCK5 861 aaKnown RBP17.7■□□□□ 0.42
MED28-204ENST00000506409 SLC9A2Q9UBY0 812 aa17.7■□□□□ 0.42
MED28-204ENST00000506409 NFASCO94856 1347 aa17.7■□□□□ 0.42
MED28-204ENST00000506409 GSTTP1A0A1W2PQM5 241 aa17.69■□□□□ 0.42
MED28-204ENST00000506409 C17orf102A2RUQ5 167 aa17.69■□□□□ 0.42
MED28-204ENST00000506409 PFKMP08237 780 aa17.69■□□□□ 0.42
MED28-204ENST00000506409 RFC2P35250 354 aa17.69■□□□□ 0.42
MED28-204ENST00000506409 ITGB3BPQ13352 177 aaPredicted RBP17.69■□□□□ 0.42
MED28-204ENST00000506409 HIC1Q14526 733 aa17.69■□□□□ 0.42
MED28-204ENST00000506409 DEFB128Q7Z7B8 93 aa17.69■□□□□ 0.42
MED28-204ENST00000506409 FAM177A1Q8N128 213 aaPredicted RBP17.69■□□□□ 0.42
MED28-204ENST00000506409 DEFB123Q8N688 67 aa17.69■□□□□ 0.42
MED28-204ENST00000506409 AIFM3Q96NN9 605 aa17.69■□□□□ 0.42
MED28-204ENST00000506409 MTIF3Q9H2K0 278 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms